Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001741.1

Orthogroup ID

OG0010084

Physical Location & Seq

Genomic Coordinates Forward (+)

38534 .. 43017

Gene Structure 4484 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001741.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3003 bp

atgtgccaggtggccatcgccgtcgatatgagccgctgtgccgcttcgcctcccaatctgtgccccctccagttctcaggtagccccgccaagctattcggattcgggttcgacattcagaagaaggaccggctcaagaggcggctcaagttcgtcgtcggtgcggagctgtccaagccattctctctcagtttcggcttggactctcagggctatcagcttcatgatccgtcgcagtcgcggaggattggccctgttcctggggatattgcagaaattgaagcctattgtagaatttttcgaagtgctgaacgactacatactgcattgatggagacattgtgcaatccggtgaccggggtgtgcagtgtttactatgacttcccatcggaggaaaagccgctcttggaggataagattgtgtctgtgattggttgcatgatgtcactgttgaacaaagcaagggaggatgtgctttcgggaagatcagccattatgagctcctttcgaggagttgtggatgtcgctgaggtggaggaggacatgcttcctccacttgctgttttcaggagtgagctgaagaggtgttgcgagagcttgcacgttgcgcttgaggactggttgatgcctggggatgaccagagcttggatgtgtggaggaaacttcagaggctgaagaatgtgtgttatgattccggttttccacgcgaggaggattatccgtgcaatacgctttttgctaattggactcctgtttacttatcctcttctagagaggatgttaggtccgaagattcagaggtagcgttttggaggggtggccaggtaacagaagaaggtctggagtggttactggagaagggatttaaaactcttgttgatcttagggcagagattgtaaaagacaatatttatcaggcagccgtagatgatgctattgcatcagggaaggtgaaattgatcagaattccagttgaagttgggactgcaccttcaatggagcaggttgagaaattcgcaagtttggtttcagattgcagcaaaaacccaatctatcttcatagcaaggaaggtctctggagaacatctgccatggtttccagatggaggcagcacttgactcgccgtgctgttcaggttgtctccaagcagtcggtttctcttaatggagaggttgaaaaaccctcaactatgcagaaaagttccctccttgaaaagaagaatgaatcactggacacaattcatggttcaaatgggttgctacaaaaaaatgattctttagacagggatgaagcaaatctaaatgggacctgcaatggccttatatctatccaaggtttgacatcagttgaatcagatgaaagtggggaaaaacctttggtgaacttctgcagggaagttgaccccctgaatgctcaggttcctccttgcaatattttctcaagaaaagaaatgtccaggtttcttgagagaaaaaatattgcaccactcacttattttaattatcagttaaataggttgaaggtattaccaatttccaaatatatgaatactaagataatgtggagaggtgagattgttgatactgattcagtgcgggaggttgtggaggcagaaaattccaatgggatacctgatgcagaacatctgcttccagagttccagatctctgcttctggcaatgggaagtatttgaccggtgttggtaatggttctgtaactgcagtcgtaaatggatttggtgaaggggagaaaggttccttgttagccactaatttatctactaacgcgagcaacaatcaatctgagagtgtcttatctaaagcagtgaaggaggaaaggaagagtaatggtagagcccctttagtttcaagtgatgatgaattgggatcaattgaaggagatatgtgtgcttctgcaactggggttgtaagggtgcagtcaagaaagaaagcagagatgtttttagtacgaacagatggattctcttgtacccgagaaaaagtgacagaatcctccctggccttcactcatccaagtactcagcaacaaatgcttatgtggaaatctacaccaaagacagtattagtgttaaagaagcttgggcatgagcttatggaacaagctaaagaggttgtctccttcttgtattaccaagagaaaatgaatgttctggtggaacctgacgtgcatgatgtatttgctagaatcccaggttttggatttgttcagaccttctacacccaagataccggtgatctgcatgagagggttgattttgtggcatgtctgggaggggatggggtaatactccatgcatcaaatctattcaaaggtgctgtgccccccatcgtatcatttaatcttggatctcttggatttttgacttcccatacttttgatgactacaggcaggacttaagacaggttatccatggaaataacacaagtgatggtgtttatataactctcagaatgcgtctcaggtgtgaaatttttcgaaatggtaaagcgatgcctggaaaggtatttgatgttttgaatgaaatagttgttgatcgaggttcgaatccatacctttctaagattgaatgttatgaacgtgaccagcttataaccaaggtccaaggtgatggtgtcattgtagccacacctacaggaagtactgcttattctacagctgcaggaggttccatggtgcatccaaatgttccttgcatgttgtttacgccaatctgcccacactccctctcatttagaccagttatacttccagattctgcaagccttgaattaaagattccagaggatgctcgaagcaatgcctgggtttcttttgatgggaagagaaggcagcagctctcaaggggagactctgttcgaatagctatgagccaacacccacttccaacagtcaacaagcgtgaccagacaggggactggtttcgaagcttgattcgttgcctaaattggaatgagaggctagatcaaaaggccctttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NAD_kinase

