Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015694

Physical Location & Seq

Genomic Coordinates Reverse (-)

61053123 .. 61055796

Gene Structure 2674 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ59628

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGTTCCCTCACGTCTATTATTCCTTTCTCCCATTTTGTTACTGATCATAATCACTAGTACCACCGATCAAGCGGCCGCCCTTGCTCAGCCGCAGCCAGCTGCTGATCATCTGCTAAGCCACTTCTGTTCAAACCACAAAGGTAACTACACCACGACGGGTGCCTATCGCACAAACCTTAACCACCTTCTCTCATCCCTTCCCTTCAAGGGTAGCGGCCACGGCTTTTATAGTTCTTCATATGGCCGAAACACTACATCCGGCGCAATATATGCAATCGGACTATGTAAAGGAGACATTGGAACCACGCGCCACTGCCTTCATTGCCTCAATACCTCTAGAAGTGCTCTCATGGAGCTTTGTGCCAATCAGAAGGAAGCTATTGTTTGGTACGACAACTGCATGCTGCGCTACTCAAACCGCTCCCTACATGGCGTCATGGACACGCTGCCTGCTTTCAATTTGTGGAGCACTCAAAGCGTACCATCATCGGAGTTTGATGTATTTTTCCGGCAGCTCAGGTGGTTACTAGAAGCCCTAAGAAACAAGGCTGCCAAAGGGGGTTCTCTTAAGTTTGCAAAAAATAACGCAACCATTCTCAACTATCGTAACGGACTGTCTTCCTTAACGGCACTTGTGCACTGCTCCCCTGATTTGTCCGAGTTACAGTGCGGCACTTGCTTACTTGGTGCTTTTGGAGAACTCCCAAAATGTTGTGATGGAAAAGAAGGTGGGCGAGTTCTTAGACCCAGCTGTAACTTCAACTATCAGCTGAACCAGGTTATTAAGGTCAATGAACCGAAAGGTTCCGTGATTCCCAACTTAGGACGTCGTGCAAGAGATGGAAGAGTCGGCATCCTTATATTATTTGCAACGGTTGTTTCCCTTGTACTAATGATCTCCATAGGCATTTACGCGAAAGTAGTGAAAACAAGGCGCCAACCTATCAATTTTCTTGAGAAAATGGATGAGCATATGGCCATGGAATCCTTGCTATTCGACTGTGGCGCCATTCGAGTTGCCACAAATAACTTTTCTGAAGCAAATAAACTTGGAGGTGATGGATATGGCACTGTTTACAGGGGTAGTCTTTCCAACGCAAAAAGCATAGCAGTGAGAAGGCTTTCGATAAACTATGTGAAAGAGTATACGGAAATTATGAAAGAGGTTTTGTTAATGGCCAAGCTTCAACATCCAAATCTAATTGAGCTCCTAGGGTGTGCCTCGGAAGAAAATTCTGAAAGGCTTCTTGTCTATGAGCTTTTCCCTAATGCAACTCTTGATCGCATCATATTTGACGGAATCAAAAGAAGACAATGGGATTGGGAGATCCGGTACAACATCATAGTGAGCATTGCACGGGGACTCCTTCACCTTCATGACAGTTACTTTGTTCATGGTGATGTCAATGCTGGTAACGTTTTGATAGATTCACAAATAAATCCCAAAATTTCAAATTTTGGCATGGCAAGATTCTTTGAGGTTGATCAAACACAAGGCAACGTTAATGGAATTCATCTGCTGAATCTGATGTCTAACTCATACATGGCTCCAGAGGCAACTGTTGGACATTCATCTGCTGAATCCGATGTCTACAGTTTCGGTGCGTTGGTCGTGGAGATAGTTAGTGGAAAGGAAATTAGTAGTCTAACTTCCGAAAAGCTAAATGAGAATGATCTTCTGAGCTATGCATGGAAGAATTGGGCAAAAGGGACAGTTAGAAATCTAATAGATCCGACGTTGTGGACTGGTTCAGGGATTGAATTAATGGAGAGATGCATCAGAATCGGATTATTCTGTATGCAGAGGACTAGAACCGATAGGCCAACCATGTCTTCTGTTATTCAGATGCTTAGTTATTCTTCCGCTATCCCTTTACCTTATAAATTTAGTCATGGTAGCTTTGGAATCATTGGAACCATGGAAAATGTGGAAGGTTTTTCTGATCCAAGGTCTAGGGCAAAGGTTCGATCCTTCATTGCAAAGATGCGGTGTGCCACTACTGCCATCATCAATAGGATACGTAGTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

