No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr0c44g0503671 RchiOBHm_Chr2g0141721 RchiOBHm_Chr4g0402131 |
| rosa_roxburghii | Rroxscaffold_1G00044310 Rroxscaffold_7G00168160 |
| rosa_rugosa | Rorug01G0089800 |
| rosa_samantha | Rh1AG107800 Rh2AG238200 Rh2BG532300 Rh5BG224000 Rh5CG334300 Rh5CG338900 Rh6CG231800 Rh6CG232000 Rh7DG420200 |
| rosa_wichuraiana | Rw1G001970 Rw2G022380 Rw5G043560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 193 |
| AcsI | RAATTY | 1 cut(s) | 29 |
| AcuI | CTGAAG | 1 cut(s) | 161 |
| AgsI | TTSAA | 1 cut(s) | 34 |
| ApoI | RAATTY | 1 cut(s) | 29 |
| AsuHPI | GGTGA | 1 cut(s) | 61 |
| BccI | CCATC | 1 cut(s) | 104 |
| BclI | TGATCA | 1 cut(s) | 90 |
| BfaI | CTAG | 1 cut(s) | 74 |
| BfmI | CTRYAG | 2 cut(s) | 42, 173 |
| BsaAI | YACGTR | 1 cut(s) | 106 |
| Bsp143I | GATC | 1 cut(s) | 90 |
| BspACI | CCGC | 1 cut(s) | 193 |
| BspMAI | CTGCAG | 2 cut(s) | 46, 177 |
| BssMI | GATC | 1 cut(s) | 90 |
| Bst4CI | ACNGT | 1 cut(s) | 120 |
| BstBAI | YACGTR | 1 cut(s) | 106 |
| BstKTI | GATC | 1 cut(s) | 93 |
| BstMBI | GATC | 1 cut(s) | 90 |
| BstSFI | CTRYAG | 2 cut(s) | 42, 173 |
| BtsI | GCAGTG | 2 cut(s) | 51, 170 |
| BtsIMutI | CAGTG | 3 cut(s) | 51, 125, 170 |
| CviJI | RGCY | 1 cut(s) | 56 |
| CviKI_1 | RGCY | 1 cut(s) | 56 |
| DpnI | GATC | 1 cut(s) | 92 |
| DpnII | GATC | 1 cut(s) | 90 |
| Eco57I | CTGAAG | 1 cut(s) | 161 |
| FaiI | YATR | 2 cut(s) | 197, 199 |
| FauNDI | CATATG | 1 cut(s) | 197 |
| FbaI | TGATCA | 1 cut(s) | 90 |
| FspBI | CTAG | 1 cut(s) | 74 |
| FspEI | CC | 7 cut(s) | 32, 37, 38, 79, 96, 143, 175 |
| HinfI | GANTC | 2 cut(s) | 18, 38 |
| HphI | GGTGA | 1 cut(s) | 61 |
| Hpy188I | TCNGA | 1 cut(s) | 17 |
| Hpy188III | TCNNGA | 1 cut(s) | 130 |
| HpyCH4III | ACNGT | 1 cut(s) | 120 |
| HpyCH4IV | ACGT | 1 cut(s) | 105 |
| HpyCH4V | TGCA | 3 cut(s) | 44, 64, 175 |
| HpySE526I | ACGT | 1 cut(s) | 105 |
| Ksp22I | TGATCA | 1 cut(s) | 90 |
| Kzo9I | GATC | 1 cut(s) | 90 |
| LpnPI | CCDG | 2 cut(s) | 79, 143 |
| MaeI | CTAG | 1 cut(s) | 74 |
| MaeII | ACGT | 1 cut(s) | 105 |
| MalI | GATC | 1 cut(s) | 92 |
| MboI | GATC | 1 cut(s) | 90 |
| MluCI | AATT | 2 cut(s) | 29, 134 |
| MnlI | CCTC | 1 cut(s) | 45 |
| MseI | TTAA | 1 cut(s) | 98 |
| MslI | CAYNNNNRTG | 1 cut(s) | 108 |
| NdeI | CATATG | 1 cut(s) | 197 |
| NdeII | GATC | 1 cut(s) | 90 |
| PfeI | GAWTC | 2 cut(s) | 18, 38 |
| Ppu21I | YACGTR | 1 cut(s) | 106 |
| PstI | CTGCAG | 2 cut(s) | 46, 177 |
| RseI | CAYNNNNRTG | 1 cut(s) | 108 |
| SaqAI | TTAA | 1 cut(s) | 98 |
| Sau3AI | GATC | 1 cut(s) | 90 |
| SetI | ASST | 2 cut(s) | 98, 108 |
| SfcI | CTRYAG | 2 cut(s) | 42, 173 |
| SgeI | CNNG | 6 cut(s) | 80, 86, 97, 106, 116, 142 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 108 |
| Sse9I | AATT | 2 cut(s) | 29, 134 |
| SsiI | CCGC | 1 cut(s) | 193 |
| SspMI | CTAG | 1 cut(s) | 74 |
| TaaI | ACNGT | 1 cut(s) | 120 |
| TaiI | ACGT | 1 cut(s) | 108 |
| TasI | AATT | 2 cut(s) | 29, 134 |
| TfiI | GAWTC | 2 cut(s) | 18, 38 |
| Tru1I | TTAA | 1 cut(s) | 98 |
| Tru9I | TTAA | 1 cut(s) | 98 |
| TscAI | CASTG | 3 cut(s) | 51, 125, 177 |
| TspRI | CASTG | 3 cut(s) | 51, 125, 177 |
| XapI | RAATTY | 1 cut(s) | 29 |
| XspI | CTAG | 1 cut(s) | 74 |