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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G40520 AT5G40520 |
| fragaria_vesca | FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 |
| malus_domestica | MD04G1046800.v1.1 |
| prunus_persica | Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 |
| pyrus_communis | pycom04g04060 |
| rosa_chinensis | RchiOBHm_Chr3g0487611 |
| rosa_laevigata | RLG00000022996 |
| rosa_multiflora | Rmu_sc0012412.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00394650 |
| rosa_rugosa | Rorug03G0235000 Rorug03G0235100 Rorug03G0235100 |
| rosa_samantha | Rh3AG283300 Rh3BG319000 Rh3CG317100 Rh3DG315300 |
| rosa_wichuraiana | Rw3G025050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 43, 211 |
| Acc36I | ACCTGC | 1 cut(s) | 365 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1916 |
| AciI | CCGC | 2 cut(s) | 721, 1863 |
| AclI | AACGTT | 1 cut(s) | 9 |
| AclWI | GGATC | 1 cut(s) | 1899 |
| AcsI | RAATTY | 4 cut(s) | 443, 520, 854, 917 |
| AcuI | CTGAAG | 1 cut(s) | 1065 |
| AfaI | GTAC | 4 cut(s) | 588, 654, 695, 757 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 532, 1916 |
| AflIII | ACRYGT | 1 cut(s) | 1164 |
| AjnI | CCWGG | 3 cut(s) | 826, 889, 1552 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1124, 1156, 1739, 1771 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1484, 1516 |
| AluBI | AGCT | 7 cut(s) | 359, 643, 999, 1009, 1062, 1148, 1180 |
| AluI | AGCT | 7 cut(s) | 359, 643, 999, 1009, 1062, 1148, 1180 |
| Alw21I | GWGCWC | 3 cut(s) | 126, 1011, 1246 |
| Alw26I | GTCTC | 9 cut(s) | 29, 51, 197, 567, 611, 836, 899, 1564, 1851 |
| AlwI | GGATC | 1 cut(s) | 1899 |
| Ama87I | CYCGRG | 1 cut(s) | 1806 |
| AoxI | GGCC | 2 cut(s) | 805, 1033 |
| ApeKI | GCWGC | 3 cut(s) | 227, 371, 1180 |
| ApoI | RAATTY | 4 cut(s) | 443, 520, 854, 917 |
| AsuHPI | GGTGA | 5 cut(s) | 341, 889, 1124, 1382, 1805 |
| AvaI | CYCGRG | 1 cut(s) | 1806 |
| BanII | GRGCYC | 1 cut(s) | 1011 |
| BbsI | GAAGAC | 3 cut(s) | 95, 207, 1028 |
| Bbv12I | GWGCWC | 3 cut(s) | 126, 1011, 1246 |
| BbvCI | CCTCAGC | 1 cut(s) | 1305 |
| BbvI | GCAGC | 3 cut(s) | 239, 383, 1167 |
| BccI | CCATC | 3 cut(s) | 587, 1361, 1745 |
| BciT130I | CCWGG | 3 cut(s) | 828, 891, 1554 |
| BciVI | GTATCC | 2 cut(s) | 1114, 1594 |
| BclI | TGATCA | 1 cut(s) | 712 |
| BcoDI | GTCTC | 9 cut(s) | 29, 51, 197, 567, 611, 836, 899, 1564, 1851 |
| BfaI | CTAG | 5 cut(s) | 782, 980, 1004, 1295, 1383 |
| BfmI | CTRYAG | 2 cut(s) | 770, 950 |
| BfuAI | ACCTGC | 1 cut(s) | 365 |
| BfuI | GTATCC | 2 cut(s) | 1114, 1594 |
| BglII | AGATCT | 2 cut(s) | 1291, 1448 |
| BisI | GCNGC | 3 cut(s) | 228, 372, 1181 |
