Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0010084

Physical Location & Seq

Genomic Coordinates Reverse (-)

57476549 .. 57481502

Gene Structure 4954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG375900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGGTGGCATGTTGCCTCATGTGCCAGGTGGCCATCGCCGTCGATATGAGCCGCTGTGCCGCTTCACCTCCCAATCTGTGCCCCCTCCAGTTCTCAGGTAGCCCCGCCAAGCTATTCGGATTCGGGTTCGACATTCAGAAGAAGGACCGGCTCAAGAGGCGGCTCAAGTTGGTCGTCAGTGCGGAGCTGTCCAAGCCATTCTCTCTCAGTTTCGGCTTGGACTCTCAGGGCTATCAGCTTCATGATCCGTCGCAGTCGCGGAGGATTGGCCCTGTTCCTGGGGATATTGCAGAAATTGAAGCCTATTGTAGAATTTTTCGAAGTGCTGAACGACTACATACTGCATTGATGGAGACATTGTGCAATCCGGTGACCGGGGTGTGCAGTGTTTATTATGACTTCCCATCGGAGGAAAAGCCGCTCTTGGAGGATAAGATTGTGTCTGTGATTGGTTGCATGATGTCACTGTTGAACAAGGCAAGGGAGGATGTGCTTTCGGGAAGATCAGCCATTATGAGCTCCTTTCGAGGAGTTGTGGATGTCGCTGAGGTGGAGGAGGACATGCTTCCTCCACTTGCTGTTTTCAGGAGTGAGCTGAAGAGGTGTTGCGAGAGCTTGCACGTTGCGCTTGAGGACTGGTTGATGCCTGGGGATGACCAGAGCTTGGATGTGTGGAGGAAACTTCAGAGGCTGAAGAATGTGTGTTATGATTCCGGTTTTCCACGCGAGGAGGATTATCCGTGCAATACGCTTTTTGCTAATTGGACTCCTGTTTACTTATCCTCTTCTAGAGAGGATGTTAGGTCCGAAGATTCAGAGGTAGCGTTTTGGAGGGGTGGCCAGGTAACAGAAGAAGGTCTGGAGTGGTTACTGGAGAAGGGATTTAAAACTCTTGTTGATCTTAGGGCAGAGATTGTAAAAGACAATATTTATCAGGCAGCCGTAGATGATGCTATTGCATCAGGGAAGGTGGAATTGATCAGAATTCCAGTTGAAGTTGGGACTGCACCTTCAATGGAGCAGGTTGAGAAATTCGCAAGTTTGGTTTCAGATTGCAGCAAAAACCCAATCTATCTTCATAGCAAGGAAGGTCTCTGGAGAACATCTGCCATGGTTTCCAGATGGAGGCAGCACTTGACTCGCCGTGCTGTTCAGGTTGTCTCCAAGCAGTCGGTTTCTCTTAATGGAGAGGTTGAAAAACCCTCAACTATGCAGAAAAGTTCCCTCCTTGAAAAGAAGAATGAATCACTGGACACAATTCATGGTTCAAATGGGTTGCTACAAAAAAATGATTCTGTAGACAGGGATGAAGCAAATCTAAATGGGACCTGCAATGGCCTTATATCTATCCAAGGTTTGACATCAGTTGAATCAGATGAAAGTGGGGAAAAACCTTTGGTGAACTTCTGCAGGGAAGTTGACCCCCTGAATGCTCAGGTTCCTCCTTGCAATATTTTCTCAAGAAAAGAAATGTCCAGGTTTCTTGAGAGAAAAAATATTGCACCACTCACTTATTTTAATTATCAGTTAAATAGGTTGAAGGTATTACCAATTTCCAAATATATGAATACTAAGATAATGTGGAGAGGTGAGATTGTTGATACTGATTCAGTGCGGGAGGTTGTGGAGGCAGAAAATTCCAATGGGATACCTGATGCAGAACATCTGCTTCCAGAGTTCCAGATCTCTGCTTCTGGCAATGGGAAGTATTTGACCGGTATTGGTAATGGTTCTGTAACTGCAGTCGTAAATGGATTTGGTGAAGGGGAGAAAGGTTCCTTGTTAGCCACTAATTTATCTACTAACGCGAGCAACAATCAATCTGAGAGTGTCTTATCTAAAGCAGTGAAGGAGGAAAGGAAGAGTAATGGTAGAGCCCCTTTAGTTTCAAGTGATGATGAATTGGGATCAATTGAAGGAGATATGTGTGCTTCTGCAACTGGGGTTGTAAGGGTGCAGTCAAGAAAGAAAGCAGAGATGTTTTTAGTACGAACAGATGGATTCTCTTGTACCCGAGAAAAAGTGACAGAATCCTCCCTGGCCTTCACTCATCCAAGTACTCAGCAACAAATGCTTATGTGGAAATCTACACCAAAGACAGTATTAGTGTTAAAGAAGCTTGGGCATGAGCTTATGGAACAAGCTAAAGAGGTACCATATCACAAACAAGTATTTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NAD_kinase

Protein Analysis

726

Amino Acids

80.7

Weight (kDa)

5.67

Isoelectric Point (pI)

43.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTP-NADK	PF22741	247 - 395	3.5e-64	DSP-PTPase phosphatase fused to NAD+ Kinase
Tc-R-P	PF22785	281 - 375	7e-11	Polymorphic toxin system, DSP-PTPase phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21640 AT1G21640
fragaria_vesca	FvH4_2g27820 FvH4_2g27820
malus_domestica	MD08G1160800.v1.1
prunus_persica	Prupe.1G489900_v2.0.a1 Prupe.1G489900_v2.0.a1 Prupe.1G489900_v2.0.a1
pyrus_communis	pycom348g00070
rosa_chinensis	RchiOBHm_Chr6g0296671
rosa_laevigata	RLG00000011671
rosa_multiflora	Rmu_sc0001741.1_g000009
rosa_roxburghii	Rroxscaffold_7G00171270
rosa_rugosa	Rorug06G0264100 Rorug06G0264100
rosa_samantha	Rh6AG375900 Rh6BG384200 Rh6CG389300 Rh6DG376700
rosa_wichuraiana	Rw6G032770 Rw6G032860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1012, 1337
Acc65I	GGTACC	1 cut(s)	2152
AccB1I	GGYRCC	1 cut(s)	2152
AccB7I	CCANNNNNTGG	1 cut(s)	664
AccBSI	CCGCTC	1 cut(s)	421
AccI	GTMKAC	1 cut(s)	1299
AccII	CGCG	3 cut(s)	259, 726, 1808
AciI	CCGC	8 cut(s)	52, 60, 105, 160, 182, 259, 419, 1615
AclWI	GGATC	2 cut(s)	239, 1915
AcoI	YGGCCR	2 cut(s)	30, 838
AcsI	RAATTY	4 cut(s)	312, 984, 1031, 1636
AcuI	CTGAAG	3 cut(s)	617, 668, 713
AfaI	GTAC	4 cut(s)	1989, 2011, 2059, 2154
AfiI	CCNNNNNNNGG	5 cut(s)	278, 374, 409, 664, 1125
AgeI	ACCGGT	1 cut(s)	1715
AjnI	CCWGG	6 cut(s)	24, 277, 646, 840, 1475, 2037
Alw21I	GWGCWC	1 cut(s)	521
