Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008418

Physical Location & Seq

Genomic Coordinates Reverse (-)

9101327 .. 9106701

Gene Structure 5375 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3438 bp

ATGCCGTTGACGCGGTACCAGATACGGAACGAGTACGGCTTGGCCGATCCGGAGCTCTACAAAGCCGCCGATAGAGATGATCCGGAGGCCTTACTCGAAGGCGTCGCCATGGCTGGACTCGTCGGCGTCTTGCGTCAGCTTGGCGACCTTGCCGAGTTTGCTGCTGAAATATTTCATGACTTGCATGAAGAAGTAATGGCAACCGCCACAAGAGGCCACGGTCTAATGGTTCGTGTGCAACAGCTTGAAGCAGATTTTCCTTCAATTGAGAAGGCACTTCTATCTCAAACGAATCATTCGCCATTTTTTTCAAATACAGGTGTTGACTGGCATCCTAATCTGCGTTGCGAACAGAATCTGATCACCCGTGGAGACTTACCTCGCTTTGTAATGGATTCTTATGAAGAATGCCGTGCTCCTCCTCGGTTATTCCTTCTGGACAAGTTTGATGTTGCTGGGGCTGGGGCATGTTTAAAGCGATACACTGATCCGTCATTCTTTAAAGTGGAATCGGCCTACTCATTAGCACCAGCAGATATGCAGAGAGAAAGGAAGATCCGTAAAGTAAAGAAGAAAGGATCACGCTGGAGGAATGGTGAAACCCCAGAAGTTTTACTGCCATCACATGCCAAACTGCATGAGTTATTTCTGGAGGAGCGCATTCAGAATGGTTACAGTGACCCTGCTCGTCGTGTGAAATTAAAGAAAAGACATTTGAATGGATCTGCAGTTGACTCAAAAACCAAGAAAAGTTACATGGATAAATTTATGGAGACTCATTCACCAGAGCGTAAACTGGTTTGTGCAACTTCTGTTACTTCCCCGCTCTTGAATTTGAGCTCAGATAATAAGAATGAGTCAGGGCTTAGAATACTTGACATTAGTATTGTGAGTCCTGCAGAAAAGTCTCCGGAAAGGAGTAGTGCTAGTTCTTCAACTACTAAACACCAAGAAGTCATATCAAAACAATCAATGGATGGTTTGAATGGGGGCTCTTTCTATGGAGAACCAAATTCTGATGGTGGAAGTGACAACAGCTATTCCAACCTTCAAATGGTAGCAGTTGAGAAGGAATTAGAAGTTGATGGAGAAGACAAAACTGAAGGCAGTGTAGAGGGATACAATTCTGATGATTTTCCCAGTGAGGTAGATAATTACGTGGATGCTCTTGCTACTATGGATTCAGAAGTGGATACAGACAATGATAGCAGAGCTAAGAGCAATCTAGGCTTAATGAAGGTTGACAAATGCAGGACAGACTCTGATGCAAATGAGGAGGAACATGTAGAGCTTCAAGCTCAATCTTTGGATTCTCAATCAAATGAGAACTCTTCTTGGTCAGATGACTGGAATAATTCATTCATAAGAGATAGAGCCAGTCTGCACTCTGACACTTTAAGCAATTTGGTTGAGAATACACCTTCAGAGTGTAATGGAGCAGCTAAAGAATTACCATCCACTGAAGCTTGTGGAGCTGAGGATACATGTATTGAGGAAAGCGTAAACCCTGATAGTGGAGATATATCATGCAATAGGATGGTTGGGGAAATGAGTCCTACACAACCACATCCAGACCATGGAGCAAAGTCACCTGTGGCTTCATATGTGGGACCTTTAATAGATGAAACATCCTCCTATAAAATTAAATTTGGTTCTGAATCATTTGACATCAGAGAAAATGGGACAAATCTGGATCATTTCATGACAGTTGTTCCTGATGGTTCTTCCCAGGCTAAGGATGAGTTCACAAATACTTCTCCTATGCTTCCTCTAGTTGAAGCAGATAAAGAAGATTTAGGTGCCACTTCTGATGATTTACCGCATTTGAAAAATGTTGAAGAATTGGCTTCTGTAAATCATAGCGGCAATGATTCTGTGAATAAAGTGTTTCAGACACAATGTGCTGATGAAGATGCTGTGGGAAGCTTCGCCAGTAGAAAGATTGATTCACCACTTTCAAGTATTCCATCTACAGAAGAGCAGCTCTTTCCCTCAGCAATGAAAGAAATACAAACATCTTCAGGTTCTACATTACTGCTTCATAATTCAGATGTTGCAAAGCCTGTCAACAGGGTTTCTGTAGTGGATGATCCTGTTAAACCAACTGCATTCAAATCTGGAGTTATACCATGGAGACGTATCTCAAGAGAGTCATATCCTGGAGGGGATGCTCCAAAGACACATGGCCTAATAGAGCAGAAGGATGCTCCACAGACACATGTCCTAAAAGAGCAGAAGGATGCTCCACAGACACATGTCTTAATGGACCAGCAAATCTCCGTTTTAGATGAGGATATGTCCCACTATGAAGAGAAATTCAAAACTGAAGAGAGATCTAGGACTGTGGATGATGAGGAGATAGGCTTATTCACCAGCAATGCTGATTCAGAGGGAGGAGATTCTGTTTCTATAGAACTTCCATCAAACTCTCCAACTTATTCAGGCCATGGGGATCATGTACCTTCAGCCAATATAGAACCTGCAACAGTTCATGTAGAAGATGTGCGAGCGTCCTCTGCTGCTGTTACCAAATCTGATGATGTCAATGATTTTATTGATACATCTCCAGAGGAAGGAGATTCTGTTTCTGTAGAACTTCCATCGAACCCTCCAACATATTCAGGCCTTGGGAATCTTGTAGTTTCAGACAATATAGTACCTGAAACAGTTCATGTAGAAGATCTTGCTGTATCCTCTGCTGCTGTTGCCAAATCTGATGATGTCAATGATATTGATACATCTCCAGACGCAAATTGTTCTCCACCATTGAATTTTATGAATTTGCATGAATCTCTTCCTGACTTCAGGGATTCCCATCTGAAAGAATCTGAAATGGATGATGTAGCTTCTCCAAAATTCGTGTCAGACTCAGAAATGCAAAAGGAAGCAAGTAAAGTTGAAGTTGTTTCGCCAGATTCAGATTCAGACCCAAGCAAATCAGTTGCTTATAATCCTTCCAGTTCAAAGGTATTTGATGACGATCATAACTTGTCCCTGGATGAGCAGAATGAACACGGTGTGACTGTCTATGATGACCCCACAGCCTCAACATCTTTGGAAATGAGCAATCAGGAGTCAGAGTTGCAATCTCTGGATCAGACTTGTGGAGAGTATGCTGTGTCATCATCTACCTCTGCCCTTCCAGAACCTGACCTCCAAGAAGCTGAAATGAATTTAGACATTTTGTCGGAGTTGCAAGCTAATCATGTTCATATGGAAAATTTGGAAAGAGACGGAGCAAGTGGTCAGCTAGAAGCTTCCTTAGAACGGTCGCCGGAGTTTCAGTCTGATCAACTGGGTATGGAAGATTCACAAGAAGATCAAGCTAGTACTAACTCATTAATTCTCAATATGCACAGATTGGGTTTCCAAATCACCCAGATAAGGAGATATCCAAACTACCGTCCATGGATCACACCAATCAAGAGACATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010638 GO:0016020 GO:0016043 GO:0030029 GO:0030036 GO:0030154 GO:0030832 GO:0030833 GO:0030838 GO:0031209 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0032991 GO:0033043 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048468 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051125 GO:0051127 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0090558 GO:0090626 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1145

Amino Acids

125.79

Weight (kDa)

4.53

Isoelectric Point (pI)

51.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008418)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38440
