Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015694

Physical Location & Seq

Genomic Coordinates Reverse (-)

61001497 .. 61004439

Gene Structure 2943 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ59624

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGCCGGTGGAAATAACATGACAGATATAATGGTTTCCTCACGTCTAATCCTTTCTCCCATCATGTTACTTATCATCATCATTAGTAGCACCGTTCAAGCGGCCACCCTTGCTCAGCCGCAGCCGGCGGCTGATCTGCTAAATCACTTCTGTTCAAACGACAAAGGTAACTACACCACGACCGACTCCTATAGCACAAACCTTAACCACCTTCTCTCATCCCTTCCCTCTACCAAGGGCAACGACTTTGGCTTTTACAATTCCTCCTATGGCGGAAATACATCATCCGAGGCAATATATGCAATCGGACTGTGTAAAGGAGATATTGGAACCACAAGCGACTGCCTTCAATGCCTCAATGCATCTAGAAGTGCTCTCATGGAGCTATGTCCCAATCAGAAGGAGGCCATTATTTGGTACGACAACTGCATGCTGCGCTACTCAAACCGCTCCATATATGGTGTCATGGAAACGCAGCCAACTTTTGATATGTGGAGCACACAAAGCGTACCATCATCCAAATTTGATATGTTTTTTCGCAATCTCACCATCCTACTCGAAAGATTAGGAATTCAAGCTGCAGCAGATGGTTCTCTGAAGTTTGCGAAAGATAACGCAACCATTCTCAACTATGGTAACGGCGGACTGTCATCCTTAACGGCACTTGTAGAGTGCACTCCTGATTTGTCCGAGTTACAGTGCAGGACTTGCTTGCTCGGGGCTTTTGAAGAATTCCCGGAATGTTGTGATGGAAAGGAGGGTGGGCGAGTTCTTAGACCCAGCTGTAACTTCAACTATCAGCTGGACCAGGTTGACCGGACCAAGACCACAATTCCCGAGTCAGGATCTCCAAGTCAAAGCCCGGGTATAGCTCCAAGTCAAAGCCCGTGGAATTCTTCCCCTATCCCTCGAGAATTACCTGATAAGCCTGACAAAATTCACCCTAAGAGCCGTGCAAGACGTGCTGCTGCTAGCAACCATAGAATAGCCCGTATCGTTATACCATTTGCAGTTGTTGTTTCTATTGGACTAATGATATCCGTAGGCATTTACATGAAAGTAGAGAAGAGAAGGCCACAACCTATCCCAGGGATGCAACCTAATAGTTTTGAGACAATGGGATCCTTGCAATTCGACTGTGGCGACATTCGAGTTGCCACAAATAACTTTTCTGAAGCAAATAAACTTGGAGATGATGAATATGGCACTGTTTACAGGGGTAGTCTTTCCAACGACAAAAGCATAGCAGTGAGGAGGCTTTCAATAAACTATGTGAAAGAGTATATGGAAATTAAGAAAGAGGTTTTGTTAATGGCGCCCAAGCTTCAACATCCAAATCTAGTTGAGCTCCTAGGGTGTGCCTTGGAAGAAAATTCTGAAAGGCTTCTTGTCTACGAGCATTTCCCTAACGCAACTCTTGATCGCATCATATTTGACCGAATGCAGAGCAGACAATGGGATTGGGAGATGCGGTACAACATCATAGTGAGCATTGCACGGGGACTCCTTCACCTTCATGACAGTCACTTTGTTCATGGCGATATCAACGCTAGTAACATTTTGATAGATGCAGAAATGAATCCCAAAATTTCAAATTTTGGCATGGCAAGATTCTTTGCGGCTGATCAAACACAAGGCAACATTAATGGAATTCATCTGCTGAATCTGATGTCTAGCACATACATGGCTCCAGAAGCAATTGTTGGACATTCATCTGCAGAATCTGATGTCTACAGTTTTGGTGCGTTAGTCGTGGAGATAGTAAGTGGACAAGAAATTAGTAGTTTGGCTTCCGAAAAGCTAAATGATAAGGATCTTCTGAGATTTGCATGGAAGAATTGGGCAGAAGGGACAATTAGAAATCTAATAGACCCAACGTTGTGGACTGGTTCAGGAATTGAAGTAATGGAGAGATGCATCAGAATCGGATTATTGTGTATGCAGAGGACTAGAACCGATAGGCCAACCATGTCTTCTGTTACTCAGATGCTTAGTCATTCTTCCGCTATCCCTCTACCTAATAAATTTAGGCATGGTAGCTTTGGGATCATTGGAACCTTGAACAATGTGGAAGGTGTTTCTGATCCAAGGTCTAGAGCAAAAGTTCAACCCTTCATTGCGAAGATGCGGTGTTCCACTACCGGCATCATCAATAAGATACGTAGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

723

Amino Acids

80.1

Weight (kDa)

6.91

Isoelectric Point (pI)

44.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	51 - 150	2e-24	Salt stress response/antifungal
Stress-antifung	PF01657	176 - 267	2.5e-07	Salt stress response/antifungal
Pkinase	PF00069	391 - 662	6.2e-32	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	393 - 663	5.4e-35	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015694)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g25911
rosa_chinensis	RchiOBHm_Chr1g0372241 RchiOBHm_Chr1g0372291
rosa_laevigata	RLG00000026912 RLG00000026913 RLG00000026914
rosa_multiflora	Rmu_sc0001755.1_g000014 Rmu_sc0001755.1_g000017
rosa_roxburghii	Rroxscaffold_4G00285090 Rroxscaffold_4G00285120
rosa_rugosa	Rorug01G0370700
rosa_samantha	Rh1BG342500 Rh1CG356100 Rh1CG356200 Rh1DG373700 Rh1DG373900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1315
AccB7I	CCANNNNNTGG	1 cut(s)	414
AccBSI	CCGCTC	1 cut(s)	450
AccI	GTMKAC	2 cut(s)	1392, 1731
AclI	AACGTT	1 cut(s)	1877
AclWI	GGATC	6 cut(s)	853, 1116, 1129, 1821, 2054, 2078
AcoI	YGGCCR	2 cut(s)	3, 102
AcuI	CTGAAG	2 cut(s)	617, 1194
AcyI	GRCGYC	1 cut(s)	1316
AfaI	GTAC	3 cut(s)	419, 510, 1475
AfiI	CCNNNNNNNGG	3 cut(s)	414, 842, 1088
AjiI	CACGTC	2 cut(s)	44, 962
AjnI	CCWGG	2 cut(s)	807, 1087
AjuI	GAANNNNNNNTTGG	4 cut(s)	1686, 1718, 1957, 1989
AluBI	AGCT	9 cut(s)	385, 578, 783, 802, 872, 1324, 1348, 1801, 2040
AluI	AGCT	9 cut(s)	385, 578, 783, 802, 872, 1324, 1348, 1801, 2040
Alw21I	GWGCWC	4 cut(s)	376, 500, 677, 1350
Alw26I	GTCTC	1 cut(s)	1106
Alw44I	GTGCAC	1 cut(s)	673
AlwI	GGATC	6 cut(s)	853, 1116, 1129, 1821, 2054, 2078
AlwNI	CAGNNNCTG	1 cut(s)	1724
Ama87I	CYCGRG	4 cut(s)	716, 836, 862, 909