677

Amino Acids

75.22

Weight (kDa)

9.09

Isoelectric Point (pI)

39.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	43 - 141	2.1e-21	Salt stress response/antifungal
Stress-antifung	PF01657	167 - 257	2.9e-06	Salt stress response/antifungal
Pkinase	PF00069	346 - 616	2.9e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	349 - 617	2.5e-34	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015694)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g25911
rosa_chinensis	RchiOBHm_Chr1g0372241 RchiOBHm_Chr1g0372291
rosa_laevigata	RLG00000026912 RLG00000026913 RLG00000026914
rosa_multiflora	Rmu_sc0001755.1_g000014 Rmu_sc0001755.1_g000017
rosa_roxburghii	Rroxscaffold_4G00285090 Rroxscaffold_4G00285120
rosa_rugosa	Rorug01G0370700
rosa_samantha	Rh1BG342500 Rh1CG356100 Rh1CG356200 Rh1DG373700 Rh1DG373900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1884
AatII	GACGTC	1 cut(s)	832
AccB1I	GGYRCC	3 cut(s)	161, 936, 1007
AccBSI	CCGCTC	1 cut(s)	423
AccI	GTMKAC	2 cut(s)	1148, 1593
AccII	CGCG	2 cut(s)	310, 917
AciI	CCGC	8 cut(s)	74, 78, 92, 216, 421, 672, 1866, 1990
AclI	AACGTT	2 cut(s)	1419, 1503
AclWI	GGATC	4 cut(s)	1324, 1727, 1940, 1965
AcoI	YGGCCR	5 cut(s)	75, 217, 244, 978, 1179
AcsI	RAATTY	5 cut(s)	1234, 1449, 1456, 1512, 1886
AcuI	CTGAAG	1 cut(s)	1059
AcyI	GRCGYC	4 cut(s)	435, 829, 937, 1008
AfaI	GTAC	5 cut(s)	61, 392, 483, 891, 1337
AfiI	CCNNNNNNNGG	2 cut(s)	209, 824
AflII	CTTAAG	1 cut(s)	569
AgsI	TTSAA	7 cut(s)	132, 208, 460, 763, 1190, 1455, 1763
AhlI	ACTAGT	1 cut(s)	56
AjiI	CACGTC	1 cut(s)	14
AjnI	CCWGG	1 cut(s)	777
AjuI	GAANNNNNNNTTGG	2 cut(s)	1819, 1851
Alw21I	GWGCWC	4 cut(s)	349, 473, 642, 1212
Alw26I	GTCTC	1 cut(s)	288
Alw44I	GTGCAC	1 cut(s)	638
AlwI	GGATC	4 cut(s)	1324, 1727, 1940, 1965
AlwNI	CAGNNNCTG	1 cut(s)	104
AoxI	GGCC	6 cut(s)	75, 217, 244, 978, 1179, 1823
ApaLI	GTGCAC	1 cut(s)	638
ApeKI	GCWGC	6 cut(s)	94, 101, 406, 448, 514, 551
ApoI	RAATTY	5 cut(s)	1234, 1449, 1456, 1512, 1886
ArsI	GACNNNNNNTTYG	2 cut(s)	1373, 1405
AseI	ATTAAT	1 cut(s)	1766
Asp700I	GAANNNNTTC	2 cut(s)	1123, 1245
AspA2I	CCTAGG	1 cut(s)	1213
AspLEI	GCGC	5 cut(s)	266, 312, 411, 939, 1010
AsuHPI	GGTGA	3 cut(s)	1070, 1364, 1412
AvrII	CCTAGG	1 cut(s)	1213
BaeGI	GKGCMC	1 cut(s)	642