Alw26I	GTCTC	3 cut(s)	347, 1097, 1165
AlwI	GGATC	2 cut(s)	239, 1915
AlwNI	CAGNNNCTG	1 cut(s)	691
Ama87I	CYCGRG	1 cut(s)	2013
AoxI	GGCC	5 cut(s)	30, 268, 838, 1336, 2040
ApeKI	GCWGC	3 cut(s)	938, 1056, 1129
ApoI	RAATTY	4 cut(s)	312, 984, 1031, 1636
AsiGI	ACCGGT	1 cut(s)	1715
Asp718I	GGTACC	1 cut(s)	2152
AspLEI	GCGC	1 cut(s)	628
AspS9I	GGNCC	4 cut(s)	145, 269, 804, 1326
AsuC2I	CCSGG	1 cut(s)	376
AsuHPI	GGTGA	5 cut(s)	57, 382, 1411, 1601, 1772
AsuII	TTCGAA	1 cut(s)	319
AvaI	CYCGRG	1 cut(s)	2013
AvaII	GGWCC	3 cut(s)	145, 804, 1326
BaeGI	GKGCMC	1 cut(s)	83
BalI	TGGCCA	2 cut(s)	32, 840
BanI	GGYRCC	1 cut(s)	2152
BanII	GRGCYC	2 cut(s)	521, 1879
Bbv12I	GWGCWC	1 cut(s)	521
BbvCI	CCTCAGC	1 cut(s)	546
BbvI	GCAGC	3 cut(s)	950, 1068, 1141
BccI	CCATC	5 cut(s)	41, 343, 412, 1116, 1991
BceAI	ACGGC	3 cut(s)	23, 926, 1128
BcgI	CGANNNNNNTGC	2 cut(s)	1121, 1155
BciT130I	CCWGG	6 cut(s)	26, 279, 648, 842, 1477, 2039
BciVI	GTATCC	1 cut(s)	1641
BclI	TGATCA	1 cut(s)	978
BcnI	CCSGG	1 cut(s)	376
BcoDI	GTCTC	3 cut(s)	347, 1097, 1165
BfaI	CTAG	1 cut(s)	789
BfmI	CTRYAG	3 cut(s)	1296, 1408, 1740
BfuAI	ACCTGC	2 cut(s)	1012, 1337
BfuI	GTATCC	1 cut(s)	1641
BglII	AGATCT	1 cut(s)	1683
BisI	GCNGC	7 cut(s)	52, 60, 161, 419, 939, 1057, 1130
BlsI	GCNGC	7 cut(s)	53, 61, 162, 420, 940, 1058, 1131
BmcAI	AGTACT	1 cut(s)	2059
Bme1390I	CCNGG	7 cut(s)	26, 279, 376, 648, 842, 1477, 2039
Bme18I	GGWCC	3 cut(s)	145, 804, 1326
BmeT110I	CYCGRG	1 cut(s)	2013
BmgT120I	GGNCC	4 cut(s)	145, 269, 804, 1326
BmiI	GGNNCC	4 cut(s)	1327, 1440, 1777, 2154
BmrFI	CCNGG	7 cut(s)	26, 279, 376, 648, 842, 1477, 2039
BmrI	ACTGGG	1 cut(s)	1950
BmsI	GCATC	4 cut(s)	633, 940, 968, 1645
BmuI	ACTGGG	1 cut(s)	1950
BpmI	CTGGAG	4 cut(s)	71, 881, 893, 1117
Bpu10I	CCTNAGC	2 cut(s)	546, 1434
Bpu14I	TTCGAA	1 cut(s)	319
BpuEI	CTTGAG	5 cut(s)	137, 149, 650, 1444, 1505
BpuMI	CCSGG	1 cut(s)	376
BsaI	GGTCTC	1 cut(s)	1097
BsaJI	CCNNGG	6 cut(s)	278, 375, 647, 1110, 1351, 2037
BsaWI	WCCGGW	3 cut(s)	367, 713, 1715
BsaXI	ACNNNNNCTCC	2 cut(s)	344, 374
Bsc4I	CCNNNNNNNGG	5 cut(s)	278, 374, 409, 664, 1125
Bse118I	RCCGGY	2 cut(s)	147, 1715
Bse1I	ACTGG	6 cut(s)	88, 641, 876, 989, 1254, 1945
Bse3DI	GCAATG	2 cut(s)	1339, 1705
BseBI	CCWGG	6 cut(s)	26, 279, 648, 842, 1477, 2039
BseDI	CCNNGG	6 cut(s)	278, 375, 647, 1110, 1351, 2037
BseGI	GGATG	7 cut(s)	493, 544, 658, 673, 802, 1312, 2050
BseLI	CCNNNNNNNGG	5 cut(s)	278, 374, 409, 664, 1125
BseMI	GCAATG	2 cut(s)	1339, 1705
BseMII	CTCAG	7 cut(s)	108, 220, 239, 537, 1448, 1815, 2075
BseNI	ACTGG	6 cut(s)	88, 641, 876, 989, 1254, 1945
BseRI	GAGGAG	3 cut(s)	543, 569, 743
BseSI	GKGCMC	1 cut(s)	83
BseXI	GCAGC	3 cut(s)	950, 1068, 1141
BsgI	GTGCAG	3 cut(s)	403, 990, 1976
Bsh1236I	CGCG	3 cut(s)	259, 726, 1808
BshFI	GGCC	5 cut(s)	32, 270, 840, 1338, 2042
BshNI	GGYRCC	1 cut(s)	2152
BshTI	ACCGGT	1 cut(s)	1715
BsiHKAI	GWGCWC	1 cut(s)	521
BsiHKCI	CYCGRG	1 cut(s)	2013
BsiSI	CCGG	5 cut(s)	148, 368, 375, 714, 1716
BslFI	GGGAC	2 cut(s)	1015, 1339
BslI	CCNNNNNNNGG	5 cut(s)	278, 374, 409, 664, 1125
BsmAI	GTCTC	3 cut(s)	347, 1097, 1165
BsmFI	GGGAC	2 cut(s)	1015, 1339
BsmI	GAATGC	1 cut(s)	1435
BsnI	GGCC	5 cut(s)	32, 270, 840, 1338, 2042
Bso31I	GGTCTC	1 cut(s)	1097
BsoBI	CYCGRG	1 cut(s)	2013
Bsp119I	TTCGAA	1 cut(s)	319
Bsp1286I	GDGCHC	3 cut(s)	83, 521, 1879
Bsp143I	GATC	6 cut(s)	244, 503, 898, 978, 1683, 1907
Bsp19I	CCATGG	1 cut(s)	1110
BspACI	CCGC	8 cut(s)	52, 60, 105, 160, 182, 259, 419, 1615
BspANI	GGCC	5 cut(s)	32, 270, 840, 1338, 2042
BspCNI	CTCAG	7 cut(s)	107, 219, 238, 538, 1447, 1816, 2074
BspFNI	CGCG	3 cut(s)	259, 726, 1808
BspHI	TCATGA	1 cut(s)	241
BspLI	GGNNCC	4 cut(s)	1327, 1440, 1777, 2154
BspMAI	CTGCAG	2 cut(s)	1412, 1744
BspMI	ACCTGC	2 cut(s)	1012, 1337
BspPI	GGATC	2 cut(s)	239, 1915
BspT104I	TTCGAA	1 cut(s)	319
BspT107I	GGYRCC	1 cut(s)	2152
BspTNI	GGTCTC	1 cut(s)	1097
BsrBI	CCGCTC	1 cut(s)	421
BsrDI	GCAATG	2 cut(s)	1339, 1705
BsrFI	RCCGGY	2 cut(s)	147, 1715
BsrI	ACTGG	6 cut(s)	88, 641, 876, 989, 1254, 1945
BssAI	RCCGGY	2 cut(s)	147, 1715
BssECI	CCNNGG	6 cut(s)	278, 375, 647, 1110, 1351, 2037
