Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0010084

Physical Location & Seq

Genomic Coordinates Forward (+)

11588778 .. 11593500

Gene Structure 4723 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00171270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGTGCCAGGTGGCCATCGCCGTCGATATGAGCCGCTGTGCCGCTTCACCTCCCAATCTGTGCCCCCTCCAGTTCTCAGGTAGCCCCGCCAAGCTATTCGGATTCGGGTTCGACATTCAGAAGAAGGACCGGCTCAAGAGGCGGCTCAAGTTCGTCGTCAGTGCGGAGCTGTCCAAGCCATTCTCTCTCAGCTTCGGCTTGGACTCTCAGGGCTATCAGCTTCATGATCCGTCGCAGTCGCGGAGGATTGGCCCTGTTCCTGGGGATATTGCTGAAATTGAAGCCTACTGTAGAATTTTTCGAAGTGCTGAACGACTACATACTGCATTGATGGAGACATTGTGCAATCCGGTGACCGGGGTGTGCAGTGTTTATTATGACTTCCCATCGGAGGAAAAGCCGCTCTTGGAGGATAAGATTGTGTCTGTGATTGGTTGCATGATGTCACTGTTGAACAAAGCAAGGGAGGATGTGCTTTCGGGAAGATCAGCCATTATGAGCTCCTTTCGAGGAGTTGTGGATGTCGGTGAGGTGGGGGACGTGCTTCCTCCCCTTGCTGTTTTCAGGAGTGAGCTGAAGAGGTGTTGCGAGAGCTTGCACGTTGCGCTTGAGGACTGGTTGTTGATGCCTGGGGATGAGCAGAGCTTGGATGTGTGGAGGAAACTTCAGAGGCTGAAGAATGTGTGTTATGATTCCGGTTTTCCACGCGAGGAGGATTATCCGTGCAATACGCTTTTTGCTAATTGGACTCCTGTTTACTTATCCTCTTCTAAGGAGGATGCTAGGTCCGAAGATTCAGAGGTAGCGTTTTGGAGGGGTGGCCAGGTAACAGAAGAAGGTCTGGAGTGGTTACTGGAGAGAGGATTTAAAACTATTGTTGATCTTAGGGCAGAGATTGTAAAAGACAATATTTATCAGGCAGCCGTAGATGATGCTATTGCATCAGGGAAGGTCGAATTGATCAGAATTCCAGTTGAAGTTGGGACTGCACCTTCAATGGAGCAGGTTGAGAAATTCGCAAGTTTGGTTTCAGATTGCAGCAAAAACCCAATCTATCTTCATAGCAAGGAAGGTCTCTGGAGAACATCTGCCATGGTTTCCAGATGGAGGCAGCACTTGACTCGCCGTGCTGTTCAGTTTGTCTCCAAGCAGTCGGTTTCTCTTAATGGAGAAGTTGAAACTATGCACAAAAGTTCCCTCCTTGAAAAGAAGAATGAGTCACTGGACTCAATTCATGGTTCAAATGGGGTGCTACAAAAAAATGATTCTGTAGACAGGGATGAAGCAAATCTAAATGGGACCTGGAATGGCCTTATATCTATCCAAGGTTTGACATCAGTTGAATCAGATGAAAGTGGGGAAAAACCTTTGGTGAACTTCTGCAGGGAAGTTGACCCCCTGAATGCTCAGGTTCCTCCTTGCAATATTTTCTCAAGAAAAGAAATGTCCAGGTTTCTTGAGAGAAAAAATATTGCACCACTCACTTATTTTAATTATCAGTTAAATAGGTTGAAGGTATTACCAATTTCCAGATATATGAATACTAAGATAATGTGGAGAGGTGAGATTGTTGATACTGATTCAGTGCGGGAGGTTGTGGAGGCAGAAAATTCCAATGGGATACCTGATGCAGAACATCTGCTTCCAGATTTCCAGATCTCTGCTTCTGGCAATGGGAAGTATTTGACCGGTGTTGGTAATGGTTCTGTAACTGCAGTCGTAAATGGATTTGGTGAAGGGGAGAAAGGTTCCTTGTTAGCCACTAATTTATCTACTAACGCGAGCAACAATCATTCTGAGAGTGTCTTATCTAAAGCAGTGAAGGAGGAAAGGAAGAGTAATGGTAGAGCCCCTTTAGTTATAAGTGATGATGAATTGGGATCAATTGAAGGAGATATGTGTGCTTCTGCAACTGGGGTTGTAAGGGTGCAGTCAAGAAAGAAAGCAGAGATGTTTTTAGTTCGAACAGATGGATTCTCTTGTACCCGAGAAAAAGTGACAGAATCCTCCCTGGCCTTCACTCATCCAAGTACTCAGCAACAAATGCTTATGTGGAAATCTACACCAAAGACAGTATTAGTGTTAAAGAAGCTTGGGCATGAGCTTATGGAACAAGCTAAAGAGGTTGTCTCCTTCTTGTATTACCAAGAGAAAATGAATGTTCTGGTGGAACCTGACGTGCATGATGTATTTGCTAGAATCCCAGGTTTTGGATTTGTTCAGACCTTCTACACCCAAGATACCGGTGATCTGCATGAGAGGGTTGATTTTGTGGCATGTCTGGGAGGGGATGGGGTAATACTCCATGCTTCAAATCTATTCAAAGGTGCTGTTCCCCCATCGTATCATTTAATCTTGGATCCCTTGGATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NAD_kinase

Protein Analysis

791

Amino Acids

87.97

Weight (kDa)

5.49

Isoelectric Point (pI)

40.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTP-NADK	PF22741	241 - 388	7e-65	DSP-PTPase phosphatase fused to NAD+ Kinase
Tc-R-P	PF22785	275 - 369	1.1e-10	Polymorphic toxin system, DSP-PTPase phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21640 AT1G21640
fragaria_vesca	FvH4_2g27820 FvH4_2g27820
malus_domestica	MD08G1160800.v1.1
prunus_persica	Prupe.1G489900_v2.0.a1 Prupe.1G489900_v2.0.a1 Prupe.1G489900_v2.0.a1
pyrus_communis	pycom348g00070
rosa_chinensis	RchiOBHm_Chr6g0296671
rosa_laevigata	RLG00000011671
rosa_multiflora	Rmu_sc0001741.1_g000009
rosa_roxburghii	Rroxscaffold_7G00171270
rosa_rugosa	Rorug06G0264100 Rorug06G0264100
rosa_samantha	Rh6AG375900 Rh6BG384200 Rh6CG389300 Rh6DG376700
rosa_wichuraiana	Rw6G032770 Rw6G032860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1862
Acc36I	ACCTGC	1 cut(s)	994
AccB7I	CCANNNNNTGG	1 cut(s)	2210
AccBSI	CCGCTC	1 cut(s)	403
AccI	GTMKAC	1 cut(s)	1272
AccII	CGCG	3 cut(s)	241, 708, 1781
AciI	CCGC	8 cut(s)	34, 42, 87, 142, 164, 241, 401, 1588
AclWI	GGATC	4 cut(s)	221, 1888, 2354, 2367
AcoI	YGGCCR	2 cut(s)	12, 820
AcsI	RAATTY	4 cut(s)	294, 966, 1013, 1609
AcuI	CTGAAG	3 cut(s)	596, 650, 695
AfaI	GTAC	2 cut(s)	1984, 2032
AfiI	CCNNNNNNNGG	5 cut(s)	260, 356, 391, 1107, 2210
AgeI	ACCGGT	2 cut(s)	1688, 2243
AjiI	CACGTC	2 cut(s)	541, 2179
AjnI	CCWGG	8 cut(s)	6, 259, 628, 822, 1301, 1448, 2010, 2203
Alw21I	GWGCWC	1 cut(s)	503
Alw26I	GTCTC	4 cut(s)	329, 1079, 1147, 2134