Protein Analysis

1000

Amino Acids

111.29

Weight (kDa)

5.98

Isoelectric Point (pI)

41.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21640 AT1G21640
fragaria_vesca	FvH4_2g27820 FvH4_2g27820
malus_domestica	MD08G1160800.v1.1
prunus_persica	Prupe.1G489900_v2.0.a1 Prupe.1G489900_v2.0.a1 Prupe.1G489900_v2.0.a1
pyrus_communis	pycom348g00070
rosa_chinensis	RchiOBHm_Chr6g0296671
rosa_laevigata	RLG00000011671
rosa_multiflora	Rmu_sc0001741.1_g000009
rosa_roxburghii	Rroxscaffold_7G00171270
rosa_rugosa	Rorug06G0264100 Rorug06G0264100
rosa_samantha	Rh6AG375900 Rh6BG384200 Rh6CG389300 Rh6DG376700
rosa_wichuraiana	Rw6G032770 Rw6G032860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2615
Acc36I	ACCTGC	2 cut(s)	994, 1319
AccB7I	CCANNNNNTGG	2 cut(s)	646, 2219
AccBSI	CCGCTC	1 cut(s)	403
AccII	CGCG	3 cut(s)	241, 708, 1790
AciI	CCGC	8 cut(s)	34, 42, 87, 142, 164, 241, 401, 1597
AclWI	GGATC	3 cut(s)	221, 1897, 2377
AcoI	YGGCCR	2 cut(s)	12, 820
AcsI	RAATTY	5 cut(s)	294, 966, 1013, 1618, 2493
AcuI	CTGAAG	3 cut(s)	599, 650, 695
AfaI	GTAC	4 cut(s)	1971, 1993, 2041, 2665
AfiI	CCNNNNNNNGG	7 cut(s)	260, 356, 391, 646, 1107, 2219, 2935
AflII	CTTAAG	1 cut(s)	2419
AgeI	ACCGGT	2 cut(s)	1697, 2252
AjiI	CACGTC	1 cut(s)	2188
AjnI	CCWGG	9 cut(s)	6, 259, 628, 822, 1457, 2019, 2212, 2518, 2825
AjuI	GAANNNNNNNTTGG	2 cut(s)	2889, 2921
AloI	GAACNNNNNNTCC	2 cut(s)	2862, 2894
Alw21I	GWGCWC	1 cut(s)	503
Alw26I	GTCTC	6 cut(s)	329, 1079, 1147, 2143, 2486, 2865
AlwI	GGATC	3 cut(s)	221, 1897, 2377
AlwNI	CAGNNNCTG	2 cut(s)	673, 2780
Ama87I	CYCGRG	1 cut(s)	1995
AoxI	GGCC	6 cut(s)	12, 250, 820, 1318, 2022, 2994
ApeKI	GCWGC	6 cut(s)	920, 1038, 1111, 2681, 2854, 2857
ApoI	RAATTY	5 cut(s)	294, 966, 1013, 1618, 2493
AsiGI	ACCGGT	2 cut(s)	1697, 2252
Asp700I	GAANNNNTTC	1 cut(s)	2496
AspLEI	GCGC	1 cut(s)	610
AspS9I	GGNCC	6 cut(s)	127, 251, 786, 1308, 2623, 2995
AsuC2I	CCSGG	1 cut(s)	358
AsuHPI	GGTGA	7 cut(s)	364, 964, 1393, 1583, 1754, 2267, 2642
AsuII	TTCGAA	5 cut(s)	301, 2500, 2567, 2881, 2947
AvaI	CYCGRG	1 cut(s)	1995
AvaII	GGWCC	4 cut(s)	127, 786, 1308, 2623
BaeGI	GKGCMC	2 cut(s)	65, 2346
BalI	TGGCCA	2 cut(s)	14, 822
BanII	GRGCYC	2 cut(s)	503, 1861
Bbv12I	GWGCWC	1 cut(s)	503
BbvCI	CCTCAGC	1 cut(s)	528