BalI	TGGCCA	2 cut(s)	980, 1181
BanI	GGYRCC	3 cut(s)	161, 936, 1007
BanII	GRGCYC	1 cut(s)	1212
BarI	GAAGNNNNNNTAC	2 cut(s)	1636, 1668
BbsI	GAAGAC	3 cut(s)	612, 1318, 1827
Bbv12I	GWGCWC	4 cut(s)	349, 473, 642, 1212
BbvI	GCAGC	6 cut(s)	88, 106, 393, 435, 526, 538
BccI	CCATC	5 cut(s)	493, 713, 836, 1055, 2015
BceAI	ACGGC	2 cut(s)	238, 645
BcgI	CGANNNNNNTGC	2 cut(s)	1768, 1802
BciT130I	CCWGG	1 cut(s)	779
BciVI	GTATCC	1 cut(s)	2013
BclI	TGATCA	3 cut(s)	45, 106, 1486
BcoDI	GTCTC	1 cut(s)	288
BcuI	ACTAGT	1 cut(s)	56
BfaI	CTAG	6 cut(s)	57, 339, 530, 1214, 1812, 1956
BfmI	CTRYAG	1 cut(s)	1594
BfoI	RGCGCY	2 cut(s)	940, 1011
BfrI	CTTAAG	1 cut(s)	569
BfuI	GTATCC	1 cut(s)	2013
BlnI	CCTAGG	1 cut(s)	1213
BlpI	GCTNAGC	2 cut(s)	87, 116
Bme1390I	CCNGG	1 cut(s)	779
BmgBI	CACGTC	1 cut(s)	14
BmiI	GGNNCC	8 cut(s)	6, 163, 304, 808, 938, 1009, 1551, 1918
BmrFI	CCNGG	1 cut(s)	779
BmsI	GCATC	6 cut(s)	864, 1296, 1766, 1788, 1839, 1977
BpiI	GAAGAC	3 cut(s)	612, 1318, 1827
BpmI	CTGGAG	1 cut(s)	1536
Bpu10I	CCTNAGC	1 cut(s)	518
Bpu1102I	GCTNAGC	2 cut(s)	87, 116
BpuEI	CTTGAG	1 cut(s)	977
BsaAI	YACGTR	1 cut(s)	2024
BsaBI	GATNNNNATC	1 cut(s)	50
BsaHI	GRCGYC	4 cut(s)	435, 829, 937, 1008
BsaJI	CCNNGG	6 cut(s)	220, 981, 1213, 1224, 1920, 1949
BsaWI	WCCGGW	1 cut(s)	1332
BsaXI	ACNNNNNCTCC	4 cut(s)	1319, 1349, 1350, 1380
Bsc4I	CCNNNNNNNGG	2 cut(s)	209, 824
Bse1I	ACTGG	1 cut(s)	1753
Bse3DI	GCAATG	3 cut(s)	322, 1353, 1977
Bse8I	GATNNNNATC	1 cut(s)	50
BseBI	CCWGG	1 cut(s)	779
BseDI	CCNNGG	6 cut(s)	220, 981, 1213, 1224, 1920, 1949
BseGI	GGATG	5 cut(s)	194, 257, 855, 973, 1192
BseJI	GATNNNNATC	1 cut(s)	50
BseLI	CCNNNNNNNGG	2 cut(s)	209, 824
BseMI	GCAATG	3 cut(s)	322, 1353, 1977
BseMII	CTCAG	3 cut(s)	101, 532, 1673
BseNI	ACTGG	1 cut(s)	1753
BseSI	GKGCMC	1 cut(s)	642
BseX3I	CGGCCG	1 cut(s)	75
BseXI	GCAGC	6 cut(s)	88, 106, 393, 435, 526, 538
BseYI	CCCAGC	1 cut(s)	749
Bsh1236I	CGCG	2 cut(s)	310, 917
Bsh1285I	CGRYCG	1 cut(s)	78
BshFI	GGCC	6 cut(s)	77, 219, 246, 980, 1181, 1825
BshNI	GGYRCC	3 cut(s)	161, 936, 1007
BsiEI	CGRYCG	1 cut(s)	78
BsiHKAI	GWGCWC	4 cut(s)	349, 473, 642, 1212
BsiSI	CCGG	3 cut(s)	261, 511, 1333
BslFI	GGGAC	2 cut(s)	1377, 1726
BslI	CCNNNNNNNGG	2 cut(s)	209, 824
BsmAI	GTCTC	1 cut(s)	288
BsmFI	GGGAC	2 cut(s)	1377, 1726