AoxI	GGCC	5 cut(s)	3, 102, 405, 1073, 1961
ApaLI	GTGCAC	1 cut(s)	673
ApeKI	GCWGC	7 cut(s)	121, 433, 475, 578, 581, 965, 968
ArsI	GACNNNNNNTTYG	2 cut(s)	1511, 1543
AseI	ATTAAT	1 cut(s)	1644
Asp700I	GAANNNNTTC	1 cut(s)	1383
AspA2I	CCTAGG	1 cut(s)	1351
AspLEI	GCGC	2 cut(s)	438, 1318
AspS9I	GGNCC	2 cut(s)	805, 819
AsuC2I	CCSGG	3 cut(s)	737, 863, 864
AsuHPI	GGTGA	3 cut(s)	538, 932, 1502
AsuNHI	GCTAGC	1 cut(s)	971
AvaI	CYCGRG	4 cut(s)	716, 836, 862, 909
AvaII	GGWCC	2 cut(s)	805, 819
AvrII	CCTAGG	1 cut(s)	1351
BaeGI	GKGCMC	1 cut(s)	677
BamHI	GGATCC	1 cut(s)	1121
BanI	GGYRCC	1 cut(s)	1315
BanII	GRGCYC	1 cut(s)	1350
BarI	GAAGNNNNNNTAC	2 cut(s)	1774, 1806
BbsI	GAAGAC	1 cut(s)	1965
Bbv12I	GWGCWC	4 cut(s)	376, 500, 677, 1350
BbvI	GCAGC	7 cut(s)	133, 420, 487, 565, 593, 952, 955
BccI	CCATC	5 cut(s)	68, 520, 557, 581, 743
BceAI	ACGGC	3 cut(s)	655, 675, 936
BcgI	CGANNNNNNTGC	2 cut(s)	1906, 1940
BciT130I	CCWGG	2 cut(s)	809, 1089
BclI	TGATCA	1 cut(s)	1624
BcnI	CCSGG	3 cut(s)	737, 863, 864
BcoDI	GTCTC	1 cut(s)	1106
BfaI	CTAG	8 cut(s)	366, 972, 1340, 1352, 1551, 1674, 1950, 2094
BfmI	CTRYAG	4 cut(s)	190, 579, 1716, 1732
BfoI	RGCGCY	1 cut(s)	1319
BlnI	CCTAGG	1 cut(s)	1351
BlpI	GCTNAGC	1 cut(s)	114
Bme1390I	CCNGG	5 cut(s)	737, 809, 863, 864, 1089
Bme18I	GGWCC	2 cut(s)	805, 819
BmeT110I	CYCGRG	4 cut(s)	716, 836, 862, 909
BmgBI	CACGTC	2 cut(s)	44, 962
BmgT120I	GGNCC	2 cut(s)	805, 819
BmiI	GGNNCC	5 cut(s)	331, 1123, 1317, 1689, 2056
BmrFI	CCNGG	5 cut(s)	737, 809, 863, 864, 1089
BmtI	GCTAGC	1 cut(s)	975
BpiI	GAAGAC	1 cut(s)	1965
BpmI	CTGGAG	1 cut(s)	1674
Bpu1102I	GCTNAGC	1 cut(s)	114
BpuMI	CCSGG	3 cut(s)	737, 863, 864
BsaAI	YACGTR	1 cut(s)	2162
BsaBI	GATNNNNATC	1 cut(s)	1812
BsaHI	GRCGYC	1 cut(s)	1316
BsaJI	CCNNGG	9 cut(s)	234, 288, 862, 887, 1087, 1088, 1351, 1362, 2087
BsaWI	WCCGGW	1 cut(s)	816
BsaXI	ACNNNNNCTCC	6 cut(s)	248, 278, 1457, 1487, 1488, 1518
Bsc4I	CCNNNNNNNGG	3 cut(s)	414, 842, 1088
Bse118I	RCCGGY	3 cut(s)	5, 124, 2141
Bse1I	ACTGG	1 cut(s)	1891
Bse3DI	GCAATG	2 cut(s)	1491, 2115
Bse8I	GATNNNNATC	1 cut(s)	1812
BseBI	CCWGG	2 cut(s)	809, 1089