BssMI	GATC	6 cut(s)	244, 503, 898, 978, 1683, 1907
BssT1I	CCWWGG	2 cut(s)	1110, 1351
Bst2UI	CCWGG	6 cut(s)	26, 279, 648, 842, 1477, 2039
Bst4CI	ACNGT	2 cut(s)	468, 2101
Bst6I	CTCTTC	3 cut(s)	593, 790, 1856
BstAPI	GCANNNNNTGC	1 cut(s)	2071
BstBI	TTCGAA	1 cut(s)	319
BstC8I	GCNNGC	2 cut(s)	617, 1810
BstDEI	CTNAG	9 cut(s)	94, 206, 225, 546, 902, 1434, 1572, 1824, 2061
BstDSI	CCRYGG	1 cut(s)	1110
BstEII	GGTNACC	1 cut(s)	370
BstF5I	GGATG	7 cut(s)	493, 544, 658, 673, 802, 1312, 2050
BstFNI	CGCG	3 cut(s)	259, 726, 1808
BstHHI	GCGC	1 cut(s)	628
BstKTI	GATC	6 cut(s)	247, 506, 901, 981, 1686, 1910
BstMAI	GTCTC	3 cut(s)	347, 1097, 1165
BstMBI	GATC	6 cut(s)	244, 503, 898, 978, 1683, 1907
BstMWI	GCNNNNNNNGC	5 cut(s)	21, 157, 193, 625, 2071
BstNI	CCWGG	6 cut(s)	26, 279, 648, 842, 1477, 2039
BstNSI	RCATGY	2 cut(s)	12, 565
BstPI	GGTNACC	1 cut(s)	370
BstSCI	CCNGG	7 cut(s)	24, 277, 374, 646, 840, 1475, 2037
BstSFI	CTRYAG	3 cut(s)	1296, 1408, 1740
BstSLI	GKGCMC	1 cut(s)	83
BstUI	CGCG	3 cut(s)	259, 726, 1808
BstV1I	GCAGC	3 cut(s)	950, 1068, 1141
BstX2I	RGATCY	1 cut(s)	1683
BstYI	RGATCY	1 cut(s)	1683
BsuI	GTATCC	1 cut(s)	1641
BsuRI	GGCC	5 cut(s)	32, 270, 840, 1338, 2042
BtgI	CCRYGG	1 cut(s)	1110
BtgZI	GCGATG	1 cut(s)	19
BtsCI	GGATG	7 cut(s)	493, 544, 658, 673, 802, 1312, 2050
BtsI	GCAGTG	2 cut(s)	391, 1851
BtsIMutI	CAGTG	6 cut(s)	184, 391, 464, 1247, 1617, 1851
BveI	ACCTGC	2 cut(s)	1012, 1337
Cac8I	GCNNGC	2 cut(s)	617, 1810
CaiI	CAGNNNCTG	1 cut(s)	691
CciI	TCATGA	1 cut(s)	241
CfoI	GCGC	1 cut(s)	628
Cfr10I	RCCGGY	2 cut(s)	147, 1715
Cfr13I	GGNCC	4 cut(s)	145, 269, 804, 1326
Csp6I	GTAC	4 cut(s)	1988, 2010, 2058, 2153
CspAI	ACCGGT	1 cut(s)	1715
CviAII	CATG	8 cut(s)	9, 19, 242, 457, 562, 1111, 1262, 2126
CviQI	GTAC	4 cut(s)	1988, 2010, 2058, 2153
DdeI	CTNAG	9 cut(s)	94, 206, 225, 546, 902, 1434, 1572, 1824, 2061
DpnI	GATC	6 cut(s)	246, 505, 900, 980, 1685, 1909
DpnII	GATC	6 cut(s)	244, 503, 898, 978, 1683, 1907
DraI	TTTAAA	1 cut(s)	886
EaeI	YGGCCR	2 cut(s)	30, 838