BsnI	GGCC	6 cut(s)	77, 219, 246, 980, 1181, 1825
Bsp1286I	GDGCHC	4 cut(s)	349, 473, 642, 1212
Bsp1720I	GCTNAGC	2 cut(s)	87, 116
Bsp19I	CCATGG	2 cut(s)	981, 1920
BspACI	CCGC	8 cut(s)	74, 78, 92, 216, 421, 672, 1866, 1990
BspANI	GGCC	6 cut(s)	77, 219, 246, 980, 1181, 1825
BspCNI	CTCAG	3 cut(s)	100, 531, 1674
BspFNI	CGCG	2 cut(s)	310, 917
BspHI	TCATGA	1 cut(s)	1378
BspLI	GGNNCC	8 cut(s)	6, 163, 304, 808, 938, 1009, 1551, 1918
BspPI	GGATC	4 cut(s)	1324, 1727, 1940, 1965
BspT107I	GGYRCC	3 cut(s)	161, 936, 1007
BspTI	CTTAAG	1 cut(s)	569
BsrBI	CCGCTC	1 cut(s)	423
BsrDI	GCAATG	3 cut(s)	322, 1353, 1977
BsrI	ACTGG	1 cut(s)	1753
BssECI	CCNNGG	6 cut(s)	220, 981, 1213, 1224, 1920, 1949
BssNAI	GTATAC	1 cut(s)	1149
BssNI	GRCGYC	4 cut(s)	435, 829, 937, 1008
BssT1I	CCWWGG	4 cut(s)	981, 1213, 1920, 1949
Bst1107I	GTATAC	1 cut(s)	1149
Bst2UI	CCWGG	1 cut(s)	779
Bst4CI	ACNGT	9 cut(s)	618, 669, 877, 1004, 1075, 1385, 1564, 1598, 1717
Bst6I	CTCTTC	1 cut(s)	841
BstACI	GRCGYC	4 cut(s)	435, 829, 937, 1008
BstAFI	CTTAAG	1 cut(s)	569
BstAPI	GCANNNNNTGC	1 cut(s)	272
BstBAI	YACGTR	1 cut(s)	2024
BstC8I	GCNNGC	3 cut(s)	99, 404, 453
BstDEI	CTNAG	8 cut(s)	87, 116, 518, 539, 743, 823, 1682, 1853
BstDSI	CCRYGG	3 cut(s)	220, 981, 1920
BstF5I	GGATG	5 cut(s)	194, 257, 855, 973, 1192
BstFNI	CGCG	2 cut(s)	310, 917
BstH2I	RGCGCY	2 cut(s)	940, 1011
BstHHI	GCGC	5 cut(s)	266, 312, 411, 939, 1010
BstMAI	GTCTC	1 cut(s)	288
BstMCI	CGRYCG	1 cut(s)	78
BstMWI	GCNNNNNNNGC	9 cut(s)	83, 222, 272, 324, 408, 477, 678, 1556, 2003
BstNI	CCWGG	1 cut(s)	779
BstNSI	RCATGY	1 cut(s)	406
BstSCI	CCNGG	1 cut(s)	777
BstSFI	CTRYAG	1 cut(s)	1594
BstSLI	GKGCMC	1 cut(s)	642
BstSNI	TACGTA	1 cut(s)	2024
BstUI	CGCG	2 cut(s)	310, 917
BstV1I	GCAGC	6 cut(s)	88, 106, 393, 435, 526, 538
BstV2I	GAAGAC	3 cut(s)	612, 1318, 1827
BstX2I	RGATCY	2 cut(s)	1329, 1732
BstYI	RGATCY	2 cut(s)	1329, 1732
BstZ17I	GTATAC	1 cut(s)	1149
BstZI	CGGCCG	1 cut(s)	75
BsuI	GTATCC	1 cut(s)	2013
BsuRI	GGCC	6 cut(s)	77, 219, 246, 980, 1181, 1825
BtgI	CCRYGG	3 cut(s)	220, 981, 1920
BtrI	CACGTC	1 cut(s)	14
BtsCI	GGATG	5 cut(s)	194, 257, 855, 973, 1192
BtsI	GCAGTG	3 cut(s)	313, 640, 1119
BtsIMutI	CAGTG	5 cut(s)	313, 640, 674, 1071, 1119
Cac8I	GCNNGC	3 cut(s)	99, 404, 453