BseDI	CCNNGG	9 cut(s)	234, 288, 862, 887, 1087, 1088, 1351, 1362, 2087
BseGI	GGATG	7 cut(s)	218, 284, 515, 549, 650, 1098, 1330
BseJI	GATNNNNATC	1 cut(s)	1812
BseLI	CCNNNNNNNGG	3 cut(s)	414, 842, 1088
BseMI	GCAATG	2 cut(s)	1491, 2115
BseMII	CTCAG	3 cut(s)	128, 1811, 1997
BseNI	ACTGG	1 cut(s)	1891
BseRI	GAGGAG	1 cut(s)	1267
BseSI	GKGCMC	1 cut(s)	677
BseXI	GCAGC	7 cut(s)	133, 420, 487, 565, 593, 952, 955
BseYI	CCCAGC	1 cut(s)	779
BsgI	GTGCAG	1 cut(s)	721
Bsh1285I	CGRYCG	1 cut(s)	183
BshFI	GGCC	5 cut(s)	5, 104, 407, 1075, 1963
BshNI	GGYRCC	1 cut(s)	1315
BsiEI	CGRYCG	1 cut(s)	183
BsiHKAI	GWGCWC	4 cut(s)	376, 500, 677, 1350
BsiHKCI	CYCGRG	4 cut(s)	716, 836, 862, 909
BsiSI	CCGG	6 cut(s)	6, 125, 737, 817, 863, 2142
BslFI	GGGAC	3 cut(s)	375, 1515, 1864
BslI	CCNNNNNNNGG	3 cut(s)	414, 842, 1088
BsmAI	GTCTC	1 cut(s)	1106
BsmFI	GGGAC	3 cut(s)	375, 1515, 1864
BsmI	GAATGC	1 cut(s)	1446
BsnI	GGCC	5 cut(s)	5, 104, 407, 1075, 1963
BsoBI	CYCGRG	4 cut(s)	716, 836, 862, 909
Bsp1286I	GDGCHC	4 cut(s)	376, 500, 677, 1350
Bsp143I	GATC	8 cut(s)	133, 845, 1121, 1420, 1624, 1813, 2046, 2083
Bsp1720I	GCTNAGC	1 cut(s)	114
BspANI	GGCC	5 cut(s)	5, 104, 407, 1075, 1963
BspCNI	CTCAG	3 cut(s)	127, 1812, 1996
BspHI	TCATGA	1 cut(s)	1516
BspLI	GGNNCC	5 cut(s)	331, 1123, 1317, 1689, 2056
BspMAI	CTGCAG	2 cut(s)	583, 1720
BspOI	GCTAGC	1 cut(s)	975
BspPI	GGATC	6 cut(s)	853, 1116, 1129, 1821, 2054, 2078
BspT107I	GGYRCC	1 cut(s)	1315
BsrBI	CCGCTC	1 cut(s)	450
BsrDI	GCAATG	2 cut(s)	1491, 2115
BsrFI	RCCGGY	3 cut(s)	5, 124, 2141
BsrI	ACTGG	1 cut(s)	1891
BssAI	RCCGGY	3 cut(s)	5, 124, 2141
BssECI	CCNNGG	9 cut(s)	234, 288, 862, 887, 1087, 1088, 1351, 1362, 2087
BssMI	GATC	8 cut(s)	133, 845, 1121, 1420, 1624, 1813, 2046, 2083
BssNI	GRCGYC	1 cut(s)	1316
BssT1I	CCWWGG	4 cut(s)	234, 1351, 1362, 2087
Bst2UI	CCWGG	2 cut(s)	809, 1089
Bst4CI	ACNGT	8 cut(s)	94, 312, 648, 699, 1139, 1210, 1523, 1736
Bst6I	CTCTTC	1 cut(s)	1061
BstACI	GRCGYC	1 cut(s)	1316
BstAPI	GCANNNNNTGC	3 cut(s)	299, 708, 962
BstBAI	YACGTR	1 cut(s)	2162
BstC8I	GCNNGC	4 cut(s)	126, 431, 713, 973
BstDEI	CTNAG	6 cut(s)	114, 773, 945, 1820, 1983, 1991