Eam1104I	CTCTTC	3 cut(s)	593, 790, 1856
EarI	CTCTTC	3 cut(s)	593, 790, 1856
Ecl136II	GAGCTC	1 cut(s)	519
Eco130I	CCWWGG	2 cut(s)	1110, 1351
Eco24I	GRGCYC	2 cut(s)	521, 1879
Eco31I	GGTCTC	1 cut(s)	1097
Eco47I	GGWCC	3 cut(s)	145, 804, 1326
Eco53kI	GAGCTC	1 cut(s)	519
Eco57I	CTGAAG	3 cut(s)	617, 668, 713
Eco88I	CYCGRG	1 cut(s)	2013
Eco91I	GGTNACC	1 cut(s)	370
EcoICRI	GAGCTC	1 cut(s)	519
EcoO109I	RGGNCCY	1 cut(s)	1326
EcoO65I	GGTNACC	1 cut(s)	370
EcoRI	GAATTC	1 cut(s)	984
EcoRII	CCWGG	6 cut(s)	24, 277, 646, 840, 1475, 2037
EcoT14I	CCWWGG	2 cut(s)	1110, 1351
EcoT38I	GRGCYC	2 cut(s)	521, 1879
ErhI	CCWWGG	2 cut(s)	1110, 1351
FaeI	CATG	8 cut(s)	12, 22, 245, 460, 565, 1114, 1265, 2129
FalI	AAGNNNNNCTT	2 cut(s)	407, 439
FaqI	GGGAC	2 cut(s)	1015, 1339
FatI	CATG	8 cut(s)	8, 18, 241, 456, 561, 1110, 1261, 2125
FauI	CCCGC	2 cut(s)	112, 1608
FbaI	TGATCA	1 cut(s)	978
FblI	GTMKAC	1 cut(s)	1299
Fnu4HI	GCNGC	7 cut(s)	52, 60, 161, 419, 939, 1057, 1130
FokI	GGATG	7 cut(s)	500, 551, 665, 680, 809, 1319, 2037
FriOI	GRGCYC	2 cut(s)	521, 1879
Fsp4HI	GCNGC	7 cut(s)	52, 60, 161, 419, 939, 1057, 1130
FspBI	CTAG	1 cut(s)	789
GlaI	GCGC	1 cut(s)	627
GluI	GCNGC	7 cut(s)	52, 60, 161, 419, 939, 1057, 1130
GsuI	CTGGAG	4 cut(s)	71, 881, 893, 1117
HaeIII	GGCC	5 cut(s)	32, 270, 840, 1338, 2042
HapII	CCGG	5 cut(s)	148, 368, 375, 714, 1716
HhaI	GCGC	1 cut(s)	628
Hin1II	CATG	8 cut(s)	12, 22, 245, 460, 565, 1114, 1265, 2129
Hin6I	GCGC	1 cut(s)	626
HinP1I	GCGC	1 cut(s)	626
HincII	GTYRAC	1 cut(s)	1420
HindII	GTYRAC	1 cut(s)	1420
HindIII	AAGCTT	1 cut(s)	2117
HpaII	CCGG	5 cut(s)	148, 368, 375, 714, 1716
HphI	GGTGA	5 cut(s)	57, 382, 1411, 1601, 1772
Hpy166II	GTNNAC	4 cut(s)	775, 1300, 1402, 1420
Hpy8I	GTNNAC	4 cut(s)	775, 1300, 1402, 1420
Hpy99I	CGWCG	2 cut(s)	44, 253
HpyCH4III	ACNGT	2 cut(s)	468, 2101
HpyCH4IV	ACGT	1 cut(s)	621
HpyF10VI	GCNNNNNNNGC	5 cut(s)	21, 157, 193, 625, 2071
HpyF3I	CTNAG	9 cut(s)	94, 206, 225, 546, 902, 1434, 1572, 1824, 2061
HpySE526I	ACGT	1 cut(s)	621
Hsp92II	CATG	8 cut(s)	12, 22, 245, 460, 565, 1114, 1265, 2129