fragaria_vesca	FvH4_3g27480 FvH4_6g10280 FvH4_6g10280
malus_domestica	MD04G1168300.v1.1 MD12G1181800.v1.1
prunus_persica	Prupe.6G286500_v2.0.a1
pyrus_communis	pycom04g14930 pycom12g16620 pycom12g17100
rosa_chinensis	RchiOBHm_Chr3g0461031 RchiOBHm_Chr3g0461041
rosa_laevigata	RLG00000024956
rosa_multiflora	Rmu_co8405745.1_g000001 Rmu_co8433481.1_g000001
rosa_roxburghii	Rroxscaffold_6G00418920
rosa_rugosa	Rorug03G0048000 Rorug03G0048000
rosa_samantha	Rh3AG105300 Rh3BG109300 Rh3CG110900 Rh3DG111000
rosa_wichuraiana	Rw3G009020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2949
Acc36I	ACCTGC	1 cut(s)	2488
Acc65I	GGTACC	1 cut(s)	15
AccB1I	GGYRCC	2 cut(s)	15, 1799
AccB7I	CCANNNNNTGG	1 cut(s)	1577
AccBSI	CCGCTC	1 cut(s)	826
AccII	CGCG	1 cut(s)	13
AccIII	TCCGGA	3 cut(s)	49, 82, 910
AciI	CCGC	6 cut(s)	13, 66, 204, 824, 1820, 1863
AcoI	YGGCCR	1 cut(s)	42
AcuI	CTGAAG	7 cut(s)	1122, 1407, 1482, 2004, 2346, 2448, 2788
AcyI	GRCGYC	2 cut(s)	102, 126
AdeI	CACNNNGTG	2 cut(s)	1901, 3019
AfaI	GTAC	5 cut(s)	17, 35, 2460, 2658, 3331
AfiI	CCNNNNNNNGG	7 cut(s)	1054, 1514, 1577, 1735, 2573, 3267, 3384
AflIII	ACRYGT	4 cut(s)	1282, 1484, 2218, 2254
AhdI	GACNNNNNGTC	1 cut(s)	3184
AjnI	CCWGG	3 cut(s)	1728, 2158, 2994
AloI	GAACNNNNNNTCC	2 cut(s)	3138, 3170
Alw21I	GWGCWC	3 cut(s)	57, 418, 842
Alw26I	GTCTC	6 cut(s)	366, 767, 912, 2128, 3225, 3421
AlwNI	CAGNNNCTG	3 cut(s)	358, 1262, 3149
Aor13HI	TCCGGA	3 cut(s)	49, 82, 910
AoxI	GGCC	7 cut(s)	42, 87, 214, 513, 2185, 2443, 2623
ApeKI	GCWGC	5 cut(s)	161, 1439, 1981, 2519, 2699
ArsI	GACNNNNNNTTYG	2 cut(s)	2846, 2878
AseI	ATTAAT	1 cut(s)	3341
Asp700I	GAANNNNTTC	3 cut(s)	171, 2667, 2793
Asp718I	GGTACC	1 cut(s)	15
AspLEI	GCGC	1 cut(s)	660
AspS9I	GGNCC	2 cut(s)	1610, 2266
AsuHPI	GGTGA	7 cut(s)	355, 608, 774, 1581, 1941, 2362, 3367
AvaII	GGWCC	2 cut(s)	1610, 2266
BanI	GGYRCC	2 cut(s)	15, 1799
BanII	GRGCYC	3 cut(s)	57, 842, 995
BbsI	GAAGAC	1 cut(s)	1098
Bbv12I	GWGCWC	3 cut(s)	57, 418, 842
BbvCI	CCTCAGC	2 cut(s)	1476, 1993
BbvI	GCAGC	5 cut(s)	148, 1451, 1993, 2506, 2686
BceAI	ACGGC	2 cut(s)	52, 396
BcgI	CGANNNNNNTGC	2 cut(s)	143, 177
BciT130I	CCWGG	3 cut(s)	1730, 2160, 2996