AlwI	GGATC	4 cut(s)	221, 1888, 2354, 2367
AlwNI	CAGNNNCTG	1 cut(s)	673
Ama87I	CYCGRG	1 cut(s)	1986
AoxI	GGCC	5 cut(s)	12, 250, 820, 1309, 2013
ApeKI	GCWGC	3 cut(s)	920, 1038, 1111
ApoI	RAATTY	4 cut(s)	294, 966, 1013, 1609
AsiGI	ACCGGT	2 cut(s)	1688, 2243
AspLEI	GCGC	1 cut(s)	607
AspS9I	GGNCC	4 cut(s)	127, 251, 786, 1299
AsuC2I	CCSGG	1 cut(s)	358
AsuHPI	GGTGA	7 cut(s)	39, 364, 539, 1384, 1574, 1745, 2258
AsuII	TTCGAA	2 cut(s)	301, 1963
AvaI	CYCGRG	1 cut(s)	1986
AvaII	GGWCC	3 cut(s)	127, 786, 1299
BaeGI	GKGCMC	1 cut(s)	65
BalI	TGGCCA	2 cut(s)	14, 822
BamHI	GGATCC	1 cut(s)	2359
BanII	GRGCYC	2 cut(s)	503, 1852
Bbv12I	GWGCWC	1 cut(s)	503
BbvI	GCAGC	3 cut(s)	932, 1050, 1123
BccI	CCATC	7 cut(s)	23, 325, 394, 1098, 1964, 2285, 2347
BceAI	ACGGC	3 cut(s)	5, 908, 1110
BcgI	CGANNNNNNTGC	2 cut(s)	1103, 1137
BciT130I	CCWGG	8 cut(s)	8, 261, 630, 824, 1303, 1450, 2012, 2205
BciVI	GTATCC	1 cut(s)	1614
BclI	TGATCA	1 cut(s)	960
BcnI	CCSGG	1 cut(s)	358
BcoDI	GTCTC	4 cut(s)	329, 1079, 1147, 2134
BfaI	CTAG	2 cut(s)	783, 2196
BfmI	CTRYAG	4 cut(s)	289, 1269, 1381, 1713
BfuAI	ACCTGC	1 cut(s)	994
BfuI	GTATCC	1 cut(s)	1614
BglII	AGATCT	1 cut(s)	1656
BisI	GCNGC	7 cut(s)	34, 42, 143, 401, 921, 1039, 1112
BlsI	GCNGC	7 cut(s)	35, 43, 144, 402, 922, 1040, 1113
BmcAI	AGTACT	1 cut(s)	2032
Bme1390I	CCNGG	9 cut(s)	8, 261, 358, 630, 824, 1303, 1450, 2012, 2205
Bme18I	GGWCC	3 cut(s)	127, 786, 1299
BmeT110I	CYCGRG	1 cut(s)	1986
BmgBI	CACGTC	2 cut(s)	541, 2179
BmgT120I	GGNCC	4 cut(s)	127, 251, 786, 1299
BmiI	GGNNCC	5 cut(s)	1300, 1413, 1750, 2172, 2361
BmrFI	CCNGG	9 cut(s)	8, 261, 358, 630, 824, 1303, 1450, 2012, 2205
BmrI	ACTGGG	1 cut(s)	1923
BmsI	GCATC	5 cut(s)	615, 769, 922, 950, 1618
BmuI	ACTGGG	1 cut(s)	1923
BplI	GAGNNNNNCTC	2 cut(s)	2114, 2146
BpmI	CTGGAG	4 cut(s)	53, 863, 875, 1099
Bpu10I	CCTNAGC	1 cut(s)	1407
Bpu14I	TTCGAA	2 cut(s)	301, 1963
BpuEI	CTTGAG	5 cut(s)	119, 131, 629, 1417, 1478
BpuMI	CCSGG	1 cut(s)	358
BsaI	GGTCTC	1 cut(s)	1079
BsaJI	CCNNGG	8 cut(s)	260, 357, 629, 1092, 1324, 2010, 2203, 2364
BsaWI	WCCGGW	4 cut(s)	349, 695, 1688, 2243
BsaXI	ACNNNNNCTCC	2 cut(s)	326, 356