BbvI	GCAGC	6 cut(s)	932, 1050, 1123, 2668, 2866, 2869
BceAI	ACGGC	3 cut(s)	5, 908, 1110
BcgI	CGANNNNNNTGC	2 cut(s)	1103, 1137
BciT130I	CCWGG	9 cut(s)	8, 261, 630, 824, 1459, 2021, 2214, 2520, 2827
BciVI	GTATCC	1 cut(s)	1623
BclI	TGATCA	1 cut(s)	960
BcnI	CCSGG	1 cut(s)	358
BcoDI	GTCTC	6 cut(s)	329, 1079, 1147, 2143, 2486, 2865
BfaI	CTAG	3 cut(s)	771, 2205, 2984
BfmI	CTRYAG	6 cut(s)	1390, 1722, 2407, 2655, 2676, 2682
BfrI	CTTAAG	1 cut(s)	2419
BfuAI	ACCTGC	2 cut(s)	994, 1319
BfuI	GTATCC	1 cut(s)	1623
BglII	AGATCT	1 cut(s)	1665
BmcAI	AGTACT	2 cut(s)	2041, 2665
Bme18I	GGWCC	4 cut(s)	127, 786, 1308, 2623
BmeT110I	CYCGRG	1 cut(s)	1995
BmgBI	CACGTC	1 cut(s)	2188
BmgT120I	GGNCC	6 cut(s)	127, 251, 786, 1308, 2623, 2995
BmiI	GGNNCC	5 cut(s)	1309, 1422, 1759, 2181, 2692
BmrI	ACTGGG	1 cut(s)	1932
BmsI	GCATC	8 cut(s)	615, 922, 950, 1627, 2327, 2505, 2710, 2800
BmuI	ACTGGG	1 cut(s)	1932
BplI	GAGNNNNNCTC	2 cut(s)	2123, 2155
BpmI	CTGGAG	4 cut(s)	53, 863, 875, 1099
Bpu10I	CCTNAGC	2 cut(s)	528, 1416
Bpu14I	TTCGAA	5 cut(s)	301, 2500, 2567, 2881, 2947
BpuEI	CTTGAG	6 cut(s)	119, 131, 632, 1426, 1487, 2848
BpuMI	CCSGG	1 cut(s)	358
BsaI	GGTCTC	1 cut(s)	1079
BsaWI	WCCGGW	4 cut(s)	349, 695, 1697, 2252
BsaXI	ACNNNNNCTCC	4 cut(s)	326, 356, 2862, 2892
Bsc4I	CCNNNNNNNGG	7 cut(s)	260, 356, 391, 646, 1107, 2219, 2935
Bse118I	RCCGGY	3 cut(s)	129, 1697, 2252
Bse1I	ACTGG	8 cut(s)	70, 623, 858, 971, 1236, 1927, 2762, 2945
Bse3DI	GCAATG	3 cut(s)	1321, 1687, 2827
BseBI	CCWGG	9 cut(s)	8, 261, 630, 824, 1459, 2021, 2214, 2520, 2827
BseLI	CCNNNNNNNGG	7 cut(s)	260, 356, 391, 646, 1107, 2219, 2935
BseMI	GCAATG	3 cut(s)	1321, 1687, 2827
BseMII	CTCAG	9 cut(s)	90, 202, 221, 519, 1430, 1797, 2057, 2485, 2497
BseNI	ACTGG	8 cut(s)	70, 623, 858, 971, 1236, 1927, 2762, 2945
BseRI	GAGGAG	3 cut(s)	525, 551, 725
BseSI	GKGCMC	2 cut(s)	65, 2346
BseXI	GCAGC	6 cut(s)	932, 1050, 1123, 2668, 2866, 2869
BsgI	GTGCAG	3 cut(s)	385, 972, 1958
Bsh1236I	CGCG	3 cut(s)	241, 708, 1790
BshFI	GGCC	6 cut(s)	14, 252, 822, 1320, 2024, 2996
BshTI	ACCGGT	2 cut(s)	1697, 2252
BsiHKAI	GWGCWC	1 cut(s)	503
BsiHKCI	CYCGRG	1 cut(s)	1995
BsiSI	CCGG	6 cut(s)	130, 350, 357, 696, 1698, 2253
BslFI	GGGAC	3 cut(s)	997, 1321, 2951