BciVI	GTATCC	4 cut(s)	1112, 1186, 1474, 2701
BclI	TGATCA	2 cut(s)	360, 3289
BcoDI	GTCTC	6 cut(s)	366, 767, 912, 2128, 3225, 3421
BfaI	CTAG	6 cut(s)	927, 1226, 1772, 2337, 3251, 3327
BfmI	CTRYAG	6 cut(s)	726, 897, 1971, 2079, 2409, 2589
BfuAI	ACCTGC	1 cut(s)	2488
BfuI	GTATCC	4 cut(s)	1112, 1186, 1474, 2701
BglII	AGATCT	2 cut(s)	2333, 2680
BisI	GCNGC	7 cut(s)	66, 162, 1440, 1864, 1982, 2520, 2700
BlsI	GCNGC	7 cut(s)	67, 163, 1441, 1865, 1983, 2521, 2701
BmcAI	AGTACT	1 cut(s)	3331
Bme1390I	CCNGG	3 cut(s)	1730, 2160, 2996
Bme18I	GGWCC	2 cut(s)	1610, 2266
BmeRI	GACNNNNNGTC	1 cut(s)	3184
BmgT120I	GGNCC	2 cut(s)	1610, 2266
BmiI	GGNNCC	3 cut(s)	17, 1611, 1801
BmrFI	CCNGG	3 cut(s)	1730, 2160, 2996
BmrI	ACTGGG	2 cut(s)	1134, 3305
BmsI	GCATC	7 cut(s)	340, 1153, 1255, 1903, 2158, 2194, 2230
BmuI	ACTGGG	2 cut(s)	1134, 3305
BoxI	GACNNNNGTC	2 cut(s)	2219, 2255
BpiI	GAAGAC	1 cut(s)	1098
BpmI	CTGGAG	6 cut(s)	607, 671, 2139, 2181, 2550, 2727
Bpu10I	CCTNAGC	3 cut(s)	1476, 1734, 1993
BpuEI	CTTGAG	1 cut(s)	2128
BsaAI	YACGTR	1 cut(s)	1159
BsaBI	GATNNNNATC	2 cut(s)	2814, 2979
BsaHI	GRCGYC	2 cut(s)	102, 126
BsaWI	WCCGGW	3 cut(s)	49, 82, 910
Bsc4I	CCNNNNNNNGG	7 cut(s)	1054, 1514, 1577, 1735, 2573, 3267, 3384
Bse1I	ACTGG	8 cut(s)	332, 801, 1140, 1352, 1377, 1932, 2958, 3300
Bse3DI	GCAATG	3 cut(s)	1873, 2004, 2383
Bse8I	GATNNNNATC	2 cut(s)	2814, 2979
BseAI	TCCGGA	3 cut(s)	49, 82, 910
BseBI	CCWGG	3 cut(s)	1730, 2160, 2996
BseJI	GATNNNNATC	2 cut(s)	2814, 2979
BseLI	CCNNNNNNNGG	7 cut(s)	1054, 1514, 1577, 1735, 2573, 3267, 3384
BseMI	GCAATG	3 cut(s)	1873, 2004, 2383
BseMII	CTCAG	4 cut(s)	855, 1467, 2007, 2883
BseNI	ACTGG	8 cut(s)	332, 801, 1140, 1352, 1377, 1932, 2958, 3300
BseRI	GAGGAG	6 cut(s)	408, 411, 668, 1289, 2369, 2409
BseXI	GCAGC	5 cut(s)	148, 1451, 1993, 2506, 2686
BseYI	CCCAGC	2 cut(s)	455, 461
BsgI	GTGCAG	1 cut(s)	1367
Bsh1236I	CGCG	1 cut(s)	13
Bsh1285I	CGRYCG	1 cut(s)	3272
BshFI	GGCC	7 cut(s)	44, 89, 216, 515, 2187, 2445, 2625
BshNI	GGYRCC	2 cut(s)	15, 1799
BsiEI	CGRYCG	1 cut(s)	3272
BsiHKAI	GWGCWC	3 cut(s)	57, 418, 842
BsiSI	CCGG	4 cut(s)	50, 83, 911, 3275
BslFI	GGGAC	4 cut(s)	1623, 1696, 2284, 2977
BslI	CCNNNNNNNGG	7 cut(s)	1054, 1514, 1577, 1735, 2573, 3267, 3384