HspAI	GCGC	1 cut(s)	626
KpnI	GGTACC	1 cut(s)	2156
Ksp22I	TGATCA	1 cut(s)	978
Kzo9I	GATC	6 cut(s)	244, 503, 898, 978, 1683, 1907
LmnI	GCTCC	3 cut(s)	184, 524, 1018
Lsp1109I	GCAGC	3 cut(s)	950, 1068, 1141
LweI	GCATC	4 cut(s)	633, 940, 968, 1645
MaeI	CTAG	1 cut(s)	789
MaeII	ACGT	1 cut(s)	621
MaeIII	GTNAC	6 cut(s)	370, 462, 844, 867, 1735, 2023
MalI	GATC	6 cut(s)	246, 505, 900, 980, 1685, 1909
MbiI	CCGCTC	1 cut(s)	421
MboI	GATC	6 cut(s)	244, 503, 898, 978, 1683, 1907
MfeI	CAATTG	1 cut(s)	1911
MflI	RGATCY	1 cut(s)	1683
MhlI	GDGCHC	3 cut(s)	83, 521, 1879
MlsI	TGGCCA	2 cut(s)	32, 840
MluNI	TGGCCA	2 cut(s)	32, 840
MlyI	GAGTC	3 cut(s)	215, 760, 1132
Mox20I	TGGCCA	2 cut(s)	32, 840
MscI	TGGCCA	2 cut(s)	32, 840
MseI	TTAA	5 cut(s)	885, 1182, 1518, 1529, 2111
Msp20I	TGGCCA	2 cut(s)	32, 840
MspA1I	CMGCKG	1 cut(s)	54
MspI	CCGG	5 cut(s)	148, 368, 375, 714, 1716
MspR9I	CCNGG	7 cut(s)	26, 279, 376, 648, 842, 1477, 2039
MunI	CAATTG	1 cut(s)	1911
Mva1269I	GAATGC	1 cut(s)	1435
MvaI	CCWGG	6 cut(s)	26, 279, 648, 842, 1477, 2039
MvnI	CGCG	3 cut(s)	259, 726, 1808
MwoI	GCNNNNNNNGC	5 cut(s)	21, 157, 193, 625, 2071
NciI	CCSGG	1 cut(s)	376
NcoI	CCATGG	1 cut(s)	1110
NdeII	GATC	6 cut(s)	244, 503, 898, 978, 1683, 1907
NlaIII	CATG	8 cut(s)	12, 22, 245, 460, 565, 1114, 1265, 2129
NlaIV	GGNNCC	4 cut(s)	1327, 1440, 1777, 2154
NmuCI	GTSAC	3 cut(s)	370, 462, 2023
NspI	RCATGY	2 cut(s)	12, 565
NspV	TTCGAA	1 cut(s)	319
PagI	TCATGA	1 cut(s)	241
PctI	GAATGC	1 cut(s)	1435
PfeI	GAWTC	9 cut(s)	120, 710, 812, 1244, 1292, 1370, 1607, 2001, 2030
PflMI	CCANNNNNTGG	1 cut(s)	664
PinAI	ACCGGT	1 cut(s)	1715
PkrI	GCNGC	7 cut(s)	53, 61, 162, 420, 940, 1058, 1131
PleI	GAGTC	3 cut(s)	215, 760, 1132
PpsI	GAGTC	3 cut(s)	215, 760, 1132
PpuMI	RGGWCCY	1 cut(s)	1326
Psp124BI	GAGCTC	1 cut(s)	521
Psp5II	RGGWCCY	1 cut(s)	1326
Psp6I	CCWGG	6 cut(s)	24, 277, 646, 840, 1475, 2037
PspEI	GGTNACC	1 cut(s)	370
PspGI	CCWGG	6 cut(s)	24, 277, 646, 840, 1475, 2037
PspN4I	GGNNCC	4 cut(s)	1327, 1440, 1777, 2154
