Rh6CG231800

Belongs to the peptidase M24B family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0013744
Physical Location & Seq
Reverse (-)
39109568 .. 39112308
2741 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG231800.1

Sequence Viewer

Length: 294 bp
ATGTGTCAACAAGCTGAAAAGCAGATGAGCTCTAGTTGGATTCTCATGCGAGTTGGTAGTCTCGGAGTACCTACAACTATTGAATGGCTGAATGATGTTTTGGCCCCTGGTGGGAGAGTTGGCATTGACCCTAGAGGAAGTGACGTTCCACATTCACCTGTTATGTATGCACATCTGATTGTGGAGATCGACAAAACAAAGTTATATGTAGATACTTCCAAACTAGGCATGAGGTGTAGGATCACCTGGCGAATGCGGGTTTCAGGCCATATGACTCCATTCTTTCTGAAGTAG

Protein Analysis

97

Amino Acids

10.96

Weight (kDa)

9.44

Isoelectric Point (pI)

34.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Creatinase_N_2 PF16189 45 - 76 1.1e-07 Creatinase/Prolidase N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 256
AclWI GGATC 1 cut(s) 248
AfaI GTAC 1 cut(s) 69
AfiI CCNNNNNNNGG 1 cut(s) 111
AgsI TTSAA 1 cut(s) 83
AjnI CCWGG 2 cut(s) 106, 245
AjuI GAANNNNNNNTTGG 2 cut(s) 83, 115
AloI GAACNNNNNNTCC 2 cut(s) 129, 161
AluBI AGCT 2 cut(s) 14, 30
AluI AGCT 2 cut(s) 14, 30
Alw21I GWGCWC 1 cut(s) 32
Alw26I GTCTC 1 cut(s) 65
AlwI GGATC 1 cut(s) 248
AoxI GGCC 2 cut(s) 102, 265
AspS9I GGNCC 1 cut(s) 103
AsuHPI GGTGA 2 cut(s) 147, 235
BanII GRGCYC 1 cut(s) 32
Bbv12I GWGCWC 1 cut(s) 32
BciT130I CCWGG 2 cut(s) 108, 247
BcoDI GTCTC 1 cut(s) 65
BfaI CTAG 3 cut(s) 33, 132, 224
Bme1390I CCNGG 2 cut(s) 108, 247
BmgT120I GGNCC 1 cut(s) 103
BmiI GGNNCC 1 cut(s) 105
BmrFI CCNGG 2 cut(s) 108, 247
BsaJI CCNNGG 1 cut(s) 106
Bsc4I CCNNNNNNNGG 1 cut(s) 111
BseBI CCWGG 2 cut(s) 108, 247
BseDI CCNNGG 1 cut(s) 106
BseLI CCNNNNNNNGG 1 cut(s) 111
BshFI GGCC 2 cut(s) 104, 267
BsiHKAI GWGCWC 1 cut(s) 32
BslI CCNNNNNNNGG 1 cut(s) 111
BsmAI GTCTC 1 cut(s) 65
BsmI GAATGC 1 cut(s) 258
BsnI GGCC 2 cut(s) 104, 267
Bsp1286I GDGCHC 1 cut(s) 32
Bsp143I GATC 2 cut(s) 186, 240
BspACI CCGC 1 cut(s) 256
BspANI GGCC 2 cut(s) 104, 267
BspLI GGNNCC 1 cut(s) 105
BspPI GGATC 1 cut(s) 248
BssECI CCNNGG 1 cut(s) 106
BssMI GATC 2 cut(s) 186, 240
Bst2UI CCWGG 2 cut(s) 108, 247
BstKTI GATC 2 cut(s) 189, 243
BstMAI GTCTC 1 cut(s) 65
BstMBI GATC 2 cut(s) 186, 240
BstNI CCWGG 2 cut(s) 108, 247
BstSCI CCNGG 2 cut(s) 106, 245
BsuRI GGCC 2 cut(s) 104, 267
Cfr13I GGNCC 1 cut(s) 103
Csp6I GTAC 1 cut(s) 68