| BlsI | GCNGC | 3 cut(s) | 229, 373, 1182 |
| Bme1390I | CCNGG | 3 cut(s) | 828, 891, 1554 |
| BmeT110I | CYCGRG | 1 cut(s) | 1806 |
| BmrFI | CCNGG | 3 cut(s) | 828, 891, 1554 |
| BmrI | ACTGGG | 2 cut(s) | 1497, 1777 |
| BmsI | GCATC | 2 cut(s) | 729, 1030 |
| BmuI | ACTGGG | 2 cut(s) | 1497, 1777 |
| BpiI | GAAGAC | 3 cut(s) | 95, 207, 1028 |
| Bpu10I | CCTNAGC | 3 cut(s) | 179, 1245, 1305 |
| BpuEI | CTTGAG | 1 cut(s) | 620 |
| BsaI | GGTCTC | 5 cut(s) | 29, 51, 611, 836, 899 |
| BsaJI | CCNNGG | 2 cut(s) | 792, 1553 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 816, 846 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 532, 1916 |
| Bse1I | ACTGG | 4 cut(s) | 594, 1492, 1597, 1772 |
| Bse3DI | GCAATG | 4 cut(s) | 161, 250, 636, 1393 |
| BseBI | CCWGG | 3 cut(s) | 828, 891, 1554 |
| BseDI | CCNNGG | 2 cut(s) | 792, 1553 |
| BseGI | GGATG | 8 cut(s) | 598, 886, 961, 1207, 1336, 1369, 1483, 1777 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 532, 1916 |
| BseMI | GCAATG | 4 cut(s) | 161, 250, 636, 1393 |
| BseMII | CTCAG | 9 cut(s) | 62, 111, 193, 606, 680, 1259, 1296, 1557, 1862 |
| BseNI | ACTGG | 4 cut(s) | 594, 1492, 1597, 1772 |
| BseRI | GAGGAG | 1 cut(s) | 1748 |
| BseXI | GCAGC | 3 cut(s) | 239, 383, 1167 |
| BshFI | GGCC | 2 cut(s) | 807, 1035 |
| BsiHKAI | GWGCWC | 3 cut(s) | 126, 1011, 1246 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1806 |
| BsiSI | CCGG | 1 cut(s) | 167 |
| BslFI | GGGAC | 1 cut(s) | 1570 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 532, 1916 |
| BsmAI | GTCTC | 9 cut(s) | 29, 51, 197, 567, 611, 836, 899, 1564, 1851 |
| BsmFI | GGGAC | 1 cut(s) | 1570 |
| BsnI | GGCC | 2 cut(s) | 807, 1035 |
| Bso31I | GGTCTC | 5 cut(s) | 29, 51, 611, 836, 899 |
| BsoBI | CYCGRG | 1 cut(s) | 1806 |
| Bsp1286I | GDGCHC | 3 cut(s) | 126, 1011, 1246 |
| Bsp1407I | TGTACA | 1 cut(s) | 693 |
| Bsp143I | GATC | 7 cut(s) | 190, 554, 712, 1291, 1448, 1711, 1891 |
| Bsp19I | CCATGG | 1 cut(s) | 792 |
| BspACI | CCGC | 2 cut(s) | 721, 1863 |
| BspANI | GGCC | 2 cut(s) | 807, 1035 |
| BspCNI | CTCAG | 9 cut(s) | 61, 112, 192, 607, 679, 1258, 1297, 1558, 1861 |
| BspHI | TCATGA | 2 cut(s) | 463, 1522 |
| BspMAI | CTGCAG | 2 cut(s) | 774, 954 |
| BspMI | ACCTGC | 1 cut(s) | 365 |
| BspPI | GGATC | 1 cut(s) | 1899 |
| BspTNI | GGTCTC | 5 cut(s) | 29, 51, 611, 836, 899 |
| BsrDI | GCAATG | 4 cut(s) | 161, 250, 636, 1393 |
| BsrGI | TGTACA | 1 cut(s) | 693 |
| BsrI | ACTGG | 4 cut(s) | 594, 1492, 1597, 1772 |
| BssECI | CCNNGG | 2 cut(s) | 792, 1553 |
| BssMI | GATC | 7 cut(s) | 190, 554, 712, 1291, 1448, 1711, 1891 |
| BssT1I | CCWWGG | 1 cut(s) | 792 |