CaiI	CAGNNNCTG	1 cut(s)	104
CciI	TCATGA	1 cut(s)	1378
CciNI	GCGGCCGC	1 cut(s)	75
CfoI	GCGC	5 cut(s)	266, 312, 411, 939, 1010
CseI	GACGC	1 cut(s)	424
CsiI	ACCWGGT	1 cut(s)	777
Csp6I	GTAC	5 cut(s)	60, 391, 482, 890, 1336
CviQI	GTAC	5 cut(s)	60, 391, 482, 890, 1336
DdeI	CTNAG	8 cut(s)	87, 116, 518, 539, 743, 823, 1682, 1853
DinI	GGCGCC	2 cut(s)	938, 1009
EaeI	YGGCCR	5 cut(s)	75, 217, 244, 978, 1179
EagI	CGGCCG	1 cut(s)	75
Eam1104I	CTCTTC	1 cut(s)	841
EarI	CTCTTC	1 cut(s)	841
Ecl136II	GAGCTC	1 cut(s)	1210
EclXI	CGGCCG	1 cut(s)	75
Eco105I	TACGTA	1 cut(s)	2024
Eco130I	CCWWGG	4 cut(s)	981, 1213, 1920, 1949
Eco24I	GRGCYC	1 cut(s)	1212
Eco52I	CGGCCG	1 cut(s)	75
Eco53kI	GAGCTC	1 cut(s)	1210
Eco57I	CTGAAG	1 cut(s)	1059
EcoICRI	GAGCTC	1 cut(s)	1210
EcoRI	GAATTC	1 cut(s)	1512
EcoRII	CCWGG	1 cut(s)	777
EcoT14I	CCWWGG	4 cut(s)	981, 1213, 1920, 1949
EcoT22I	ATGCAT	2 cut(s)	1693, 1781
EcoT38I	GRGCYC	1 cut(s)	1212
EgeI	GGCGCC	2 cut(s)	938, 1009
EheI	GGCGCC	2 cut(s)	938, 1009
ErhI	CCWWGG	4 cut(s)	981, 1213, 1920, 1949
FaqI	GGGAC	2 cut(s)	1377, 1726
FauNDI	CATATG	2 cut(s)	241, 975
FbaI	TGATCA	3 cut(s)	45, 106, 1486
FblI	GTMKAC	2 cut(s)	1148, 1593
FokI	GGATG	5 cut(s)	181, 244, 842, 980, 1179
FriOI	GRGCYC	1 cut(s)	1212
FspBI	CTAG	6 cut(s)	57, 339, 530, 1214, 1812, 1956
GlaI	GCGC	5 cut(s)	265, 311, 410, 938, 1009
GsaI	CCCAGC	1 cut(s)	753
GsuI	CTGGAG	1 cut(s)	1536
HaeII	RGCGCY	2 cut(s)	940, 1011
HaeIII	GGCC	6 cut(s)	77, 219, 246, 980, 1181, 1825
HapII	CCGG	3 cut(s)	261, 511, 1333
HgaI	GACGC	1 cut(s)	424
HhaI	GCGC	5 cut(s)	266, 312, 411, 939, 1010
Hin1I	GRCGYC	4 cut(s)	435, 829, 937, 1008
Hin6I	GCGC	5 cut(s)	264, 310, 409, 937, 1008
HinP1I	GCGC	5 cut(s)	264, 310, 409, 937, 1008
HindIII	AAGCTT	1 cut(s)	1184
HpaII	CCGG	3 cut(s)	261, 511, 1333
HphI	GGTGA	3 cut(s)	1070, 1364, 1412
Hpy166II	GTNNAC	5 cut(s)	640, 1078, 1149, 1594, 1746
Hpy188III	TCNNGA	5 cut(s)	339, 956, 1280, 1379, 1553
Hpy8I	GTNNAC	5 cut(s)	640, 1078, 1149, 1594, 1746
Hpy99I	CGWCG	3 cut(s)	160, 834, 1741
HpyCH4III	ACNGT	9 cut(s)	618, 669, 877, 1004, 1075, 1385, 1564, 1598, 1717
HpyCH4IV	ACGT	6 cut(s)	13, 829, 1419, 1503, 1739, 2023
HpyF10VI	GCNNNNNNNGC	9 cut(s)	83, 222, 272, 324, 408, 477, 678, 1556, 2003