BstDSI	CCRYGG	1 cut(s)	887
BstENI	CCTNNNNNAGG	1 cut(s)	1086
BstF5I	GGATG	7 cut(s)	218, 284, 515, 549, 650, 1098, 1330
BstH2I	RGCGCY	1 cut(s)	1319
BstHHI	GCGC	2 cut(s)	438, 1318
BstKTI	GATC	8 cut(s)	136, 848, 1124, 1423, 1627, 1816, 2049, 2086
BstMAI	GTCTC	1 cut(s)	1106
BstMBI	GATC	8 cut(s)	133, 845, 1121, 1420, 1624, 1813, 2046, 2083
BstMCI	CGRYCG	1 cut(s)	183
BstMWI	GCNNNNNNNGC	8 cut(s)	110, 299, 351, 435, 504, 708, 962, 1694
BstNI	CCWGG	2 cut(s)	809, 1089
BstNSI	RCATGY	1 cut(s)	433
BstSCI	CCNGG	5 cut(s)	735, 807, 861, 862, 1087
BstSFI	CTRYAG	4 cut(s)	190, 579, 1716, 1732
BstSLI	GKGCMC	1 cut(s)	677
BstSNI	TACGTA	1 cut(s)	2162
BstV1I	GCAGC	7 cut(s)	133, 420, 487, 565, 593, 952, 955
BstV2I	GAAGAC	1 cut(s)	1965
BstX2I	RGATCY	3 cut(s)	845, 1121, 1813
BstXI	CCANNNNNNTGG	1 cut(s)	1881
BstYI	RGATCY	3 cut(s)	845, 1121, 1813
BsuRI	GGCC	5 cut(s)	5, 104, 407, 1075, 1963
BtgI	CCRYGG	1 cut(s)	887
BtrI	CACGTC	2 cut(s)	44, 962
BtsCI	GGATG	7 cut(s)	218, 284, 515, 549, 650, 1098, 1330
BtsI	GCAGTG	1 cut(s)	1254
BtsIMutI	CAGTG	3 cut(s)	704, 1206, 1254
Cac8I	GCNNGC	4 cut(s)	126, 431, 713, 973
CaiI	CAGNNNCTG	1 cut(s)	1724
CciI	TCATGA	1 cut(s)	1516
CfoI	GCGC	2 cut(s)	438, 1318
Cfr10I	RCCGGY	3 cut(s)	5, 124, 2141
Cfr13I	GGNCC	2 cut(s)	805, 819
Cfr9I	CCCGGG	1 cut(s)	862
CsiI	ACCWGGT	1 cut(s)	807
Csp6I	GTAC	3 cut(s)	418, 509, 1474
CspCI	CAANNNNNGTGG	2 cut(s)	869, 904
CviQI	GTAC	3 cut(s)	418, 509, 1474
DdeI	CTNAG	6 cut(s)	114, 773, 945, 1820, 1983, 1991
DinI	GGCGCC	1 cut(s)	1317
DpnI	GATC	8 cut(s)	135, 847, 1123, 1422, 1626, 1815, 2048, 2085
DpnII	GATC	8 cut(s)	133, 845, 1121, 1420, 1624, 1813, 2046, 2083
EaeI	YGGCCR	2 cut(s)	3, 102
Eam1104I	CTCTTC	1 cut(s)	1061
EarI	CTCTTC	1 cut(s)	1061
EciI	GGCGGA	2 cut(s)	288, 657
Ecl136II	GAGCTC	1 cut(s)	1348
Eco105I	TACGTA	1 cut(s)	2162
Eco130I	CCWWGG	4 cut(s)	234, 1351, 1362, 2087
Eco24I	GRGCYC	1 cut(s)	1350
Eco32I	GATATC	2 cut(s)	1038, 1543
Eco47I	GGWCC	2 cut(s)	805, 819
Eco53kI	GAGCTC	1 cut(s)	1348
Eco57I	CTGAAG	2 cut(s)	617, 1194
Eco88I	CYCGRG	4 cut(s)	716, 836, 862, 909
EcoICRI	GAGCTC	1 cut(s)	1348
EcoNI	CCTNNNNNAGG	1 cut(s)	1086