| Bst2UI | CCWGG | 3 cut(s) | 828, 891, 1554 |
| Bst4CI | ACNGT | 4 cut(s) | 544, 561, 847, 910 |
| Bst6I | CTCTTC | 3 cut(s) | 1106, 1196, 1209 |
| BstAUI | TGTACA | 1 cut(s) | 693 |
| BstC8I | GCNNGC | 4 cut(s) | 241, 608, 805, 1001 |
| BstDSI | CCRYGG | 1 cut(s) | 792 |
| BstF5I | GGATG | 8 cut(s) | 598, 886, 961, 1207, 1336, 1369, 1483, 1777 |
| BstKTI | GATC | 7 cut(s) | 193, 557, 715, 1294, 1451, 1714, 1894 |
| BstMAI | GTCTC | 9 cut(s) | 29, 51, 197, 567, 611, 836, 899, 1564, 1851 |
| BstMBI | GATC | 7 cut(s) | 190, 554, 712, 1291, 1448, 1711, 1891 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 236, 1624 |
| BstNI | CCWGG | 3 cut(s) | 828, 891, 1554 |
| BstNSI | RCATGY | 3 cut(s) | 243, 1168, 1622 |
| BstSCI | CCNGG | 3 cut(s) | 826, 889, 1552 |
| BstSFI | CTRYAG | 2 cut(s) | 770, 950 |
| BstV1I | GCAGC | 3 cut(s) | 239, 383, 1167 |
| BstV2I | GAAGAC | 3 cut(s) | 95, 207, 1028 |
| BstX2I | RGATCY | 3 cut(s) | 1291, 1448, 1891 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 793, 1409 |
| BstYI | RGATCY | 3 cut(s) | 1291, 1448, 1891 |
| BsuI | GTATCC | 2 cut(s) | 1114, 1594 |
| BsuRI | GGCC | 2 cut(s) | 807, 1035 |
| BtgI | CCRYGG | 1 cut(s) | 792 |
| BtgZI | GCGATG | 1 cut(s) | 297 |
| BtsCI | GGATG | 8 cut(s) | 598, 886, 961, 1207, 1336, 1369, 1483, 1777 |
| BtsIMutI | CAGTG | 3 cut(s) | 819, 1485, 1590 |
| BveI | ACCTGC | 1 cut(s) | 365 |
| Cac8I | GCNNGC | 4 cut(s) | 241, 608, 805, 1001 |
| CciI | TCATGA | 2 cut(s) | 463, 1522 |
| CsiI | ACCWGGT | 1 cut(s) | 826 |
| Csp6I | GTAC | 4 cut(s) | 587, 653, 694, 756 |
| CviQI | GTAC | 4 cut(s) | 587, 653, 694, 756 |
| DpnI | GATC | 7 cut(s) | 192, 556, 714, 1293, 1450, 1713, 1893 |
| DpnII | GATC | 7 cut(s) | 190, 554, 712, 1291, 1448, 1711, 1891 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 43, 211 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 43, 211 |
| Eam1104I | CTCTTC | 3 cut(s) | 1106, 1196, 1209 |
| EarI | CTCTTC | 3 cut(s) | 1106, 1196, 1209 |
| Ecl136II | GAGCTC | 1 cut(s) | 1009 |
| Eco130I | CCWWGG | 1 cut(s) | 792 |
| Eco147I | AGGCCT | 1 cut(s) | 807 |
| Eco24I | GRGCYC | 1 cut(s) | 1011 |
| Eco31I | GGTCTC | 5 cut(s) | 29, 51, 611, 836, 899 |
| Eco53kI | GAGCTC | 1 cut(s) | 1009 |
| Eco57I | CTGAAG | 1 cut(s) | 1065 |
| Eco88I | CYCGRG | 1 cut(s) | 1806 |
| EcoICRI | GAGCTC | 1 cut(s) | 1009 |
| EcoRII | CCWGG | 3 cut(s) | 826, 889, 1552 |
| EcoT14I | CCWWGG | 1 cut(s) | 792 |
| EcoT38I | GRGCYC | 1 cut(s) | 1011 |
| ErhI | CCWWGG | 1 cut(s) | 792 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 983, 1015 |
| FaqI | GGGAC | 1 cut(s) | 1570 |
| FauNDI | CATATG | 2 cut(s) | 1312, 1725 |