BslI	CCNNNNNNNGG	7 cut(s)	260, 356, 391, 646, 1107, 2219, 2935
BsmAI	GTCTC	6 cut(s)	329, 1079, 1147, 2143, 2486, 2865
BsmBI	CGTCTC	1 cut(s)	2486
BsmFI	GGGAC	3 cut(s)	997, 1321, 2951
BsmI	GAATGC	2 cut(s)	1417, 2481
BsnI	GGCC	6 cut(s)	14, 252, 822, 1320, 2024, 2996
Bso31I	GGTCTC	1 cut(s)	1079
BsoBI	CYCGRG	1 cut(s)	1995
Bsp119I	TTCGAA	5 cut(s)	301, 2500, 2567, 2881, 2947
Bsp1286I	GDGCHC	4 cut(s)	65, 503, 1861, 2346
Bsp19I	CCATGG	3 cut(s)	1092, 2434, 2694
BspACI	CCGC	8 cut(s)	34, 42, 87, 142, 164, 241, 401, 1597
BspANI	GGCC	6 cut(s)	14, 252, 822, 1320, 2024, 2996
BspCNI	CTCAG	9 cut(s)	89, 201, 220, 520, 1429, 1798, 2056, 2484, 2496
BspFNI	CGCG	3 cut(s)	241, 708, 1790
BspHI	TCATGA	1 cut(s)	223
BspLI	GGNNCC	5 cut(s)	1309, 1422, 1759, 2181, 2692
BspMAI	CTGCAG	3 cut(s)	1394, 1726, 2686
BspMI	ACCTGC	2 cut(s)	994, 1319
BspPI	GGATC	3 cut(s)	221, 1897, 2377
BspT104I	TTCGAA	5 cut(s)	301, 2500, 2567, 2881, 2947
BspTI	CTTAAG	1 cut(s)	2419
BspTNI	GGTCTC	1 cut(s)	1079
BsrBI	CCGCTC	1 cut(s)	403
BsrDI	GCAATG	3 cut(s)	1321, 1687, 2827
BsrFI	RCCGGY	3 cut(s)	129, 1697, 2252
BsrI	ACTGG	8 cut(s)	70, 623, 858, 971, 1236, 1927, 2762, 2945
BssAI	RCCGGY	3 cut(s)	129, 1697, 2252
BssT1I	CCWWGG	6 cut(s)	1092, 1333, 2434, 2619, 2626, 2694
Bst2UI	CCWGG	9 cut(s)	8, 261, 630, 824, 1459, 2021, 2214, 2520, 2827
Bst4CI	ACNGT	3 cut(s)	450, 2083, 2914
Bst6I	CTCTTC	4 cut(s)	575, 772, 1838, 2840
BstAFI	CTTAAG	1 cut(s)	2419
BstAPI	GCANNNNNTGC	1 cut(s)	2053
BstBI	TTCGAA	5 cut(s)	301, 2500, 2567, 2881, 2947
BstC8I	GCNNGC	3 cut(s)	599, 1792, 2785
BstDSI	CCRYGG	3 cut(s)	1092, 2434, 2694
BstEII	GGTNACC	1 cut(s)	352
BstFNI	CGCG	3 cut(s)	241, 708, 1790
BstHHI	GCGC	1 cut(s)	610
BstMAI	GTCTC	6 cut(s)	329, 1079, 1147, 2143, 2486, 2865
BstMWI	GCNNNNNNNGC	4 cut(s)	139, 175, 607, 2053
BstNI	CCWGG	9 cut(s)	8, 261, 630, 824, 1459, 2021, 2214, 2520, 2827
BstNSI	RCATGY	3 cut(s)	547, 2289, 2722
BstPI	GGTNACC	1 cut(s)	352
BstSFI	CTRYAG	6 cut(s)	1390, 1722, 2407, 2655, 2676, 2682
BstSLI	GKGCMC	2 cut(s)	65, 2346
BstUI	CGCG	3 cut(s)	241, 708, 1790
BstV1I	GCAGC	6 cut(s)	932, 1050, 1123, 2668, 2866, 2869
BstX2I	RGATCY	2 cut(s)	1665, 2369
BstXI	CCANNNNNNTGG	1 cut(s)	2633
BstYI	RGATCY	2 cut(s)	1665, 2369
BsuI	GTATCC	1 cut(s)	1623
