KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g29490 |
| rosa_chinensis | RchiOBHm_Chr1g0369811 |
| rosa_roxburghii | Rroxscaffold_2G00084220 Rroxscaffold_4G00289570 Rroxscaffold_5G00344170 Rroxscaffold_5G00382040 Rroxscaffold_7G00200370 |
| rosa_rugosa | Rorug01G0336200 Rorug05G0321700 Rorug05G0358200 Rorug07G0079600 |
| rosa_samantha | Rh1AG189800 Rh2AG234700 Rh2AG505600 Rh2CG491000 Rh4DG108500 Rh5BG493100 Rh5CG517000 Rh6CG102900 Rh6DG094200 Rh6DG317700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 106 |
| AcsI | RAATTY | 2 cut(s) | 42, 161 |
| AgsI | TTSAA | 2 cut(s) | 21, 134 |
| AjnI | CCWGG | 1 cut(s) | 108 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 136, 168 |
| AoxI | GGCC | 1 cut(s) | 106 |
| ApoI | RAATTY | 2 cut(s) | 42, 161 |
| AsuHPI | GGTGA | 2 cut(s) | 125, 171 |
| BalI | TGGCCA | 1 cut(s) | 108 |
| BccI | CCATC | 2 cut(s) | 32, 98 |
| BceAI | ACGGC | 1 cut(s) | 200 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 146, 180 |
| BciT130I | CCWGG | 1 cut(s) | 110 |
| Bme1390I | CCNGG | 1 cut(s) | 110 |
| BmrFI | CCNGG | 1 cut(s) | 110 |
| BsaJI | CCNNGG | 2 cut(s) | 109, 182 |
| BseBI | CCWGG | 1 cut(s) | 110 |
| BseDI | CCNNGG | 2 cut(s) | 109, 182 |
| BseGI | GGATG | 1 cut(s) | 43 |
| BshFI | GGCC | 1 cut(s) | 108 |
| BsnI | GGCC | 1 cut(s) | 108 |
| Bsp143I | GATC | 1 cut(s) | 117 |
| BspANI | GGCC | 1 cut(s) | 108 |
| BssECI | CCNNGG | 2 cut(s) | 109, 182 |
| BssMI | GATC | 1 cut(s) | 117 |
| Bst2UI | CCWGG | 1 cut(s) | 110 |
| Bst4CI | ACNGT | 1 cut(s) | 70 |
| BstDSI | CCRYGG | 1 cut(s) | 182 |
| BstF5I | GGATG | 1 cut(s) | 43 |
| BstKTI | GATC | 1 cut(s) | 120 |
| BstMBI | GATC | 1 cut(s) | 117 |
| BstNI | CCWGG | 1 cut(s) | 110 |
| BstSCI | CCNGG | 1 cut(s) | 108 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 34 |
| BsuRI | GGCC | 1 cut(s) | 108 |
| BtgI | CCRYGG | 1 cut(s) | 182 |
| BtsCI | GGATG | 1 cut(s) | 43 |
| CviJI | RGCY | 1 cut(s) | 108 |
| CviKI_1 | RGCY | 1 cut(s) | 108 |
| DpnI | GATC | 1 cut(s) | 119 |
| DpnII | GATC | 1 cut(s) | 117 |
| EaeI | YGGCCR | 1 cut(s) | 106 |
| EcoRII | CCWGG | 1 cut(s) | 108 |
| FaiI | YATR | 4 cut(s) | 35, 122, 159, 193 |
| FokI | GGATG | 1 cut(s) | 50 |
| HaeIII | GGCC | 1 cut(s) | 108 |
| HinfI | GANTC | 1 cut(s) | 77 |
| HphI | GGTGA | 2 cut(s) | 125, 171 |
| HpyCH4III | ACNGT | 1 cut(s) | 70 |
| HpyCH4IV | ACGT | 1 cut(s) | 176 |
| HpySE526I | ACGT | 1 cut(s) | 176 |
| Kzo9I | GATC | 1 cut(s) | 117 |
| LpnPI | CCDG | 2 cut(s) | 95, 122 |
| MaeII | ACGT | 1 cut(s) | 176 |
| MaeIII | GTNAC | 1 cut(s) | 177 |
| MalI | GATC | 1 cut(s) | 119 |
| MboI | GATC | 1 cut(s) | 117 |
| MboII | GAAGA | 2 cut(s) | 17, 146 |
| MlsI | TGGCCA | 1 cut(s) | 108 |
| MluCI | AATT | 5 cut(s) | 42, 123, 137, 148, 161 |
| MluNI | TGGCCA | 1 cut(s) | 108 |
| MlyI | GAGTC | 1 cut(s) | 86 |
| MnlI | CCTC | 2 cut(s) | 55, 64 |
| Mox20I | TGGCCA | 1 cut(s) | 108 |
| MscI | TGGCCA | 1 cut(s) | 108 |
| MseI | TTAA | 1 cut(s) | 72 |
| MslI | CAYNNNNRTG | 1 cut(s) | 32 |
| Msp20I | TGGCCA | 1 cut(s) | 108 |
| MspR9I | CCNGG | 1 cut(s) | 110 |
| MvaI | CCWGG | 1 cut(s) | 110 |
| NdeII | GATC | 1 cut(s) | 117 |
| NmuCI | GTSAC | 1 cut(s) | 177 |
| PleI | GAGTC | 1 cut(s) | 85 |
| PpsI | GAGTC | 1 cut(s) | 85 |
| Psp6I | CCWGG | 1 cut(s) | 108 |
| PspGI | CCWGG | 1 cut(s) | 108 |
| RseI | CAYNNNNRTG | 1 cut(s) | 32 |
| SaqAI | TTAA | 1 cut(s) | 72 |
| Sau3AI | GATC | 1 cut(s) | 117 |
| SchI | GAGTC | 1 cut(s) | 86 |
| ScrFI | CCNGG | 1 cut(s) | 110 |
| SetI | ASST | 1 cut(s) | 179 |
| SgeI | CNNG | 6 cut(s) | 62, 110, 121, 122, 179, 195 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 32 |
| Sse9I | AATT | 5 cut(s) | 42, 123, 137, 148, 161 |
| StyD4I | CCNGG | 1 cut(s) | 108 |
| TaaI | ACNGT | 1 cut(s) | 70 |
| TaiI | ACGT | 1 cut(s) | 179 |
| TasI | AATT | 5 cut(s) | 42, 123, 137, 148, 161 |
| Tru1I | TTAA | 1 cut(s) | 72 |
| Tru9I | TTAA | 1 cut(s) | 72 |
| TseFI | GTSAC | 1 cut(s) | 177 |
| Tsp45I | GTSAC | 1 cut(s) | 177 |
| XapI | RAATTY | 2 cut(s) | 42, 161 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 189 |