EcoRI	GAATTC	4 cut(s)	570, 731, 892, 1650
EcoRII	CCWGG	2 cut(s)	807, 1087
EcoRV	GATATC	2 cut(s)	1038, 1543
EcoT14I	CCWWGG	4 cut(s)	234, 1351, 1362, 2087
EcoT22I	ATGCAT	2 cut(s)	364, 1919
EcoT38I	GRGCYC	1 cut(s)	1350
EgeI	GGCGCC	1 cut(s)	1317
EheI	GGCGCC	1 cut(s)	1317
ErhI	CCWWGG	4 cut(s)	234, 1351, 1362, 2087
FaqI	GGGAC	3 cut(s)	375, 1515, 1864
FbaI	TGATCA	1 cut(s)	1624
FblI	GTMKAC	2 cut(s)	1392, 1731
FokI	GGATG	7 cut(s)	205, 271, 502, 536, 637, 1105, 1317
FriOI	GRGCYC	1 cut(s)	1350
FspBI	CTAG	8 cut(s)	366, 972, 1340, 1352, 1551, 1674, 1950, 2094
GlaI	GCGC	2 cut(s)	437, 1317
GsaI	CCCAGC	1 cut(s)	783
GsuI	CTGGAG	1 cut(s)	1674
HaeII	RGCGCY	1 cut(s)	1319
HaeIII	GGCC	5 cut(s)	5, 104, 407, 1075, 1963
HapII	CCGG	6 cut(s)	6, 125, 737, 817, 863, 2142
HhaI	GCGC	2 cut(s)	438, 1318
Hin1I	GRCGYC	1 cut(s)	1316
Hin6I	GCGC	2 cut(s)	436, 1316
HinP1I	GCGC	2 cut(s)	436, 1316
HincII	GTYRAC	1 cut(s)	814
HindII	GTYRAC	1 cut(s)	814
HindIII	AAGCTT	1 cut(s)	1322
HinfI	GANTC	8 cut(s)	185, 839, 1503, 1579, 1611, 1663, 1721, 1923
HpaII	CCGG	6 cut(s)	6, 125, 737, 817, 863, 2142
HphI	GGTGA	3 cut(s)	538, 932, 1502
Hpy166II	GTNNAC	7 cut(s)	675, 814, 1213, 1393, 1732, 1769, 1884
Hpy8I	GTNNAC	7 cut(s)	675, 814, 1213, 1393, 1732, 1769, 1884
HpyCH4III	ACNGT	8 cut(s)	94, 312, 648, 699, 1139, 1210, 1523, 1736
HpyCH4IV	ACGT	4 cut(s)	43, 961, 1877, 2161
HpyF10VI	GCNNNNNNNGC	8 cut(s)	110, 299, 351, 435, 504, 708, 962, 1694
HpyF3I	CTNAG	6 cut(s)	114, 773, 945, 1820, 1983, 1991
HpySE526I	ACGT	4 cut(s)	43, 961, 1877, 2161
Hsp92I	GRCGYC	1 cut(s)	1316
HspAI	GCGC	2 cut(s)	436, 1316
KasI	GGCGCC	1 cut(s)	1315
KroI	GCCGGC	1 cut(s)	124
KroNI	GCCGGC	1 cut(s)	126
Ksp22I	TGATCA	1 cut(s)	1624
Kzo9I	GATC	8 cut(s)	133, 845, 1121, 1420, 1624, 1813, 2046, 2083
LmnI	GCTCC	6 cut(s)	382, 455, 495, 877, 1353, 1693
Lsp1109I	GCAGC	7 cut(s)	133, 420, 487, 565, 593, 952, 955
MabI	ACCWGGT	1 cut(s)	807
MaeI	CTAG	8 cut(s)	366, 972, 1340, 1352, 1551, 1674, 1950, 2094
MaeII	ACGT	4 cut(s)	43, 961, 1877, 2161
MaeIII	GTNAC	8 cut(s)	66, 167, 635, 693, 785, 1523, 1553, 1978
MalI	GATC	8 cut(s)	135, 847, 1123, 1422, 1626, 1815, 2048, 2085