BsuRI	GGCC	6 cut(s)	14, 252, 822, 1320, 2024, 2996
BtgI	CCRYGG	3 cut(s)	1092, 2434, 2694
BtgZI	GCGATG	1 cut(s)	2528
BtrI	CACGTC	1 cut(s)	2188
BtsI	GCAGTG	2 cut(s)	373, 1833
BtsIMutI	CAGTG	5 cut(s)	373, 446, 1229, 1599, 1833
BveI	ACCTGC	2 cut(s)	994, 1319
Cac8I	GCNNGC	3 cut(s)	599, 1792, 2785
CaiI	CAGNNNCTG	2 cut(s)	673, 2780
CciI	TCATGA	1 cut(s)	223
CfoI	GCGC	1 cut(s)	610
Cfr10I	RCCGGY	3 cut(s)	129, 1697, 2252
Cfr13I	GGNCC	6 cut(s)	127, 251, 786, 1308, 2623, 2995
CseI	GACGC	1 cut(s)	2468
Csp6I	GTAC	4 cut(s)	1970, 1992, 2040, 2664
CspAI	ACCGGT	2 cut(s)	1697, 2252
CviQI	GTAC	4 cut(s)	1970, 1992, 2040, 2664
DraI	TTTAAA	1 cut(s)	868
EaeI	YGGCCR	2 cut(s)	12, 820
Eam1104I	CTCTTC	4 cut(s)	575, 772, 1838, 2840
EarI	CTCTTC	4 cut(s)	575, 772, 1838, 2840
Ecl136II	GAGCTC	1 cut(s)	501
Eco130I	CCWWGG	6 cut(s)	1092, 1333, 2434, 2619, 2626, 2694
Eco24I	GRGCYC	2 cut(s)	503, 1861
Eco31I	GGTCTC	1 cut(s)	1079
Eco47I	GGWCC	4 cut(s)	127, 786, 1308, 2623
Eco53kI	GAGCTC	1 cut(s)	501
Eco57I	CTGAAG	3 cut(s)	599, 650, 695
Eco88I	CYCGRG	1 cut(s)	1995
Eco91I	GGTNACC	1 cut(s)	352
EcoICRI	GAGCTC	1 cut(s)	501
EcoO109I	RGGNCCY	2 cut(s)	1308, 2995
EcoO65I	GGTNACC	1 cut(s)	352
EcoRI	GAATTC	1 cut(s)	966
EcoRII	CCWGG	9 cut(s)	6, 259, 628, 822, 1457, 2019, 2212, 2518, 2825
EcoT14I	CCWWGG	6 cut(s)	1092, 1333, 2434, 2619, 2626, 2694
EcoT22I	ATGCAT	1 cut(s)	2320
EcoT38I	GRGCYC	2 cut(s)	503, 1861
ErhI	CCWWGG	6 cut(s)	1092, 1333, 2434, 2619, 2626, 2694
Esp3I	CGTCTC	1 cut(s)	2486
FalI	AAGNNNNNCTT	4 cut(s)	389, 421, 2653, 2685
FaqI	GGGAC	3 cut(s)	997, 1321, 2951
FauI	CCCGC	2 cut(s)	94, 1590
FbaI	TGATCA	1 cut(s)	960
FriOI	GRGCYC	2 cut(s)	503, 1861
FspBI	CTAG	3 cut(s)	771, 2205, 2984
GlaI	GCGC	1 cut(s)	609
GsuI	CTGGAG	4 cut(s)	53, 863, 875, 1099
HaeIII	GGCC	6 cut(s)	14, 252, 822, 1320, 2024, 2996
HapII	CCGG	6 cut(s)	130, 350, 357, 696, 1698, 2253
HgaI	GACGC	1 cut(s)	2468
HhaI	GCGC	1 cut(s)	610
Hin6I	GCGC	1 cut(s)	608
HinP1I	GCGC	1 cut(s)	608
HincII	GTYRAC	2 cut(s)	1402, 2917
HindII	GTYRAC	2 cut(s)	1402, 2917
HindIII	AAGCTT	2 cut(s)	2099, 2950
HpaII	CCGG	6 cut(s)	130, 350, 357, 696, 1698, 2253
HphI	GGTGA	7 cut(s)	364, 964, 1393, 1583, 1754, 2267, 2642
Hpy166II	GTNNAC	6 cut(s)	373, 757, 1384, 1402, 2727, 2917