HpyF3I	CTNAG	8 cut(s)	87, 116, 518, 539, 743, 823, 1682, 1853
HpySE526I	ACGT	6 cut(s)	13, 829, 1419, 1503, 1739, 2023
Hsp92I	GRCGYC	4 cut(s)	435, 829, 937, 1008
HspAI	GCGC	5 cut(s)	264, 310, 409, 937, 1008
KasI	GGCGCC	2 cut(s)	936, 1007
Ksp22I	TGATCA	3 cut(s)	45, 106, 1486
LmnI	GCTCC	6 cut(s)	355, 428, 468, 650, 1215, 1555
Lsp1109I	GCAGC	6 cut(s)	88, 106, 393, 435, 526, 538
LweI	GCATC	6 cut(s)	864, 1296, 1766, 1788, 1839, 1977
MabI	ACCWGGT	1 cut(s)	777
MaeI	CTAG	6 cut(s)	57, 339, 530, 1214, 1812, 1956
MaeII	ACGT	6 cut(s)	13, 829, 1419, 1503, 1739, 2023
MaeIII	GTNAC	8 cut(s)	39, 143, 525, 608, 663, 755, 1385, 1415
MbiI	CCGCTC	1 cut(s)	423
MboII	GAAGA	9 cut(s)	228, 612, 858, 1241, 1323, 1670, 1708, 1827, 1854
MflI	RGATCY	2 cut(s)	1329, 1732
MhlI	GDGCHC	4 cut(s)	349, 473, 642, 1212
MlsI	TGGCCA	2 cut(s)	980, 1181
MluNI	TGGCCA	2 cut(s)	980, 1181
Mly113I	GGCGCC	2 cut(s)	937, 1008
MlyI	GAGTC	2 cut(s)	858, 1359
MmeI	TCCRAC	3 cut(s)	1119, 1546, 1760
MnlI	CCTC	9 cut(s)	19, 338, 346, 1049, 1159, 1234, 1474, 1549, 1800
Mox20I	TGGCCA	2 cut(s)	980, 1181
Mph1103I	ATGCAT	2 cut(s)	1693, 1781
MroXI	GAANNNNTTC	2 cut(s)	1123, 1245
MscI	TGGCCA	2 cut(s)	980, 1181
MseI	TTAA	7 cut(s)	180, 570, 626, 786, 1175, 1506, 1766
MslI	CAYNNNNRTG	4 cut(s)	1112, 1346, 1377, 1401
Msp20I	TGGCCA	2 cut(s)	980, 1181
MspA1I	CMGCKG	3 cut(s)	101, 753, 772
MspCI	CTTAAG	1 cut(s)	569
MspI	CCGG	3 cut(s)	261, 511, 1333
MspR9I	CCNGG	1 cut(s)	779
MvaI	CCWGG	1 cut(s)	779
MvnI	CGCG	2 cut(s)	310, 917
MwoI	GCNNNNNNNGC	9 cut(s)	83, 222, 272, 324, 408, 477, 678, 1556, 2003
NarI	GGCGCC	2 cut(s)	937, 1008
NcoI	CCATGG	2 cut(s)	981, 1920
NdeI	CATATG	2 cut(s)	241, 975
NlaIV	GGNNCC	8 cut(s)	6, 163, 304, 808, 938, 1009, 1551, 1918
NotI	GCGGCCGC	1 cut(s)	75
NsiI	ATGCAT	2 cut(s)	1693, 1781
NspI	RCATGY	1 cut(s)	406
PaeI	GCATGC	1 cut(s)	406
PagI	TCATGA	1 cut(s)	1378
PdmI	GAANNNNTTC	2 cut(s)	1123, 1245
PfeI	GAWTC	9 cut(s)	814, 986, 1302, 1430, 1473, 1525, 1583, 1785, 1908
PleI	GAGTC	2 cut(s)	857, 1359
PluTI	GGCGCC	2 cut(s)	940, 1011
PpsI	GAGTC	2 cut(s)	857, 1359
Ppu21I	YACGTR	1 cut(s)	2024
PshBI	ATTAAT	1 cut(s)	1766
PsiI	TTATAA	1 cut(s)	1884
Psp124BI	GAGCTC	1 cut(s)	1212
Psp1406I	AACGTT	2 cut(s)	1419, 1503
Psp6I	CCWGG	1 cut(s)	777
PspFI	CCCAGC	1 cut(s)	749