MbiI	CCGCTC	1 cut(s)	450
MboI	GATC	8 cut(s)	133, 845, 1121, 1420, 1624, 1813, 2046, 2083
MboII	GAAGA	9 cut(s)	740, 888, 1078, 1379, 1808, 1846, 1965, 1992, 2134
MfeI	CAATTG	1 cut(s)	1698
MflI	RGATCY	3 cut(s)	845, 1121, 1813
MhlI	GDGCHC	4 cut(s)	376, 500, 677, 1350
Mly113I	GGCGCC	1 cut(s)	1316
MlyI	GAGTC	3 cut(s)	179, 848, 1497
MmeI	TCCRAC	2 cut(s)	1254, 1684
Mph1103I	ATGCAT	2 cut(s)	364, 1919
MroNI	GCCGGC	1 cut(s)	124
MroXI	GAANNNNTTC	1 cut(s)	1383
MseI	TTAA	5 cut(s)	204, 656, 1293, 1310, 1644
MslI	CAYNNNNRTG	5 cut(s)	1052, 1247, 1484, 1515, 1682
MspA1I	CMGCKG	2 cut(s)	783, 802
MspI	CCGG	6 cut(s)	6, 125, 737, 817, 863, 2142
MspR9I	CCNGG	5 cut(s)	737, 809, 863, 864, 1089
MunI	CAATTG	1 cut(s)	1698
Mva1269I	GAATGC	1 cut(s)	1446
MvaI	CCWGG	2 cut(s)	809, 1089
MwoI	GCNNNNNNNGC	8 cut(s)	110, 299, 351, 435, 504, 708, 962, 1694
NaeI	GCCGGC	1 cut(s)	126
NarI	GGCGCC	1 cut(s)	1316
NciI	CCSGG	3 cut(s)	737, 863, 864
NdeII	GATC	8 cut(s)	133, 845, 1121, 1420, 1624, 1813, 2046, 2083
NgoMIV	GCCGGC	1 cut(s)	124
NheI	GCTAGC	1 cut(s)	971
NlaIV	GGNNCC	5 cut(s)	331, 1123, 1317, 1689, 2056
NmuCI	GTSAC	1 cut(s)	1523
NsiI	ATGCAT	2 cut(s)	364, 1919
NspI	RCATGY	1 cut(s)	433
PaeI	GCATGC	1 cut(s)	433
PaeR7I	CTCGAG	1 cut(s)	909
PagI	TCATGA	1 cut(s)	1516
PasI	CCCWGGG	1 cut(s)	1088
PcsI	WCGNNNNNNNCGW	1 cut(s)	1140
PctI	GAATGC	1 cut(s)	1446
PdiI	GCCGGC	1 cut(s)	126
PdmI	GAANNNNTTC	1 cut(s)	1383
PfeI	GAWTC	5 cut(s)	1579, 1611, 1663, 1721, 1923
PflMI	CCANNNNNTGG	1 cut(s)	414
PfoI	TCCNGGA	1 cut(s)	735
PleI	GAGTC	3 cut(s)	179, 847, 1497
PluTI	GGCGCC	1 cut(s)	1319
PpsI	GAGTC	3 cut(s)	179, 847, 1497
Ppu21I	YACGTR	1 cut(s)	2162
PshBI	ATTAAT	1 cut(s)	1644
Psp124BI	GAGCTC	1 cut(s)	1350
Psp1406I	AACGTT	1 cut(s)	1877
Psp6I	CCWGG	2 cut(s)	807, 1087
PspFI	CCCAGC	1 cut(s)	779
PspGI	CCWGG	2 cut(s)	807, 1087
PspN4I	GGNNCC	5 cut(s)	331, 1123, 1317, 1689, 2056
PspPI	GGNCC	2 cut(s)	805, 819
PstI	CTGCAG	2 cut(s)	583, 1720
PstNI	CAGNNNCTG	1 cut(s)	1724
PsuI	RGATCY	3 cut(s)	845, 1121, 1813
PvuII	CAGCTG	2 cut(s)	783, 802
RsaI	GTAC	3 cut(s)	419, 510, 1475
RsaNI	GTAC	3 cut(s)	418, 509, 1474