Hpy8I	GTNNAC	6 cut(s)	373, 757, 1384, 1402, 2727, 2917
Hpy99I	CGWCG	4 cut(s)	26, 158, 161, 235
HpyCH4III	ACNGT	3 cut(s)	450, 2083, 2914
HpyCH4IV	ACGT	3 cut(s)	603, 2187, 2602
HpyF10VI	GCNNNNNNNGC	4 cut(s)	139, 175, 607, 2053
HpySE526I	ACGT	3 cut(s)	603, 2187, 2602
HspAI	GCGC	1 cut(s)	608
Ksp22I	TGATCA	1 cut(s)	960
LmnI	GCTCC	3 cut(s)	166, 506, 1000
Lsp1109I	GCAGC	6 cut(s)	932, 1050, 1123, 2668, 2866, 2869
LweI	GCATC	8 cut(s)	615, 922, 950, 1627, 2327, 2505, 2710, 2800
MaeI	CTAG	3 cut(s)	771, 2205, 2984
MaeII	ACGT	3 cut(s)	603, 2187, 2602
MaeIII	GTNAC	8 cut(s)	352, 444, 826, 849, 1717, 2005, 2603, 2924
MbiI	CCGCTC	1 cut(s)	403
MfeI	CAATTG	1 cut(s)	1893
MflI	RGATCY	2 cut(s)	1665, 2369
MhlI	GDGCHC	4 cut(s)	65, 503, 1861, 2346
MlsI	TGGCCA	2 cut(s)	14, 822
MluNI	TGGCCA	2 cut(s)	14, 822
MlyI	GAGTC	4 cut(s)	197, 742, 1114, 2867
MmeI	TCCRAC	1 cut(s)	2933
Mox20I	TGGCCA	2 cut(s)	14, 822
Mph1103I	ATGCAT	1 cut(s)	2320
MroXI	GAANNNNTTC	1 cut(s)	2496
MscI	TGGCCA	2 cut(s)	14, 822
MseI	TTAA	8 cut(s)	867, 1164, 1500, 1511, 2093, 2361, 2420, 2795
MslI	CAYNNNNRTG	1 cut(s)	2706
Msp20I	TGGCCA	2 cut(s)	14, 822
MspA1I	CMGCKG	2 cut(s)	36, 2681
MspCI	CTTAAG	1 cut(s)	2419
MspI	CCGG	6 cut(s)	130, 350, 357, 696, 1698, 2253
MunI	CAATTG	1 cut(s)	1893
Mva1269I	GAATGC	2 cut(s)	1417, 2481
MvaI	CCWGG	9 cut(s)	8, 261, 630, 824, 1459, 2021, 2214, 2520, 2827
MvnI	CGCG	3 cut(s)	241, 708, 1790
MwoI	GCNNNNNNNGC	4 cut(s)	139, 175, 607, 2053
NciI	CCSGG	1 cut(s)	358
NcoI	CCATGG	3 cut(s)	1092, 2434, 2694
NlaIV	GGNNCC	5 cut(s)	1309, 1422, 1759, 2181, 2692
NmuCI	GTSAC	5 cut(s)	352, 444, 2005, 2603, 2924
NsiI	ATGCAT	1 cut(s)	2320
NspI	RCATGY	3 cut(s)	547, 2289, 2722
NspV	TTCGAA	5 cut(s)	301, 2500, 2567, 2881, 2947
PagI	TCATGA	1 cut(s)	223
PctI	GAATGC	2 cut(s)	1417, 2481
PdmI	GAANNNNTTC	1 cut(s)	2496
PflMI	CCANNNNNTGG	2 cut(s)	646, 2219
PinAI	ACCGGT	2 cut(s)	1697, 2252
PleI	GAGTC	4 cut(s)	197, 742, 1114, 2867
PpsI	GAGTC	4 cut(s)	197, 742, 1114, 2867
PpuMI	RGGWCCY	1 cut(s)	1308
PsiI	TTATAA	1 cut(s)	2615
Psp124BI	GAGCTC	1 cut(s)	503
Psp5II	RGGWCCY	1 cut(s)	1308
Psp6I	CCWGG	9 cut(s)	6, 259, 628, 822, 1457, 2019, 2212, 2518, 2825
PspEI	GGTNACC	1 cut(s)	352
PspGI	CCWGG	9 cut(s)	6, 259, 628, 822, 1457, 2019, 2212, 2518, 2825
