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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g29490 |
| rosa_chinensis | RchiOBHm_Chr1g0369811 |
| rosa_roxburghii | Rroxscaffold_2G00084220 Rroxscaffold_4G00289570 Rroxscaffold_5G00344170 Rroxscaffold_5G00382040 Rroxscaffold_7G00200370 |
| rosa_rugosa | Rorug01G0336200 Rorug05G0321700 Rorug05G0358200 Rorug07G0079600 |
| rosa_samantha | Rh1AG189800 Rh2AG234700 Rh2AG505600 Rh2CG491000 Rh4DG108500 Rh5BG493100 Rh5CG517000 Rh6CG102900 Rh6DG094200 Rh6DG317700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 128 |
| AciI | CCGC | 4 cut(s) | 69, 128, 176, 278 |
| AcuI | CTGAAG | 1 cut(s) | 228 |
| AgsI | TTSAA | 1 cut(s) | 224 |
| AhlI | ACTAGT | 1 cut(s) | 232 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 74, 106 |
| AluBI | AGCT | 3 cut(s) | 58, 74, 306 |
| AluI | AGCT | 3 cut(s) | 58, 74, 306 |
| Alw26I | GTCTC | 2 cut(s) | 43, 263 |
| AoxI | GGCC | 1 cut(s) | 297 |
| ApeKI | GCWGC | 2 cut(s) | 58, 71 |
| AspLEI | GCGC | 1 cut(s) | 153 |
| AsuHPI | GGTGA | 1 cut(s) | 58 |
| AsuII | TTCGAA | 1 cut(s) | 188 |
| BbvI | GCAGC | 2 cut(s) | 45, 83 |
| BceAI | ACGGC | 1 cut(s) | 164 |
| BcoDI | GTCTC | 2 cut(s) | 43, 263 |
| BcuI | ACTAGT | 1 cut(s) | 232 |
| BfaI | CTAG | 1 cut(s) | 233 |
| BisI | GCNGC | 3 cut(s) | 59, 72, 279 |
| BlsI | GCNGC | 3 cut(s) | 60, 73, 280 |
| BmiI | GGNNCC | 1 cut(s) | 141 |
| Bpu14I | TTCGAA | 1 cut(s) | 188 |
| Bse1I | ACTGG | 1 cut(s) | 277 |
| BseMII | CTCAG | 1 cut(s) | 119 |
| BseNI | ACTGG | 1 cut(s) | 277 |
| BseXI | GCAGC | 2 cut(s) | 45, 83 |
| Bsh1236I | CGCG | 1 cut(s) | 128 |
| BshFI | GGCC | 1 cut(s) | 299 |
| BsmAI | GTCTC | 2 cut(s) | 43, 263 |
| BsnI | GGCC | 1 cut(s) | 299 |
| Bsp119I | TTCGAA | 1 cut(s) | 188 |
| Bsp143I | GATC | 1 cut(s) | 63 |
| BspACI | CCGC | 4 cut(s) | 69, 128, 176, 278 |
| BspANI | GGCC | 1 cut(s) | 299 |
| BspCNI | CTCAG | 1 cut(s) | 118 |
| BspFNI | CGCG | 1 cut(s) | 128 |
| BspLI | GGNNCC | 1 cut(s) | 141 |
| BspT104I | TTCGAA | 1 cut(s) | 188 |
| BsrI | ACTGG | 1 cut(s) | 277 |
| BssMI | GATC | 1 cut(s) | 63 |
| Bst6I | CTCTTC | 1 cut(s) | 219 |
| BstBI | TTCGAA | 1 cut(s) | 188 |
| BstDEI | CTNAG | 1 cut(s) | 105 |
| BstFNI | CGCG | 1 cut(s) | 128 |
| BstHHI | GCGC | 1 cut(s) | 153 |
| BstKTI | GATC | 1 cut(s) | 66 |
| BstMAI | GTCTC | 2 cut(s) | 43, 263 |
| BstMBI | GATC | 1 cut(s) | 63 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 284 |
| BstNSI | RCATGY | 1 cut(s) | 285 |
| BstUI | CGCG | 1 cut(s) | 128 |
| BstV1I | GCAGC | 2 cut(s) | 45, 83 |
| BsuRI | GGCC | 1 cut(s) | 299 |
| BtsI | GCAGTG | 1 cut(s) | 178 |
| BtsIMutI | CAGTG | 1 cut(s) | 178 |
| CfoI | GCGC | 1 cut(s) | 153 |
| CviAII | CATG | 1 cut(s) | 282 |
| CviJI | RGCY | 7 cut(s) | 58, 74, 111, 140, 213, 299, 306 |
| CviKI_1 | RGCY | 7 cut(s) | 58, 74, 111, 140, 213, 299, 306 |
| DdeI | CTNAG | 1 cut(s) | 105 |
| DpnI | GATC | 1 cut(s) | 65 |