BsmAI	GTCTC	6 cut(s)	366, 767, 912, 2128, 3225, 3421
BsmBI	CGTCTC	2 cut(s)	2128, 3225
BsmFI	GGGAC	4 cut(s)	1623, 1696, 2284, 2977
BsmI	GAATGC	3 cut(s)	413, 660, 2108
BsnI	GGCC	7 cut(s)	44, 89, 216, 515, 2187, 2445, 2625
Bsp1286I	GDGCHC	4 cut(s)	57, 418, 842, 995
Bsp13I	TCCGGA	3 cut(s)	49, 82, 910
Bsp19I	CCATGG	5 cut(s)	108, 1576, 2129, 2446, 3407
BspACI	CCGC	6 cut(s)	13, 66, 204, 824, 1820, 1863
BspANI	GGCC	7 cut(s)	44, 89, 216, 515, 2187, 2445, 2625
BspCNI	CTCAG	4 cut(s)	854, 1468, 2006, 2882
BspEI	TCCGGA	3 cut(s)	49, 82, 910
BspFNI	CGCG	1 cut(s)	13
BspHI	TCATGA	2 cut(s)	175, 1701
BspLI	GGNNCC	3 cut(s)	17, 1611, 1801
BspMAI	CTGCAG	2 cut(s)	730, 901
BspMI	ACCTGC	1 cut(s)	2488
BspQI	GCTCTTC	1 cut(s)	1971
BspT107I	GGYRCC	2 cut(s)	15, 1799
BsrBI	CCGCTC	1 cut(s)	826
BsrDI	GCAATG	3 cut(s)	1873, 2004, 2383
BsrI	ACTGG	8 cut(s)	332, 801, 1140, 1352, 1377, 1932, 2958, 3300
BssNI	GRCGYC	2 cut(s)	102, 126
BssT1I	CCWWGG	6 cut(s)	108, 1576, 2129, 2446, 2626, 3407
Bst2UI	CCWGG	3 cut(s)	1730, 2160, 2996
Bst6I	CTCTTC	5 cut(s)	1336, 1971, 2304, 2322, 2799
BstACI	GRCGYC	2 cut(s)	102, 126
BstBAI	YACGTR	1 cut(s)	1159
BstC8I	GCNNGC	2 cut(s)	2508, 3198
BstDEI	CTNAG	8 cut(s)	841, 866, 1215, 1476, 1734, 1993, 2869, 3262
BstDSI	CCRYGG	7 cut(s)	108, 217, 367, 1576, 2129, 2446, 3407
BstFNI	CGCG	1 cut(s)	13
BstHHI	GCGC	1 cut(s)	660
BstMAI	GTCTC	6 cut(s)	366, 767, 912, 2128, 3225, 3421
BstMCI	CGRYCG	1 cut(s)	3272
BstMWI	GCNNNNNNNGC	6 cut(s)	10, 158, 1227, 1472, 2516, 2705
BstNI	CCWGG	3 cut(s)	1730, 2160, 2996
BstNSI	RCATGY	7 cut(s)	471, 629, 1286, 1488, 2222, 2258, 3434
BstPAI	GACNNNNGTC	2 cut(s)	2219, 2255
BstSCI	CCNGG	3 cut(s)	1728, 2158, 2994
BstSFI	CTRYAG	6 cut(s)	726, 897, 1971, 2079, 2409, 2589
BstUI	CGCG	1 cut(s)	13
BstV1I	GCAGC	5 cut(s)	148, 1451, 1993, 2506, 2686
BstV2I	GAAGAC	1 cut(s)	1098
BstX2I	RGATCY	4 cut(s)	555, 722, 2333, 2680
BstYI	RGATCY	4 cut(s)	555, 722, 2333, 2680
BsuI	GTATCC	4 cut(s)	1112, 1186, 1474, 2701
BsuRI	GGCC	7 cut(s)	44, 89, 216, 515, 2187, 2445, 2625
BtgI	CCRYGG	7 cut(s)	108, 217, 367, 1576, 2129, 2446, 3407
BtsI	GCAGTG	1 cut(s)	1114
BtsIMutI	CAGTG	5 cut(s)	483, 682, 1114, 1147, 1458
BveI	ACCTGC	1 cut(s)	2488