Bsc4I	CCNNNNNNNGG	5 cut(s)	260, 356, 391, 1107, 2210
Bse118I	RCCGGY	3 cut(s)	129, 1688, 2243
Bse1I	ACTGG	6 cut(s)	70, 620, 858, 971, 1227, 1918
Bse3DI	GCAATG	1 cut(s)	1678
BseBI	CCWGG	8 cut(s)	8, 261, 630, 824, 1303, 1450, 2012, 2205
BseDI	CCNNGG	8 cut(s)	260, 357, 629, 1092, 1324, 2010, 2203, 2364
BseGI	GGATG	8 cut(s)	475, 526, 640, 655, 784, 1285, 2023, 2296
BseLI	CCNNNNNNNGG	5 cut(s)	260, 356, 391, 1107, 2210
BseMI	GCAATG	1 cut(s)	1678
BseMII	CTCAG	6 cut(s)	90, 202, 221, 1421, 1788, 2048
BseNI	ACTGG	6 cut(s)	70, 620, 858, 971, 1227, 1918
BseRI	GAGGAG	2 cut(s)	525, 725
BseSI	GKGCMC	1 cut(s)	65
BseXI	GCAGC	3 cut(s)	932, 1050, 1123
BsgI	GTGCAG	3 cut(s)	385, 972, 1949
Bsh1236I	CGCG	3 cut(s)	241, 708, 1781
BshFI	GGCC	5 cut(s)	14, 252, 822, 1311, 2015
BshTI	ACCGGT	2 cut(s)	1688, 2243
BsiHKAI	GWGCWC	1 cut(s)	503
BsiHKCI	CYCGRG	1 cut(s)	1986
BsiSI	CCGG	6 cut(s)	130, 350, 357, 696, 1689, 2244
BslFI	GGGAC	3 cut(s)	551, 997, 1312
BslI	CCNNNNNNNGG	5 cut(s)	260, 356, 391, 1107, 2210
BsmAI	GTCTC	4 cut(s)	329, 1079, 1147, 2134
BsmFI	GGGAC	3 cut(s)	551, 997, 1312
BsmI	GAATGC	1 cut(s)	1408
BsnI	GGCC	5 cut(s)	14, 252, 822, 1311, 2015
Bso31I	GGTCTC	1 cut(s)	1079
BsoBI	CYCGRG	1 cut(s)	1986
Bsp119I	TTCGAA	2 cut(s)	301, 1963
Bsp1286I	GDGCHC	3 cut(s)	65, 503, 1852
Bsp143I	GATC	8 cut(s)	226, 485, 880, 960, 1656, 1880, 2248, 2359
Bsp19I	CCATGG	1 cut(s)	1092
BspACI	CCGC	8 cut(s)	34, 42, 87, 142, 164, 241, 401, 1588
BspANI	GGCC	5 cut(s)	14, 252, 822, 1311, 2015
BspCNI	CTCAG	6 cut(s)	89, 201, 220, 1420, 1789, 2047
BspFNI	CGCG	3 cut(s)	241, 708, 1781
BspHI	TCATGA	1 cut(s)	223
BspLI	GGNNCC	5 cut(s)	1300, 1413, 1750, 2172, 2361
BspMAI	CTGCAG	2 cut(s)	1385, 1717
BspMI	ACCTGC	1 cut(s)	994
BspPI	GGATC	4 cut(s)	221, 1888, 2354, 2367
BspT104I	TTCGAA	2 cut(s)	301, 1963
BspTNI	GGTCTC	1 cut(s)	1079
BsrBI	CCGCTC	1 cut(s)	403
BsrDI	GCAATG	1 cut(s)	1678
BsrFI	RCCGGY	3 cut(s)	129, 1688, 2243
BsrI	ACTGG	6 cut(s)	70, 620, 858, 971, 1227, 1918
BssAI	RCCGGY	3 cut(s)	129, 1688, 2243
BssECI	CCNNGG	8 cut(s)	260, 357, 629, 1092, 1324, 2010, 2203, 2364
BssMI	GATC	8 cut(s)	226, 485, 880, 960, 1656, 1880, 2248, 2359
BssT1I	CCWWGG	3 cut(s)	1092, 1324, 2364