| DpnII | GATC | 1 cut(s) | 63 |
| Eam1104I | CTCTTC | 1 cut(s) | 219 |
| EarI | CTCTTC | 1 cut(s) | 219 |
| Eco57I | CTGAAG | 1 cut(s) | 228 |
| FaeI | CATG | 1 cut(s) | 285 |
| FaiI | YATR | 1 cut(s) | 283 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 74, 106, 201, 233 |
| FatI | CATG | 1 cut(s) | 281 |
| Fnu4HI | GCNGC | 3 cut(s) | 59, 72, 279 |
| Fsp4HI | GCNGC | 3 cut(s) | 59, 72, 279 |
| FspBI | CTAG | 1 cut(s) | 233 |
| GlaI | GCGC | 1 cut(s) | 152 |
| GluI | GCNGC | 3 cut(s) | 59, 72, 279 |
| HaeIII | GGCC | 1 cut(s) | 299 |
| HhaI | GCGC | 1 cut(s) | 153 |
| Hin1II | CATG | 1 cut(s) | 285 |
| Hin6I | GCGC | 1 cut(s) | 151 |
| HinP1I | GCGC | 1 cut(s) | 151 |
| HinfI | GANTC | 2 cut(s) | 197, 239 |
| HphI | GGTGA | 1 cut(s) | 58 |
| Hpy188I | TCNGA | 2 cut(s) | 25, 108 |
| Hpy99I | CGWCG | 2 cut(s) | 119, 122 |
| HpyAV | CCTTC | 3 cut(s) | 52, 184, 203 |
| HpyCH4IV | ACGT | 1 cut(s) | 96 |
| HpyCH4V | TGCA | 1 cut(s) | 287 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 284 |
| HpyF3I | CTNAG | 1 cut(s) | 105 |
| HpySE526I | ACGT | 1 cut(s) | 96 |
| Hsp92II | CATG | 1 cut(s) | 285 |
| HspAI | GCGC | 1 cut(s) | 151 |
| Kzo9I | GATC | 1 cut(s) | 63 |
| LmnI | GCTCC | 1 cut(s) | 145 |
| LpnPI | CCDG | 1 cut(s) | 258 |
| Lsp1109I | GCAGC | 2 cut(s) | 45, 83 |
| MaeI | CTAG | 1 cut(s) | 233 |
| MaeII | ACGT | 1 cut(s) | 96 |
| MalI | GATC | 1 cut(s) | 65 |
| MboI | GATC | 1 cut(s) | 63 |
| MboII | GAAGA | 3 cut(s) | 79, 82, 236 |
| MlyI | GAGTC | 1 cut(s) | 248 |
| MnlI | CCTC | 6 cut(s) | 31, 41, 110, 122, 130, 289 |
| MspA1I | CMGCKG | 1 cut(s) | 58 |
| MvnI | CGCG | 1 cut(s) | 128 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 284 |
| NdeII | GATC | 1 cut(s) | 63 |
| NlaIII | CATG | 1 cut(s) | 285 |
| NlaIV | GGNNCC | 1 cut(s) | 141 |
| NspI | RCATGY | 1 cut(s) | 285 |
| NspV | TTCGAA | 1 cut(s) | 188 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 132 |
| PfeI | GAWTC | 1 cut(s) | 197 |
| PkrI | GCNGC | 3 cut(s) | 60, 73, 280 |
| PleI | GAGTC | 1 cut(s) | 247 |
| PpsI | GAGTC | 1 cut(s) | 247 |
| PspN4I | GGNNCC | 1 cut(s) | 141 |
| PvuII | CAGCTG | 1 cut(s) | 58 |
| SatI | GCNGC | 3 cut(s) | 59, 72, 279 |
| Sau3AI | GATC | 1 cut(s) | 63 |
| SchI | GAGTC | 1 cut(s) | 248 |
| SetI | ASST | 6 cut(s) | 17, 60, 76, 99, 195, 308 |
| SfuI | TTCGAA | 1 cut(s) | 188 |
| SgeI | CNNG | 9 cut(s) | 47, 94, 125, 139, 148, 230, 245, 285, 294 |
| SpeI | ACTAGT | 1 cut(s) | 232 |
| SsiI | CCGC | 4 cut(s) | 69, 128, 176, 278 |
| SspMI | CTAG | 1 cut(s) | 233 |
| TaiI | ACGT | 1 cut(s) | 99 |
| TaqI | TCGA | 6 cut(s) | 51, 120, 135, 159, 188, 257 |
| TauI | GCSGC | 1 cut(s) | 281 |
| TfiI | GAWTC | 1 cut(s) | 197 |
| TscAI | CASTG | 1 cut(s) | 178 |
| TseI | GCWGC | 2 cut(s) | 58, 71 |
| TspDTI | ATGAA | 1 cut(s) | 189 |
| TspGWI | ACGGA | 1 cut(s) | 180 |
| TspRI | CASTG | 1 cut(s) | 178 |
| XceI | RCATGY | 1 cut(s) | 285 |
| XspI | CTAG | 1 cut(s) | 233 |