| FbaI | TGATCA | 1 cut(s) | 712 |
| Fnu4HI | GCNGC | 3 cut(s) | 228, 372, 1181 |
| FokI | GGATG | 8 cut(s) | 605, 873, 968, 1214, 1343, 1376, 1490, 1784 |
| FriOI | GRGCYC | 1 cut(s) | 1011 |
| Fsp4HI | GCNGC | 3 cut(s) | 228, 372, 1181 |
| FspBI | CTAG | 5 cut(s) | 782, 980, 1004, 1295, 1383 |
| GluI | GCNGC | 3 cut(s) | 228, 372, 1181 |
| HaeIII | GGCC | 2 cut(s) | 807, 1035 |
| HapII | CCGG | 1 cut(s) | 167 |
| HindIII | AAGCTT | 1 cut(s) | 641 |
| HpaII | CCGG | 1 cut(s) | 167 |
| HphI | GGTGA | 5 cut(s) | 341, 889, 1124, 1382, 1805 |
| HpyAV | CCTTC | 2 cut(s) | 621, 1911 |
| HpyCH4III | ACNGT | 4 cut(s) | 544, 561, 847, 910 |
| HpyCH4IV | ACGT | 2 cut(s) | 9, 568 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 236, 1624 |
| HpySE526I | ACGT | 2 cut(s) | 9, 568 |
| Ksp22I | TGATCA | 1 cut(s) | 712 |
| Kzo9I | GATC | 7 cut(s) | 190, 554, 712, 1291, 1448, 1711, 1891 |
| LmnI | GCTCC | 2 cut(s) | 236, 1059 |
| Lsp1109I | GCAGC | 3 cut(s) | 239, 383, 1167 |
| LweI | GCATC | 2 cut(s) | 729, 1030 |
| MabI | ACCWGGT | 1 cut(s) | 826 |
| MaeI | CTAG | 5 cut(s) | 782, 980, 1004, 1295, 1383 |
| MaeII | ACGT | 2 cut(s) | 9, 568 |
| MalI | GATC | 7 cut(s) | 192, 556, 714, 1293, 1450, 1713, 1893 |
| MboI | GATC | 7 cut(s) | 190, 554, 712, 1291, 1448, 1711, 1891 |
| MfeI | CAATTG | 1 cut(s) | 716 |
| MflI | RGATCY | 3 cut(s) | 1291, 1448, 1891 |
| MhlI | GDGCHC | 3 cut(s) | 126, 1011, 1246 |
| MlyI | GAGTC | 1 cut(s) | 1182 |
| MmeI | TCCRAC | 1 cut(s) | 1710 |
| MseI | TTAA | 6 cut(s) | 54, 486, 645, 1077, 1196, 1931 |
| MslI | CAYNNNNRTG | 6 cut(s) | 316, 468, 507, 1407, 1458, 1595 |
| MspI | CCGG | 1 cut(s) | 167 |
| MspR9I | CCNGG | 3 cut(s) | 828, 891, 1554 |
| MunI | CAATTG | 1 cut(s) | 716 |
| MvaI | CCWGG | 3 cut(s) | 828, 891, 1554 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 236, 1624 |
| NcoI | CCATGG | 1 cut(s) | 792 |
| NdeI | CATATG | 2 cut(s) | 1312, 1725 |
| NdeII | GATC | 7 cut(s) | 190, 554, 712, 1291, 1448, 1711, 1891 |
| NmeAIII | GCCGAG | 1 cut(s) | 1061 |
| NmuCI | GTSAC | 4 cut(s) | 509, 731, 1167, 1442 |
| NspI | RCATGY | 3 cut(s) | 243, 1168, 1622 |
| PaeI | GCATGC | 1 cut(s) | 243 |
| PaeR7I | CTCGAG | 1 cut(s) | 1806 |
| PagI | TCATGA | 2 cut(s) | 463, 1522 |
| PceI | AGGCCT | 1 cut(s) | 807 |
| PciI | ACATGT | 1 cut(s) | 1164 |
| PfeI | GAWTC | 9 cut(s) | 73, 116, 158, 170, 428, 776, 1463, 1814, 1920 |
| PflFI | GACNNNGTC | 1 cut(s) | 1843 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1916 |
| PkrI | GCNGC | 3 cut(s) | 229, 373, 1182 |
| PleI | GAGTC | 1 cut(s) | 1182 |
| PpsI | GAGTC | 1 cut(s) | 1182 |
| PscI | ACATGT | 1 cut(s) | 1164 |
| Psp124BI | GAGCTC | 1 cut(s) | 1011 |