Bst2UI	CCWGG	8 cut(s)	8, 261, 630, 824, 1303, 1450, 2012, 2205
Bst4CI	ACNGT	3 cut(s)	290, 450, 2074
Bst6I	CTCTTC	3 cut(s)	572, 772, 1829
BstAPI	GCANNNNNTGC	1 cut(s)	2044
BstBI	TTCGAA	2 cut(s)	301, 1963
BstC8I	GCNNGC	2 cut(s)	596, 1783
BstDEI	CTNAG	9 cut(s)	76, 188, 207, 771, 884, 1407, 1545, 1797, 2034
BstDSI	CCRYGG	1 cut(s)	1092
BstEII	GGTNACC	1 cut(s)	352
BstF5I	GGATG	8 cut(s)	475, 526, 640, 655, 784, 1285, 2023, 2296
BstFNI	CGCG	3 cut(s)	241, 708, 1781
BstHHI	GCGC	1 cut(s)	607
BstKTI	GATC	8 cut(s)	229, 488, 883, 963, 1659, 1883, 2251, 2362
BstMAI	GTCTC	4 cut(s)	329, 1079, 1147, 2134
BstMBI	GATC	8 cut(s)	226, 485, 880, 960, 1656, 1880, 2248, 2359
BstMWI	GCNNNNNNNGC	4 cut(s)	139, 175, 604, 2044
BstNI	CCWGG	8 cut(s)	8, 261, 630, 824, 1303, 1450, 2012, 2205
BstNSI	RCATGY	1 cut(s)	2280
BstPI	GGTNACC	1 cut(s)	352
BstSCI	CCNGG	9 cut(s)	6, 259, 356, 628, 822, 1301, 1448, 2010, 2203
BstSFI	CTRYAG	4 cut(s)	289, 1269, 1381, 1713
BstSLI	GKGCMC	1 cut(s)	65
BstUI	CGCG	3 cut(s)	241, 708, 1781
BstV1I	GCAGC	3 cut(s)	932, 1050, 1123
BstX2I	RGATCY	2 cut(s)	1656, 2359
BstYI	RGATCY	2 cut(s)	1656, 2359
BsuI	GTATCC	1 cut(s)	1614
BsuRI	GGCC	5 cut(s)	14, 252, 822, 1311, 2015
BtgI	CCRYGG	1 cut(s)	1092
BtrI	CACGTC	2 cut(s)	541, 2179
BtsCI	GGATG	8 cut(s)	475, 526, 640, 655, 784, 1285, 2023, 2296
BtsI	GCAGTG	2 cut(s)	373, 1824
BtsIMutI	CAGTG	6 cut(s)	166, 373, 446, 1220, 1590, 1824
BveI	ACCTGC	1 cut(s)	994
Cac8I	GCNNGC	2 cut(s)	596, 1783
CaiI	CAGNNNCTG	1 cut(s)	673
CciI	TCATGA	1 cut(s)	223
CfoI	GCGC	1 cut(s)	607
Cfr10I	RCCGGY	3 cut(s)	129, 1688, 2243
Cfr13I	GGNCC	4 cut(s)	127, 251, 786, 1299
Csp6I	GTAC	2 cut(s)	1983, 2031
CspAI	ACCGGT	2 cut(s)	1688, 2243
CviAII	CATG	9 cut(s)	224, 439, 1093, 1235, 2099, 2183, 2255, 2277, 2306
CviQI	GTAC	2 cut(s)	1983, 2031
DdeI	CTNAG	9 cut(s)	76, 188, 207, 771, 884, 1407, 1545, 1797, 2034
DpnI	GATC	8 cut(s)	228, 487, 882, 962, 1658, 1882, 2250, 2361
DpnII	GATC	8 cut(s)	226, 485, 880, 960, 1656, 1880, 2248, 2359
DraI	TTTAAA	1 cut(s)	868
EaeI	YGGCCR	2 cut(s)	12, 820
Eam1104I	CTCTTC	3 cut(s)	572, 772, 1829
EarI	CTCTTC	3 cut(s)	572, 772, 1829
Ecl136II	GAGCTC	1 cut(s)	501