Cac8I	GCNNGC	2 cut(s)	2508, 3198
CaiI	CAGNNNCTG	3 cut(s)	358, 1262, 3149
CciI	TCATGA	2 cut(s)	175, 1701
CfoI	GCGC	1 cut(s)	660
Cfr13I	GGNCC	2 cut(s)	1610, 2266
CseI	GACGC	6 cut(s)	19, 91, 115, 122, 2499, 2756
Csp6I	GTAC	5 cut(s)	16, 34, 2459, 2657, 3330
CviQI	GTAC	5 cut(s)	16, 34, 2459, 2657, 3330
DdeI	CTNAG	8 cut(s)	841, 866, 1215, 1476, 1734, 1993, 2869, 3262
DraI	TTTAAA	2 cut(s)	474, 502
DraIII	CACNNNGTG	2 cut(s)	1901, 3019
DriI	GACNNNNNGTC	1 cut(s)	3184
EaeI	YGGCCR	1 cut(s)	42
Eam1104I	CTCTTC	5 cut(s)	1336, 1971, 2304, 2322, 2799
Eam1105I	GACNNNNNGTC	1 cut(s)	3184
EarI	CTCTTC	5 cut(s)	1336, 1971, 2304, 2322, 2799
Ecl136II	GAGCTC	2 cut(s)	55, 840
Eco130I	CCWWGG	6 cut(s)	108, 1576, 2129, 2446, 2626, 3407
Eco147I	AGGCCT	2 cut(s)	89, 2625
Eco24I	GRGCYC	3 cut(s)	57, 842, 995
Eco32I	GATATC	1 cut(s)	3392
Eco47I	GGWCC	2 cut(s)	1610, 2266
Eco53kI	GAGCTC	2 cut(s)	55, 840
Eco57I	CTGAAG	7 cut(s)	1122, 1407, 1482, 2004, 2346, 2448, 2788
EcoICRI	GAGCTC	2 cut(s)	55, 840
EcoO109I	RGGNCCY	1 cut(s)	1610
EcoRII	CCWGG	3 cut(s)	1728, 2158, 2994
EcoRV	GATATC	1 cut(s)	3392
EcoT14I	CCWWGG	6 cut(s)	108, 1576, 2129, 2446, 2626, 3407
EcoT38I	GRGCYC	3 cut(s)	57, 842, 995
ErhI	CCWWGG	6 cut(s)	108, 1576, 2129, 2446, 2626, 3407
Esp3I	CGTCTC	2 cut(s)	2128, 3225
FaqI	GGGAC	4 cut(s)	1623, 1696, 2284, 2977
FauI	CCCGC	1 cut(s)	831
FauNDI	CATATG	2 cut(s)	1603, 3213
FbaI	TGATCA	2 cut(s)	360, 3289
Fnu4HI	GCNGC	7 cut(s)	66, 162, 1440, 1864, 1982, 2520, 2700
FriOI	GRGCYC	3 cut(s)	57, 842, 995
Fsp4HI	GCNGC	7 cut(s)	66, 162, 1440, 1864, 1982, 2520, 2700
FspBI	CTAG	6 cut(s)	927, 1226, 1772, 2337, 3251, 3327
GlaI	GCGC	1 cut(s)	659
GluI	GCNGC	7 cut(s)	66, 162, 1440, 1864, 1982, 2520, 2700
GsaI	CCCAGC	2 cut(s)	459, 465
GsuI	CTGGAG	6 cut(s)	607, 671, 2139, 2181, 2550, 2727
HaeIII	GGCC	7 cut(s)	44, 89, 216, 515, 2187, 2445, 2625
HapII	CCGG	4 cut(s)	50, 83, 911, 3275
HgaI	GACGC	6 cut(s)	19, 91, 115, 122, 2499, 2756
HhaI	GCGC	1 cut(s)	660
Hin1I	GRCGYC	2 cut(s)	102, 126
Hin6I	GCGC	1 cut(s)	658
HinP1I	GCGC	1 cut(s)	658
HincII	GTYRAC	5 cut(s)	9, 325, 733, 1243, 2068
HindII	GTYRAC	5 cut(s)	9, 325, 733, 1243, 2068
HindIII	AAGCTT	3 cut(s)	1464, 1924, 3255
