RchiOBHm_Chr6g0282951

protein heterodimerization activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0015702
Physical Location & Seq
Forward (+)
46175856 .. 46177092
1237 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 186 bp
ATGTGTTTTGATTCCAGATCTGCGAGATTCAAGCAGAGTGGGCGTGGAAATGGAGGCAAGGGTTTGGGTAAGGAAGGAGCAAAACGACATTGTAAGGTCTTCCGCGACAGCATCCAGGGCATCAAGCCGGCGACGGCTTGGTTCTCAAGGTCGGCGAGGAGAAGGAGATCGGAAAGCAAGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000228 GO:0000785 GO:0000786 GO:0000788 GO:0000790 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006342 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007049 GO:0008150 GO:0008152 GO:0008213 GO:0009653 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022414 GO:0022607 GO:0030154 GO:0030435 GO:0031298 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031497 GO:0031974 GO:0031981 GO:0032259 GO:0032502 GO:0032991 GO:0032993 GO:0034293 GO:0034622 GO:0034728 GO:0034729 GO:0034968 GO:0036211 GO:0040029 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043596 GO:0043933 GO:0043934 GO:0043935 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0044815 GO:0045814 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051321 GO:0051704 GO:0060255 GO:0061587 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0097159 GO:1901363 GO:1901564 GO:1902679 GO:1903046 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko05034 ko05203 ko05322 map05034 map05203 map05322
Pfam Domains
Protein Families
CENP-T_C

Protein Analysis

61

Amino Acids

6.83

Weight (kDa)

11.66

Isoelectric Point (pI)

86.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 105
AciI CCGC 1 cut(s) 103
AgsI TTSAA 1 cut(s) 31
AjnI CCWGG 1 cut(s) 114
BbsI GAAGAC 1 cut(s) 91
BceAI ACGGC 1 cut(s) 150
BciT130I CCWGG 1 cut(s) 116
BglII AGATCT 1 cut(s) 17
Bme1390I CCNGG 1 cut(s) 116
BmrFI CCNGG 1 cut(s) 116
BmsI GCATC 2 cut(s) 120, 129
BpiI GAAGAC 1 cut(s) 91
BpuEI CTTGAG 1 cut(s) 130
BsaJI CCNNGG 1 cut(s) 115
Bse118I RCCGGY 1 cut(s) 127
BseBI CCWGG 1 cut(s) 116
BseDI CCNNGG 1 cut(s) 115
BseGI GGATG 1 cut(s) 111
BseRI GAGGAG 1 cut(s) 172
Bsh1236I CGCG 1 cut(s) 105
BsiSI CCGG 1 cut(s) 128
Bsp143I GATC 2 cut(s) 17, 167
BspACI CCGC 1 cut(s) 103
BspFNI CGCG 1 cut(s) 105
BsrFI RCCGGY 1 cut(s) 127
BssAI RCCGGY 1 cut(s) 127
BssECI CCNNGG 1 cut(s) 115
BssMI GATC 2 cut(s) 17, 167
Bst2UI CCWGG 1 cut(s) 116
BstC8I GCNNGC 1 cut(s) 129
BstF5I GGATG 1 cut(s) 111
BstFNI CGCG 1 cut(s) 105
BstKTI GATC 2 cut(s) 20, 170
BstMBI GATC 2 cut(s) 17, 167
BstMWI GCNNNNNNNGC 2 cut(s) 40, 117
BstNI CCWGG 1 cut(s) 116
BstSCI CCNGG 1 cut(s) 114
BstUI CGCG 1 cut(s) 105
BstV2I GAAGAC 1 cut(s) 91
BstX2I RGATCY 1 cut(s) 17
BstYI RGATCY 1 cut(s) 17
BtsCI GGATG 1 cut(s) 111
Cac8I GCNNGC 1 cut(s) 129
Cfr10I RCCGGY 1 cut(s) 127
CspCI CAANNNNNGTGG 2 cut(s) 19, 54
CviJI RGCY 2 cut(s) 127, 137
CviKI_1 RGCY 2 cut(s) 127, 137
DpnI GATC 2 cut(s) 19, 169
DpnII GATC 2 cut(s) 17, 167
EcoRII CCWGG 1 cut(s) 114
FalI AAGNNNNNCTT 1 cut(s) 166
FokI GGATG 1 cut(s) 98
HapII CCGG 1 cut(s) 128
HinfI GANTC 2 cut(s) 11, 27
HpaII CCGG 1 cut(s) 128
Hpy188I TCNGA 1 cut(s) 172
Hpy188III TCNNGA 1 cut(s) 15
Hpy99I CGWCG 1 cut(s) 136
HpyAV CCTTC 2 cut(s) 68, 156
HpyF10VI GCNNNNNNNGC 2 cut(s) 40, 117
KroI GCCGGC 1 cut(s) 127
KroNI GCCGGC 1 cut(s) 129
Kzo9I GATC 2 cut(s) 17, 167
LmnI GCTCC 1 cut(s) 77
LpnPI CCDG 4 cut(s) 28, 101, 128, 141
LweI GCATC 2 cut(s) 120, 129
MalI GATC 2 cut(s) 19, 169
MboI GATC 2 cut(s) 17, 167
MboII GAAGA 1 cut(s) 91
MflI RGATCY 1 cut(s) 17
MnlI CCTC 2 cut(s) 47, 150
MroNI GCCGGC 1 cut(s) 127
MspI CCGG 1 cut(s) 128
MspR9I CCNGG 1 cut(s) 116
MvaI CCWGG 1 cut(s) 116
MvnI CGCG 1 cut(s) 105
MwoI GCNNNNNNNGC 2 cut(s) 40, 117
NaeI GCCGGC 1 cut(s) 129
NdeII GATC 2 cut(s) 17, 167
NgoMIV GCCGGC 1 cut(s) 127
PdiI GCCGGC 1 cut(s) 129
PfeI GAWTC 2 cut(s) 11, 27
Psp6I CCWGG 1 cut(s) 114
PspGI CCWGG 1 cut(s) 114
PsuI RGATCY 1 cut(s) 17
Sau3AI GATC 2 cut(s) 17, 167
ScrFI CCNGG 1 cut(s) 116
SetI ASST 2 cut(s) 99, 152
SfaNI GCATC 2 cut(s) 120, 129
SmlI CTYRAG 1 cut(s) 145
SmoI CTYRAG 1 cut(s) 145
SsiI CCGC 1 cut(s) 103
StyD4I CCNGG 1 cut(s) 114
TfiI GAWTC 2 cut(s) 11, 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.