Eco130I	CCWWGG	3 cut(s)	1092, 1324, 2364
Eco24I	GRGCYC	2 cut(s)	503, 1852
Eco31I	GGTCTC	1 cut(s)	1079
Eco47I	GGWCC	3 cut(s)	127, 786, 1299
Eco53kI	GAGCTC	1 cut(s)	501
Eco57I	CTGAAG	3 cut(s)	596, 650, 695
Eco88I	CYCGRG	1 cut(s)	1986
Eco91I	GGTNACC	1 cut(s)	352
EcoICRI	GAGCTC	1 cut(s)	501
EcoO109I	RGGNCCY	1 cut(s)	1299
EcoO65I	GGTNACC	1 cut(s)	352
EcoRI	GAATTC	1 cut(s)	966
EcoRII	CCWGG	8 cut(s)	6, 259, 628, 822, 1301, 1448, 2010, 2203
EcoT14I	CCWWGG	3 cut(s)	1092, 1324, 2364
EcoT38I	GRGCYC	2 cut(s)	503, 1852
ErhI	CCWWGG	3 cut(s)	1092, 1324, 2364
FaeI	CATG	9 cut(s)	227, 442, 1096, 1238, 2102, 2186, 2258, 2280, 2309
FalI	AAGNNNNNCTT	2 cut(s)	389, 421
FaqI	GGGAC	3 cut(s)	551, 997, 1312
FatI	CATG	9 cut(s)	223, 438, 1092, 1234, 2098, 2182, 2254, 2276, 2305
FauI	CCCGC	2 cut(s)	94, 1581
FbaI	TGATCA	1 cut(s)	960
FblI	GTMKAC	1 cut(s)	1272
Fnu4HI	GCNGC	7 cut(s)	34, 42, 143, 401, 921, 1039, 1112
FokI	GGATG	8 cut(s)	482, 533, 647, 662, 791, 1292, 2010, 2303
FriOI	GRGCYC	2 cut(s)	503, 1852
Fsp4HI	GCNGC	7 cut(s)	34, 42, 143, 401, 921, 1039, 1112
FspBI	CTAG	2 cut(s)	783, 2196
GlaI	GCGC	1 cut(s)	606
GluI	GCNGC	7 cut(s)	34, 42, 143, 401, 921, 1039, 1112
GsuI	CTGGAG	4 cut(s)	53, 863, 875, 1099
HaeIII	GGCC	5 cut(s)	14, 252, 822, 1311, 2015
HapII	CCGG	6 cut(s)	130, 350, 357, 696, 1689, 2244
HhaI	GCGC	1 cut(s)	607
Hin1II	CATG	9 cut(s)	227, 442, 1096, 1238, 2102, 2186, 2258, 2280, 2309
Hin6I	GCGC	1 cut(s)	605
HinP1I	GCGC	1 cut(s)	605
HincII	GTYRAC	1 cut(s)	1393
HindII	GTYRAC	1 cut(s)	1393
HindIII	AAGCTT	1 cut(s)	2090
HpaII	CCGG	6 cut(s)	130, 350, 357, 696, 1689, 2244
HphI	GGTGA	7 cut(s)	39, 364, 539, 1384, 1574, 1745, 2258
Hpy166II	GTNNAC	4 cut(s)	757, 1273, 1375, 1393
Hpy8I	GTNNAC	4 cut(s)	757, 1273, 1375, 1393
Hpy99I	CGWCG	3 cut(s)	26, 158, 235
HpyCH4III	ACNGT	3 cut(s)	290, 450, 2074
HpyCH4IV	ACGT	3 cut(s)	540, 600, 2178
HpyF10VI	GCNNNNNNNGC	4 cut(s)	139, 175, 604, 2044
HpyF3I	CTNAG	9 cut(s)	76, 188, 207, 771, 884, 1407, 1545, 1797, 2034
HpySE526I	ACGT	3 cut(s)	540, 600, 2178
Hsp92II	CATG	9 cut(s)	227, 442, 1096, 1238, 2102, 2186, 2258, 2280, 2309
HspAI	GCGC	1 cut(s)	605
Ksp22I	TGATCA	1 cut(s)	960