HpaII	CCGG	4 cut(s)	50, 83, 911, 3275
HphI	GGTGA	7 cut(s)	355, 608, 774, 1581, 1941, 2362, 3367
Hpy166II	GTNNAC	8 cut(s)	9, 325, 733, 794, 1243, 1504, 1746, 2068
Hpy8I	GTNNAC	8 cut(s)	9, 325, 733, 794, 1243, 1504, 1746, 2068
Hpy99I	CGWCG	3 cut(s)	107, 125, 693
HpyCH4IV	ACGT	2 cut(s)	1158, 2137
HpyF10VI	GCNNNNNNNGC	6 cut(s)	10, 158, 1227, 1472, 2516, 2705
HpyF3I	CTNAG	8 cut(s)	841, 866, 1215, 1476, 1734, 1993, 2869, 3262
HpySE526I	ACGT	2 cut(s)	1158, 2137
Hsp92I	GRCGYC	2 cut(s)	102, 126
HspAI	GCGC	1 cut(s)	658
Kpn2I	TCCGGA	3 cut(s)	49, 82, 910
KpnI	GGTACC	1 cut(s)	19
Ksp22I	TGATCA	2 cut(s)	360, 3289
LguI	GCTCTTC	1 cut(s)	1971
Lsp1109I	GCAGC	5 cut(s)	148, 1451, 1993, 2506, 2686
LweI	GCATC	7 cut(s)	340, 1153, 1255, 1903, 2158, 2194, 2230
MaeI	CTAG	6 cut(s)	927, 1226, 1772, 2337, 3251, 3327
MaeII	ACGT	2 cut(s)	1158, 2137
MaeIII	GTNAC	8 cut(s)	671, 677, 752, 814, 1028, 1587, 2524, 3019
MbiI	CCGCTC	1 cut(s)	826
MfeI	CAATTG	1 cut(s)	264
MflI	RGATCY	4 cut(s)	555, 722, 2333, 2680
MhlI	GDGCHC	4 cut(s)	57, 418, 842, 995
MmeI	TCCRAC	4 cut(s)	1068, 2456, 2636, 3168
MroI	TCCGGA	3 cut(s)	49, 82, 910
MroXI	GAANNNNTTC	3 cut(s)	171, 2667, 2793
MslI	CAYNNNNRTG	1 cut(s)	717
MspI	CCGG	4 cut(s)	50, 83, 911, 3275
MspR9I	CCNGG	3 cut(s)	1730, 2160, 2996
MunI	CAATTG	1 cut(s)	264
Mva1269I	GAATGC	3 cut(s)	413, 660, 2108
MvaI	CCWGG	3 cut(s)	1730, 2160, 2996
MvnI	CGCG	1 cut(s)	13
MwoI	GCNNNNNNNGC	6 cut(s)	10, 158, 1227, 1472, 2516, 2705
NcoI	CCATGG	5 cut(s)	108, 1576, 2129, 2446, 3407
NdeI	CATATG	2 cut(s)	1603, 3213
NlaIV	GGNNCC	3 cut(s)	17, 1611, 1801
NmeAIII	GCCGAG	1 cut(s)	178
NmuCI	GTSAC	4 cut(s)	677, 1028, 1587, 3019
NspI	RCATGY	7 cut(s)	471, 629, 1286, 1488, 2222, 2258, 3434
PagI	TCATGA	2 cut(s)	175, 1701
PceI	AGGCCT	2 cut(s)	89, 2625
PciI	ACATGT	4 cut(s)	1282, 1484, 2218, 2254
PciSI	GCTCTTC	1 cut(s)	1971
PcsI	WCGNNNNNNNCGW	1 cut(s)	42
PctI	GAATGC	3 cut(s)	413, 660, 2108
PdmI	GAANNNNTTC	3 cut(s)	171, 2667, 2793
PflMI	CCANNNNNTGG	1 cut(s)	1577
PfoI	TCCNGGA	1 cut(s)	2158
PkrI	GCNGC	7 cut(s)	67, 163, 1441, 1865, 1983, 2521, 2701
Ppu21I	YACGTR	1 cut(s)	1159
PpuMI	RGGWCCY	1 cut(s)	1610
PscI	ACATGT	4 cut(s)	1282, 1484, 2218, 2254
PshAI	GACNNNNGTC	2 cut(s)	2219, 2255