PspPI	GGNCC	4 cut(s)	145, 269, 804, 1326
PspPPI	RGGWCCY	1 cut(s)	1326
PstI	CTGCAG	2 cut(s)	1412, 1744
PstNI	CAGNNNCTG	1 cut(s)	691
PsuI	RGATCY	1 cut(s)	1683
RsaI	GTAC	4 cut(s)	1989, 2011, 2059, 2154
RsaNI	GTAC	4 cut(s)	1988, 2010, 2058, 2153
SacI	GAGCTC	1 cut(s)	521
SaqAI	TTAA	5 cut(s)	885, 1182, 1518, 1529, 2111
SatI	GCNGC	7 cut(s)	52, 60, 161, 419, 939, 1057, 1130
Sau3AI	GATC	6 cut(s)	244, 503, 898, 978, 1683, 1907
Sau96I	GGNCC	4 cut(s)	145, 269, 804, 1326
ScaI	AGTACT	1 cut(s)	2059
SchI	GAGTC	3 cut(s)	215, 760, 1132
ScrFI	CCNGG	7 cut(s)	26, 279, 376, 648, 842, 1477, 2039
SduI	GDGCHC	3 cut(s)	83, 521, 1879
SfaNI	GCATC	4 cut(s)	633, 940, 968, 1645
SfcI	CTRYAG	3 cut(s)	1296, 1408, 1740
SfuI	TTCGAA	1 cut(s)	319
SinI	GGWCC	3 cut(s)	145, 804, 1326
SmlI	CTYRAG	5 cut(s)	152, 164, 629, 1459, 1484
SmoI	CTYRAG	5 cut(s)	152, 164, 629, 1459, 1484
SsiI	CCGC	8 cut(s)	52, 60, 105, 160, 182, 259, 419, 1615
SspI	AATATT	3 cut(s)	928, 1453, 1498
SspMI	CTAG	1 cut(s)	789
SstI	GAGCTC	1 cut(s)	521
StyD4I	CCNGG	7 cut(s)	24, 277, 374, 646, 840, 1475, 2037
StyI	CCWWGG	2 cut(s)	1110, 1351
TaaI	ACNGT	2 cut(s)	468, 2101
TaiI	ACGT	1 cut(s)	624
TaqI	TCGA	4 cut(s)	42, 129, 319, 526
TatI	WGTACW	1 cut(s)	2057
TauI	GCSGC	4 cut(s)	54, 62, 163, 421
TfiI	GAWTC	9 cut(s)	120, 710, 812, 1244, 1292, 1370, 1607, 2001, 2030
Tru1I	TTAA	5 cut(s)	885, 1182, 1518, 1529, 2111
Tru9I	TTAA	5 cut(s)	885, 1182, 1518, 1529, 2111
TscAI	CASTG	6 cut(s)	184, 391, 471, 1254, 1617, 1851
TseFI	GTSAC	3 cut(s)	370, 462, 2023
TseI	GCWGC	3 cut(s)	938, 1056, 1129
Tsp45I	GTSAC	3 cut(s)	370, 462, 2023
TspDTI	ATGAA	8 cut(s)	230, 1067, 1250, 1257, 1323, 1392, 1580, 1914
TspGWI	ACGGA	2 cut(s)	237, 729
TspRI	CASTG	6 cut(s)	184, 391, 471, 1254, 1617, 1851
Van91I	CCANNNNNTGG	1 cut(s)	664
VpaK11BI	GGWCC	3 cut(s)	145, 804, 1326
XapI	RAATTY	4 cut(s)	312, 984, 1031, 1636
XbaI	TCTAGA	1 cut(s)	788
XceI	RCATGY	2 cut(s)	12, 565
XmiI	GTMKAC	1 cut(s)	1299
XspI	CTAG	1 cut(s)	789
ZrmI	AGTACT	1 cut(s)	2059

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.