Kzo9I	GATC	8 cut(s)	226, 485, 880, 960, 1656, 1880, 2248, 2359
LmnI	GCTCC	3 cut(s)	166, 506, 1000
Lsp1109I	GCAGC	3 cut(s)	932, 1050, 1123
LweI	GCATC	5 cut(s)	615, 769, 922, 950, 1618
MaeI	CTAG	2 cut(s)	783, 2196
MaeII	ACGT	3 cut(s)	540, 600, 2178
MaeIII	GTNAC	7 cut(s)	352, 444, 826, 849, 1218, 1708, 1996
MalI	GATC	8 cut(s)	228, 487, 882, 962, 1658, 1882, 2250, 2361
MbiI	CCGCTC	1 cut(s)	403
MboI	GATC	8 cut(s)	226, 485, 880, 960, 1656, 1880, 2248, 2359
MfeI	CAATTG	1 cut(s)	1884
MflI	RGATCY	2 cut(s)	1656, 2359
MhlI	GDGCHC	3 cut(s)	65, 503, 1852
MlsI	TGGCCA	2 cut(s)	14, 822
MluNI	TGGCCA	2 cut(s)	14, 822
MlyI	GAGTC	5 cut(s)	197, 742, 1114, 1220, 1226
Mox20I	TGGCCA	2 cut(s)	14, 822
MscI	TGGCCA	2 cut(s)	14, 822
MseI	TTAA	6 cut(s)	867, 1164, 1491, 1502, 2084, 2351
Msp20I	TGGCCA	2 cut(s)	14, 822
MspA1I	CMGCKG	1 cut(s)	36
MspI	CCGG	6 cut(s)	130, 350, 357, 696, 1689, 2244
MspR9I	CCNGG	9 cut(s)	8, 261, 358, 630, 824, 1303, 1450, 2012, 2205
MunI	CAATTG	1 cut(s)	1884
Mva1269I	GAATGC	1 cut(s)	1408
MvaI	CCWGG	8 cut(s)	8, 261, 630, 824, 1303, 1450, 2012, 2205
MvnI	CGCG	3 cut(s)	241, 708, 1781
MwoI	GCNNNNNNNGC	4 cut(s)	139, 175, 604, 2044
NciI	CCSGG	1 cut(s)	358
NcoI	CCATGG	1 cut(s)	1092
NdeII	GATC	8 cut(s)	226, 485, 880, 960, 1656, 1880, 2248, 2359
NlaIII	CATG	9 cut(s)	227, 442, 1096, 1238, 2102, 2186, 2258, 2280, 2309
NlaIV	GGNNCC	5 cut(s)	1300, 1413, 1750, 2172, 2361
NmuCI	GTSAC	4 cut(s)	352, 444, 1218, 1996
NspI	RCATGY	1 cut(s)	2280
NspV	TTCGAA	2 cut(s)	301, 1963
PagI	TCATGA	1 cut(s)	223
PctI	GAATGC	1 cut(s)	1408
PfeI	GAWTC	9 cut(s)	102, 692, 794, 1265, 1343, 1580, 1974, 2003, 2199
PflMI	CCANNNNNTGG	1 cut(s)	2210
PinAI	ACCGGT	2 cut(s)	1688, 2243
PkrI	GCNGC	7 cut(s)	35, 43, 144, 402, 922, 1040, 1113
PleI	GAGTC	5 cut(s)	197, 742, 1114, 1220, 1225
PpsI	GAGTC	5 cut(s)	197, 742, 1114, 1220, 1225
PpuMI	RGGWCCY	1 cut(s)	1299
PsiI	TTATAA	1 cut(s)	1862
Psp124BI	GAGCTC	1 cut(s)	503
Psp5II	RGGWCCY	1 cut(s)	1299
Psp6I	CCWGG	8 cut(s)	6, 259, 628, 822, 1301, 1448, 2010, 2203
PspEI	GGTNACC	1 cut(s)	352
PspGI	CCWGG	8 cut(s)	6, 259, 628, 822, 1301, 1448, 2010, 2203
PspN4I	GGNNCC	5 cut(s)	1300, 1413, 1750, 2172, 2361