PshBI	ATTAAT	1 cut(s)	3341
PsiI	TTATAA	1 cut(s)	2949
Psp124BI	GAGCTC	2 cut(s)	57, 842
Psp5II	RGGWCCY	1 cut(s)	1610
Psp6I	CCWGG	3 cut(s)	1728, 2158, 2994
PspFI	CCCAGC	2 cut(s)	455, 461
PspGI	CCWGG	3 cut(s)	1728, 2158, 2994
PspN4I	GGNNCC	3 cut(s)	17, 1611, 1801
PspPI	GGNCC	2 cut(s)	1610, 2266
PspPPI	RGGWCCY	1 cut(s)	1610
PsrI	GAACNNNNNNTAC	2 cut(s)	913, 945
PstI	CTGCAG	2 cut(s)	730, 901
PstNI	CAGNNNCTG	3 cut(s)	358, 1262, 3149
PsuI	RGATCY	4 cut(s)	555, 722, 2333, 2680
RsaI	GTAC	5 cut(s)	17, 35, 2460, 2658, 3331
RsaNI	GTAC	5 cut(s)	16, 34, 2459, 2657, 3330
RseI	CAYNNNNRTG	1 cut(s)	717
SacI	GAGCTC	2 cut(s)	57, 842
SapI	GCTCTTC	1 cut(s)	1971
SatI	GCNGC	7 cut(s)	66, 162, 1440, 1864, 1982, 2520, 2700
Sau96I	GGNCC	2 cut(s)	1610, 2266
ScaI	AGTACT	1 cut(s)	3331
ScrFI	CCNGG	3 cut(s)	1730, 2160, 2996
SduI	GDGCHC	4 cut(s)	57, 418, 842, 995
SfaNI	GCATC	7 cut(s)	340, 1153, 1255, 1903, 2158, 2194, 2230
SfcI	CTRYAG	6 cut(s)	726, 897, 1971, 2079, 2409, 2589
SinI	GGWCC	2 cut(s)	1610, 2266
SmiMI	CAYNNNNRTG	1 cut(s)	717
SmlI	CTYRAG	1 cut(s)	2143
SmoI	CTYRAG	1 cut(s)	2143
SseBI	AGGCCT	2 cut(s)	89, 2625
SsiI	CCGC	6 cut(s)	13, 66, 204, 824, 1820, 1863
SspI	AATATT	1 cut(s)	171
SspMI	CTAG	6 cut(s)	927, 1226, 1772, 2337, 3251, 3327
SstI	GAGCTC	2 cut(s)	57, 842
StuI	AGGCCT	2 cut(s)	89, 2625
StyD4I	CCNGG	3 cut(s)	1728, 2158, 2994
StyI	CCWWGG	6 cut(s)	108, 1576, 2129, 2446, 2626, 3407
TaiI	ACGT	2 cut(s)	1161, 2140
TaqI	TCGA	2 cut(s)	96, 2603
TatI	WGTACW	1 cut(s)	3329
TauI	GCSGC	2 cut(s)	68, 1866
TscAI	CASTG	5 cut(s)	490, 682, 1114, 1147, 1465
TseFI	GTSAC	4 cut(s)	677, 1028, 1587, 3019
TseI	GCWGC	5 cut(s)	161, 1439, 1981, 2519, 2699
Tsp45I	GTSAC	4 cut(s)	677, 1028, 1587, 3019
TspGWI	ACGGA	5 cut(s)	40, 480, 548, 2269, 3249
TspRI	CASTG	5 cut(s)	490, 682, 1114, 1147, 1465
Van91I	CCANNNNNTGG	1 cut(s)	1577
VpaK11BI	GGWCC	2 cut(s)	1610, 2266
VspI	ATTAAT	1 cut(s)	3341
XceI	RCATGY	7 cut(s)	471, 629, 1286, 1488, 2222, 2258, 3434
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1051
XmnI	GAANNNNTTC	3 cut(s)	171, 2667, 2793
XspI	CTAG	6 cut(s)	927, 1226, 1772, 2337, 3251, 3327
ZrmI	AGTACT	1 cut(s)	3331

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.