PspN4I	GGNNCC	5 cut(s)	1309, 1422, 1759, 2181, 2692
PspPI	GGNCC	6 cut(s)	127, 251, 786, 1308, 2623, 2995
PspPPI	RGGWCCY	1 cut(s)	1308
PstI	CTGCAG	3 cut(s)	1394, 1726, 2686
PstNI	CAGNNNCTG	2 cut(s)	673, 2780
PsuI	RGATCY	2 cut(s)	1665, 2369
PvuII	CAGCTG	1 cut(s)	2681
RsaI	GTAC	4 cut(s)	1971, 1993, 2041, 2665
RsaNI	GTAC	4 cut(s)	1970, 1992, 2040, 2664
RseI	CAYNNNNRTG	1 cut(s)	2706
SacI	GAGCTC	1 cut(s)	503
SaqAI	TTAA	8 cut(s)	867, 1164, 1500, 1511, 2093, 2361, 2420, 2795
Sau96I	GGNCC	6 cut(s)	127, 251, 786, 1308, 2623, 2995
ScaI	AGTACT	2 cut(s)	2041, 2665
SchI	GAGTC	4 cut(s)	197, 742, 1114, 2867
SduI	GDGCHC	4 cut(s)	65, 503, 1861, 2346
SfaNI	GCATC	8 cut(s)	615, 922, 950, 1627, 2327, 2505, 2710, 2800
SfcI	CTRYAG	6 cut(s)	1390, 1722, 2407, 2655, 2676, 2682
SfuI	TTCGAA	5 cut(s)	301, 2500, 2567, 2881, 2947
SinI	GGWCC	4 cut(s)	127, 786, 1308, 2623
SmiMI	CAYNNNNRTG	1 cut(s)	2706
SmlI	CTYRAG	7 cut(s)	134, 146, 611, 1441, 1466, 2419, 2863
SmoI	CTYRAG	7 cut(s)	134, 146, 611, 1441, 1466, 2419, 2863
SsiI	CCGC	8 cut(s)	34, 42, 87, 142, 164, 241, 401, 1597
SspI	AATATT	3 cut(s)	910, 1435, 1480
SspMI	CTAG	3 cut(s)	771, 2205, 2984
SstI	GAGCTC	1 cut(s)	503
StyI	CCWWGG	6 cut(s)	1092, 1333, 2434, 2619, 2626, 2694
TaaI	ACNGT	3 cut(s)	450, 2083, 2914
TaiI	ACGT	3 cut(s)	606, 2190, 2605
TatI	WGTACW	2 cut(s)	2039, 2663
TauI	GCSGC	4 cut(s)	36, 44, 145, 403
Tru1I	TTAA	8 cut(s)	867, 1164, 1500, 1511, 2093, 2361, 2420, 2795
Tru9I	TTAA	8 cut(s)	867, 1164, 1500, 1511, 2093, 2361, 2420, 2795
TscAI	CASTG	5 cut(s)	373, 453, 1236, 1599, 1833
TseFI	GTSAC	5 cut(s)	352, 444, 2005, 2603, 2924
TseI	GCWGC	6 cut(s)	920, 1038, 1111, 2681, 2854, 2857
Tsp45I	GTSAC	5 cut(s)	352, 444, 2005, 2603, 2924
TspGWI	ACGGA	2 cut(s)	219, 711
TspRI	CASTG	5 cut(s)	373, 453, 1236, 1599, 1833
Van91I	CCANNNNNTGG	2 cut(s)	646, 2219
Vha464I	CTTAAG	1 cut(s)	2419
VpaK11BI	GGWCC	4 cut(s)	127, 786, 1308, 2623
XapI	RAATTY	5 cut(s)	294, 966, 1013, 1618, 2493
XbaI	TCTAGA	1 cut(s)	770
XceI	RCATGY	3 cut(s)	547, 2289, 2722
XmnI	GAANNNNTTC	1 cut(s)	2496
XspI	CTAG	3 cut(s)	771, 2205, 2984
ZrmI	AGTACT	2 cut(s)	2041, 2665
Zsp2I	ATGCAT	1 cut(s)	2320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.