PspPI	GGNCC	4 cut(s)	127, 251, 786, 1299
PspPPI	RGGWCCY	1 cut(s)	1299
PstI	CTGCAG	2 cut(s)	1385, 1717
PstNI	CAGNNNCTG	1 cut(s)	673
PsuI	RGATCY	2 cut(s)	1656, 2359
RsaI	GTAC	2 cut(s)	1984, 2032
RsaNI	GTAC	2 cut(s)	1983, 2031
SacI	GAGCTC	1 cut(s)	503
SaqAI	TTAA	6 cut(s)	867, 1164, 1491, 1502, 2084, 2351
SatI	GCNGC	7 cut(s)	34, 42, 143, 401, 921, 1039, 1112
Sau3AI	GATC	8 cut(s)	226, 485, 880, 960, 1656, 1880, 2248, 2359
Sau96I	GGNCC	4 cut(s)	127, 251, 786, 1299
ScaI	AGTACT	1 cut(s)	2032
SchI	GAGTC	5 cut(s)	197, 742, 1114, 1220, 1226
ScrFI	CCNGG	9 cut(s)	8, 261, 358, 630, 824, 1303, 1450, 2012, 2205
SduI	GDGCHC	3 cut(s)	65, 503, 1852
SfaNI	GCATC	5 cut(s)	615, 769, 922, 950, 1618
SfcI	CTRYAG	4 cut(s)	289, 1269, 1381, 1713
SfuI	TTCGAA	2 cut(s)	301, 1963
SinI	GGWCC	3 cut(s)	127, 786, 1299
SmlI	CTYRAG	5 cut(s)	134, 146, 608, 1432, 1457
SmoI	CTYRAG	5 cut(s)	134, 146, 608, 1432, 1457
SsiI	CCGC	8 cut(s)	34, 42, 87, 142, 164, 241, 401, 1588
SspI	AATATT	3 cut(s)	910, 1426, 1471
SspMI	CTAG	2 cut(s)	783, 2196
SstI	GAGCTC	1 cut(s)	503
StyD4I	CCNGG	9 cut(s)	6, 259, 356, 628, 822, 1301, 1448, 2010, 2203
StyI	CCWWGG	3 cut(s)	1092, 1324, 2364
TaaI	ACNGT	3 cut(s)	290, 450, 2074
TaiI	ACGT	3 cut(s)	543, 603, 2181
TaqI	TCGA	6 cut(s)	24, 111, 301, 508, 954, 1963
TatI	WGTACW	1 cut(s)	2030
TauI	GCSGC	4 cut(s)	36, 44, 145, 403
TfiI	GAWTC	9 cut(s)	102, 692, 794, 1265, 1343, 1580, 1974, 2003, 2199
Tru1I	TTAA	6 cut(s)	867, 1164, 1491, 1502, 2084, 2351
Tru9I	TTAA	6 cut(s)	867, 1164, 1491, 1502, 2084, 2351
TscAI	CASTG	6 cut(s)	166, 373, 453, 1227, 1590, 1824
TseFI	GTSAC	4 cut(s)	352, 444, 1218, 1996
TseI	GCWGC	3 cut(s)	920, 1038, 1111
Tsp45I	GTSAC	4 cut(s)	352, 444, 1218, 1996
TspDTI	ATGAA	8 cut(s)	212, 1049, 1223, 1296, 1365, 1553, 1887, 2171
TspGWI	ACGGA	2 cut(s)	219, 711
TspRI	CASTG	6 cut(s)	166, 373, 453, 1227, 1590, 1824
Van91I	CCANNNNNTGG	1 cut(s)	2210
VpaK11BI	GGWCC	3 cut(s)	127, 786, 1299
XapI	RAATTY	4 cut(s)	294, 966, 1013, 1609
XceI	RCATGY	1 cut(s)	2280
XmiI	GTMKAC	1 cut(s)	1272
XspI	CTAG	2 cut(s)	783, 2196
ZrmI	AGTACT	1 cut(s)	2032

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.