PspGI	CCWGG	1 cut(s)	777
PspN4I	GGNNCC	8 cut(s)	6, 163, 304, 808, 938, 1009, 1551, 1918
PstNI	CAGNNNCTG	1 cut(s)	104
PsuI	RGATCY	2 cut(s)	1329, 1732
PvuII	CAGCTG	3 cut(s)	101, 753, 772
RsaI	GTAC	5 cut(s)	61, 392, 483, 891, 1337
RsaNI	GTAC	5 cut(s)	60, 391, 482, 890, 1336
RseI	CAYNNNNRTG	4 cut(s)	1112, 1346, 1377, 1401
SacI	GAGCTC	1 cut(s)	1212
SaqAI	TTAA	7 cut(s)	180, 570, 626, 786, 1175, 1506, 1766
SchI	GAGTC	2 cut(s)	858, 1359
ScrFI	CCNGG	1 cut(s)	779
SduI	GDGCHC	4 cut(s)	349, 473, 642, 1212
SexAI	ACCWGGT	1 cut(s)	777
SfaNI	GCATC	6 cut(s)	864, 1296, 1766, 1788, 1839, 1977
SfcI	CTRYAG	1 cut(s)	1594
SfoI	GGCGCC	2 cut(s)	938, 1009
SmiMI	CAYNNNNRTG	4 cut(s)	1112, 1346, 1377, 1401
SmlI	CTYRAG	2 cut(s)	569, 956
SmoI	CTYRAG	2 cut(s)	569, 956
SnaBI	TACGTA	1 cut(s)	2024
SpeI	ACTAGT	1 cut(s)	56
SphI	GCATGC	1 cut(s)	406
SsiI	CCGC	8 cut(s)	74, 78, 92, 216, 421, 672, 1866, 1990
SspDI	GGCGCC	2 cut(s)	936, 1007
SspMI	CTAG	6 cut(s)	57, 339, 530, 1214, 1812, 1956
SstI	GAGCTC	1 cut(s)	1212
StyD4I	CCNGG	1 cut(s)	777
StyI	CCWWGG	4 cut(s)	981, 1213, 1920, 1949
TaaI	ACNGT	9 cut(s)	618, 669, 877, 1004, 1075, 1385, 1564, 1598, 1717
TaiI	ACGT	6 cut(s)	16, 832, 1422, 1506, 1742, 2026
TaqI	TCGA	4 cut(s)	999, 1015, 1127, 1969
TatI	WGTACW	1 cut(s)	889
TauI	GCSGC	5 cut(s)	77, 80, 94, 219, 675
TfiI	GAWTC	9 cut(s)	814, 986, 1302, 1430, 1473, 1525, 1583, 1785, 1908
Tru1I	TTAA	7 cut(s)	180, 570, 626, 786, 1175, 1506, 1766
Tru9I	TTAA	7 cut(s)	180, 570, 626, 786, 1175, 1506, 1766
TscAI	CASTG	5 cut(s)	320, 647, 674, 1078, 1119
TseI	GCWGC	6 cut(s)	94, 101, 406, 448, 514, 551
TspDTI	ATGAA	9 cut(s)	228, 311, 810, 1175, 1367, 1385, 1505, 1563, 1966
TspGWI	ACGGA	4 cut(s)	627, 799, 1166, 1314
TspRI	CASTG	5 cut(s)	320, 647, 674, 1078, 1119
Vha464I	CTTAAG	1 cut(s)	569
VneI	GTGCAC	1 cut(s)	638
VspI	ATTAAT	1 cut(s)	1766
XapI	RAATTY	5 cut(s)	1234, 1449, 1456, 1512, 1886
XbaI	TCTAGA	1 cut(s)	338
XceI	RCATGY	1 cut(s)	406
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1927
XmaJI	CCTAGG	1 cut(s)	1213
XmiI	GTMKAC	2 cut(s)	1148, 1593
XmnI	GAANNNNTTC	2 cut(s)	1123, 1245
XspI	CTAG	6 cut(s)	57, 339, 530, 1214, 1812, 1956
ZraI	GACGTC	1 cut(s)	830
Zsp2I	ATGCAT	2 cut(s)	1693, 1781

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.