| Psp1406I | AACGTT | 1 cut(s) | 9 |
| Psp6I | CCWGG | 3 cut(s) | 826, 889, 1552 |
| PspGI | CCWGG | 3 cut(s) | 826, 889, 1552 |
| PstI | CTGCAG | 2 cut(s) | 774, 954 |
| PsuI | RGATCY | 3 cut(s) | 1291, 1448, 1891 |
| PsyI | GACNNNGTC | 1 cut(s) | 1843 |
| RsaI | GTAC | 4 cut(s) | 588, 654, 695, 757 |
| RsaNI | GTAC | 4 cut(s) | 587, 653, 694, 756 |
| RseI | CAYNNNNRTG | 6 cut(s) | 316, 468, 507, 1407, 1458, 1595 |
| SacI | GAGCTC | 1 cut(s) | 1011 |
| SaqAI | TTAA | 6 cut(s) | 54, 486, 645, 1077, 1196, 1931 |
| SatI | GCNGC | 3 cut(s) | 228, 372, 1181 |
| Sau3AI | GATC | 7 cut(s) | 190, 554, 712, 1291, 1448, 1711, 1891 |
| SchI | GAGTC | 1 cut(s) | 1182 |
| ScrFI | CCNGG | 3 cut(s) | 828, 891, 1554 |
| SduI | GDGCHC | 3 cut(s) | 126, 1011, 1246 |
| SexAI | ACCWGGT | 1 cut(s) | 826 |
| SfaNI | GCATC | 2 cut(s) | 729, 1030 |
| SfcI | CTRYAG | 2 cut(s) | 770, 950 |
| Sfr274I | CTCGAG | 1 cut(s) | 1806 |
| SlaI | CTCGAG | 1 cut(s) | 1806 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 316, 468, 507, 1407, 1458, 1595 |
| SmlI | CTYRAG | 2 cut(s) | 599, 1806 |
| SmoI | CTYRAG | 2 cut(s) | 599, 1806 |
| SphI | GCATGC | 1 cut(s) | 243 |
| SseBI | AGGCCT | 1 cut(s) | 807 |
| SsiI | CCGC | 2 cut(s) | 721, 1863 |
| SspI | AATATT | 1 cut(s) | 271 |
| SspMI | CTAG | 5 cut(s) | 782, 980, 1004, 1295, 1383 |
| SstI | GAGCTC | 1 cut(s) | 1011 |
| StuI | AGGCCT | 1 cut(s) | 807 |
| StyD4I | CCNGG | 3 cut(s) | 826, 889, 1552 |
| StyI | CCWWGG | 1 cut(s) | 792 |
| TaaI | ACNGT | 4 cut(s) | 544, 561, 847, 910 |
| TaiI | ACGT | 2 cut(s) | 12, 571 |
| TaqI | TCGA | 8 cut(s) | 282, 842, 905, 1011, 1104, 1623, 1807, 1923 |
| TatI | WGTACW | 2 cut(s) | 652, 693 |
| TfiI | GAWTC | 9 cut(s) | 73, 116, 158, 170, 428, 776, 1463, 1814, 1920 |
| Tru1I | TTAA | 6 cut(s) | 54, 486, 645, 1077, 1196, 1931 |
| Tru9I | TTAA | 6 cut(s) | 54, 486, 645, 1077, 1196, 1931 |
| TscAI | CASTG | 3 cut(s) | 819, 1492, 1597 |
| TseFI | GTSAC | 4 cut(s) | 509, 731, 1167, 1442 |
| TseI | GCWGC | 3 cut(s) | 227, 371, 1180 |
| Tsp45I | GTSAC | 4 cut(s) | 509, 731, 1167, 1442 |
| TspDTI | ATGAA | 9 cut(s) | 150, 425, 780, 956, 1218, 1347, 1494, 1590, 1893 |
| TspGWI | ACGGA | 2 cut(s) | 41, 100 |
| TspRI | CASTG | 3 cut(s) | 819, 1492, 1597 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1843 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1916 |
| XapI | RAATTY | 4 cut(s) | 443, 520, 854, 917 |
| XbaI | TCTAGA | 1 cut(s) | 1294 |
| XceI | RCATGY | 3 cut(s) | 243, 1168, 1622 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1715 |
| XhoI | CTCGAG | 1 cut(s) | 1806 |
| XspI | CTAG | 5 cut(s) | 782, 980, 1004, 1295, 1383 |