RseI	CAYNNNNRTG	5 cut(s)	1052, 1247, 1484, 1515, 1682
SacI	GAGCTC	1 cut(s)	1350
SaqAI	TTAA	5 cut(s)	204, 656, 1293, 1310, 1644
Sau3AI	GATC	8 cut(s)	133, 845, 1121, 1420, 1624, 1813, 2046, 2083
Sau96I	GGNCC	2 cut(s)	805, 819
SchI	GAGTC	3 cut(s)	179, 848, 1497
ScrFI	CCNGG	5 cut(s)	737, 809, 863, 864, 1089
SduI	GDGCHC	4 cut(s)	376, 500, 677, 1350
SexAI	ACCWGGT	1 cut(s)	807
SfcI	CTRYAG	4 cut(s)	190, 579, 1716, 1732
SfoI	GGCGCC	1 cut(s)	1317
Sfr274I	CTCGAG	1 cut(s)	909
SinI	GGWCC	2 cut(s)	805, 819
SlaI	CTCGAG	1 cut(s)	909
SmaI	CCCGGG	1 cut(s)	864
SmiMI	CAYNNNNRTG	5 cut(s)	1052, 1247, 1484, 1515, 1682
SmlI	CTYRAG	1 cut(s)	909
SmoI	CTYRAG	1 cut(s)	909
SnaBI	TACGTA	1 cut(s)	2162
SphI	GCATGC	1 cut(s)	433
SspDI	GGCGCC	1 cut(s)	1315
SspMI	CTAG	8 cut(s)	366, 972, 1340, 1352, 1551, 1674, 1950, 2094
SstI	GAGCTC	1 cut(s)	1350
StyD4I	CCNGG	5 cut(s)	735, 807, 861, 862, 1087
StyI	CCWWGG	4 cut(s)	234, 1351, 1362, 2087
TaaI	ACNGT	8 cut(s)	94, 312, 648, 699, 1139, 1210, 1523, 1736
TaiI	ACGT	4 cut(s)	46, 964, 1880, 2164
TaqI	TCGA	4 cut(s)	558, 910, 1134, 1150
TaqII	GACCGA	2 cut(s)	197, 1452
TauI	GCSGC	4 cut(s)	104, 121, 131, 1622
TfiI	GAWTC	5 cut(s)	1579, 1611, 1663, 1721, 1923
Tru1I	TTAA	5 cut(s)	204, 656, 1293, 1310, 1644
Tru9I	TTAA	5 cut(s)	204, 656, 1293, 1310, 1644
TscAI	CASTG	3 cut(s)	704, 1213, 1254
TseFI	GTSAC	1 cut(s)	1523
TseI	GCWGC	7 cut(s)	121, 433, 475, 578, 581, 965, 968
Tsp45I	GTSAC	1 cut(s)	1523
TspDTI	ATGAA	8 cut(s)	1070, 1212, 1505, 1523, 1592, 1643, 1701, 2104
TspGWI	ACGGA	1 cut(s)	1030
TspMI	CCCGGG	1 cut(s)	862
TspRI	CASTG	3 cut(s)	704, 1213, 1254
Van91I	CCANNNNNTGG	1 cut(s)	414
VneI	GTGCAC	1 cut(s)	673
VpaK11BI	GGWCC	2 cut(s)	805, 819
VspI	ATTAAT	1 cut(s)	1644
XagI	CCTNNNNNAGG	1 cut(s)	1086
XbaI	TCTAGA	2 cut(s)	365, 2093
XceI	RCATGY	1 cut(s)	433
XhoI	CTCGAG	1 cut(s)	909
XmaI	CCCGGG	1 cut(s)	862
XmaJI	CCTAGG	1 cut(s)	1351
XmiI	GTMKAC	2 cut(s)	1392, 1731
XmnI	GAANNNNTTC	1 cut(s)	1383
XspI	CTAG	8 cut(s)	366, 972, 1340, 1352, 1551, 1674, 1950, 2094
Zsp2I	ATGCAT	2 cut(s)	364, 1919

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.