CviAII CATG 2 cut(s) 46, 229
CviJI RGCY 5 cut(s) 14, 30, 88, 104, 267
CviKI_1 RGCY 5 cut(s) 14, 30, 88, 104, 267
CviQI GTAC 1 cut(s) 68
DpnI GATC 2 cut(s) 188, 242
DpnII GATC 2 cut(s) 186, 240
Ecl136II GAGCTC 1 cut(s) 30
Eco24I GRGCYC 1 cut(s) 32
Eco53kI GAGCTC 1 cut(s) 30
EcoICRI GAGCTC 1 cut(s) 30
EcoRII CCWGG 2 cut(s) 106, 245
EcoT38I GRGCYC 1 cut(s) 32
FaeI CATG 2 cut(s) 49, 232
FaiI YATR 8 cut(s) 47, 164, 168, 205, 207, 230, 270, 272
FatI CATG 2 cut(s) 45, 228
FauI CCCGC 1 cut(s) 249
FauNDI CATATG 1 cut(s) 270
FriOI GRGCYC 1 cut(s) 32
FspBI CTAG 3 cut(s) 33, 132, 224
HaeIII GGCC 2 cut(s) 104, 267
Hin1II CATG 2 cut(s) 49, 232
HincII GTYRAC 1 cut(s) 8
HindII GTYRAC 1 cut(s) 8
HinfI GANTC 2 cut(s) 40, 274
HphI GGTGA 2 cut(s) 147, 235
Hpy166II GTNNAC 1 cut(s) 8
Hpy188I TCNGA 3 cut(s) 65, 177, 288
Hpy8I GTNNAC 1 cut(s) 8
HpyCH4IV ACGT 1 cut(s) 144
HpyCH4V TGCA 1 cut(s) 170
HpySE526I ACGT 1 cut(s) 144
Hsp92II CATG 2 cut(s) 49, 232
Kzo9I GATC 2 cut(s) 186, 240
LpnPI CCDG 6 cut(s) 93, 120, 171, 232, 249, 259
MaeI CTAG 3 cut(s) 33, 132, 224
MaeII ACGT 1 cut(s) 144
MaeIII GTNAC 1 cut(s) 140
MalI GATC 2 cut(s) 188, 242
MboI GATC 2 cut(s) 186, 240
MhlI GDGCHC 1 cut(s) 32
MlyI GAGTC 1 cut(s) 268
MmeI TCCRAC 1 cut(s) 17
MnlI CCTC 2 cut(s) 128, 225
MspR9I CCNGG 2 cut(s) 108, 247
Mva1269I GAATGC 1 cut(s) 258
MvaI CCWGG 2 cut(s) 108, 247
NdeI CATATG 1 cut(s) 270
NdeII GATC 2 cut(s) 186, 240
NlaIII CATG 2 cut(s) 49, 232
NlaIV GGNNCC 1 cut(s) 105
NmuCI GTSAC 1 cut(s) 140
PctI GAATGC 1 cut(s) 258
PfeI GAWTC 1 cut(s) 40
PleI GAGTC 1 cut(s) 268
PpsI GAGTC 1 cut(s) 268
Psp124BI GAGCTC 1 cut(s) 32
Psp6I CCWGG 2 cut(s) 106, 245
PspGI CCWGG 2 cut(s) 106, 245
PspN4I GGNNCC 1 cut(s) 105
PspPI GGNCC 1 cut(s) 103
RsaI GTAC 1 cut(s) 69
RsaNI GTAC 1 cut(s) 68
SacI GAGCTC 1 cut(s) 32
Sau3AI GATC 2 cut(s) 186, 240
Sau96I GGNCC 1 cut(s) 103
SchI GAGTC 1 cut(s) 268
ScrFI CCNGG 2 cut(s) 108, 247
SduI GDGCHC 1 cut(s) 32
SetI ASST 7 cut(s) 16, 32, 73, 147, 160, 236, 248
SsiI CCGC 1 cut(s) 256
SspMI CTAG 3 cut(s) 33, 132, 224
SstI GAGCTC 1 cut(s) 32
StyD4I CCNGG 2 cut(s) 106, 245
TaiI ACGT 1 cut(s) 147
TaqI TCGA 1 cut(s) 189
TfiI GAWTC 1 cut(s) 40
TseFI GTSAC 1 cut(s) 140
Tsp45I GTSAC 1 cut(s) 140
XspI CTAG 3 cut(s) 33, 132, 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.