Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0015694

Physical Location & Seq

Genomic Coordinates Forward (+)

6923905 .. 6927326

Gene Structure 3422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026912

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGGTTCCCTCACGTCTATTCCTTTCTCCCATTTTGTTACTGATCATAATCACTAGTACCACCGATCAAGCGGCCGCCCTTGCTCAGCCGCAGCCAGCAGCTGATCATCTGATTAGCCACTTCTGTTCAAACCACAAAGGTAACTACACCACGATGGGTGCCTATCGCACAAACCTTAACCACCTTCTCTCATCCCTTCCCTTCAAGGGTAGCGGCCACGGCTTTTATAGTTCTTCATATGGCCGAAACACTACATCCGGCGCAATATATGCAATCGGACTATGTAAAGGAGACATTGGAACCAAGCGCCACTGCCTTCATTGCCTCAATTCCTCTAGAAGTGCTCTCATGGAGCTTTGTGCCAATCAGAAGGAAGCTATTGTTTGGTACGACAACTGCATGCTGCACTACTCAAACCGCTCCCTATATGGCGTCATGGACACGCTGCCTGCTTTCGATTTGTGGAGCACTCAAAGCGTACCATCATCGGAGTTTGATGTATTTTTCCAGCAGCTCAGGTGGTTACTAGAAGCCCTAAGAAACAAAGCTGCGGCAGGGGGTTCTCTTAAGTTTGCGAAAAATAACGCAACCATTCTCAACTATAGTAACGGAATGTCTTACTTAACGGCCCTTGTGCAGTGCACTCCTGATTTGTCCGAGTTACAGTGCAGCACTTGCTTACTTGGTGCTTTTGAAGAACTCCCAAAATGTTGTGATGGAAAGGAAGGTGGGCGAGTTCTTAGACCCAGCTGTAACTTCAACTATCAGCTGAACCAGGTTACTGAGGTCAATGAATTACCGAAAGGTTCCATGATTCCCAACTTAGGACGTCGTGCAAGAGATAGAAGAGTCGGCATCCTTATTCTATTTGCAATGGTTGTTTCTCTTGTACTACTGATCTCCGTAGGCATTTACGCGAAAGTAGTGAAGACAAGGCCACAACCTATCTTAGGGATGAAACATAATTTTCTTGAGAAAATGGATGAGCATATGGCCATGGAATCCTTGCTATTCGACTGTGGCGCCATTCGAGTTGCCACAAATAATTTTTCTGAAGCAAATAAACTTGGAGATGATGGATATGGCACTGTTTACAGGGGTAGTCTTTCCAACGCAAAAAGCATAGCAGTGAGAAAGCTTTCAATAAAGTATGTGAAAGAGTACATGGAAATTAAGAAAGAGGTTTTGTTAATGGCCAAGCTTCAACATCCAAATCTAATTGAGCTCCTAGGTTGTGCCTTGGAAGAAAATTCTGAAAGGCTTCTTGTCTATGAGCTTTTCCCTAATGCAACTCTTGATCGCATCATATTTGACGGAATCAAGAGCAGACAATGGGATTGGGAGATCCGGTACAACATCGTAGTGAGCATTGCACGGGGACTCCTTCACCTTCATGACCGTAACTTTGTTCATGGTGATGTCAATGCTGGTAACATTTTGATAGATGCACACATGAATCCCAAAATTTCAAATTTTGGAATGGCAAGATTCTTTGAGGTTGATCAAACACAAGGCAACGTTAATGGAATTCATCTGCTGGATCTGATGTCTAACTCCTACATGGCTCCAGAGGCAACTGTTGGACTTTCATCTGCTGAATCTGATGTCTACAGTTTCGGTGCGTTAGTCGTGGAGATAGTAAGTGGACAGGAAATTAGTAGTTTAACCGCCGAAAAGCTAAATGAGAAGGATCTTCTGAGCTATGCATGGAAGAATTGGGCAAAAGGGACAGTTAGAAGTCTAATAGATCCGACGTTGTGGACTGGTTCAGGGATTGAATTAATGGAGAGATGCATCAGAATCGGATTATTCTGTATGCAGAGGACTAGAACCGATAGGCCAACCATGTCTTCTGTTATTCAGATGCTTAGTTATTCTTCCGCTATCCCTCTACCTTATAAATTTAGTCATGGTAGCTTTAGAATCATTGGAACCATGGAAAATGTGGAAGGTGTTTCTGATCCAAGGTCTAGGGCAAAGGTTCAATCCTTCTTTGCAAAGATGCGGTGTGCCACTACTGCCATCATCAATAGGATACGTAGTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

683

Amino Acids

76.0

Weight (kDa)

8.75

Isoelectric Point (pI)

40.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	42 - 140	2.6e-20	Salt stress response/antifungal
Stress-antifung	PF01657	166 - 256	1e-08	Salt stress response/antifungal
Pkinase	PF00069	351 - 621	1.3e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	353 - 622	2.2e-34	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015694)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g25911
rosa_chinensis	RchiOBHm_Chr1g0372241 RchiOBHm_Chr1g0372291
rosa_laevigata	RLG00000026912 RLG00000026913 RLG00000026914
rosa_multiflora	Rmu_sc0001755.1_g000014 Rmu_sc0001755.1_g000017
rosa_roxburghii	Rroxscaffold_4G00285090 Rroxscaffold_4G00285120
rosa_rugosa	Rorug01G0370700
rosa_samantha	Rh1BG342500 Rh1CG356100 Rh1CG356200 Rh1DG373700 Rh1DG373900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1899
AatII	GACGTC	1 cut(s)	832
AccB1I	GGYRCC	2 cut(s)	158, 1022
AccBSI	CCGCTC	1 cut(s)	420
AccI	GTMKAC	1 cut(s)	1608
AccII	CGCG	1 cut(s)	917
AciI	CCGC	9 cut(s)	71, 75, 89, 213, 418, 551, 1668, 1881, 2005
AclI	AACGTT	1 cut(s)	1518
AclWI	GGATC	5 cut(s)	1339, 1548, 1698, 1742, 1955
AcoI	YGGCCR	5 cut(s)	72, 214, 241, 993, 1194
AcsI	RAATTY	5 cut(s)	1249, 1464, 1471, 1527, 1901
AcuI	CTGAAG	1 cut(s)	1074
AcyI	GRCGYC	3 cut(s)	432, 829, 1023
AfaI	GTAC	6 cut(s)	58, 389, 480, 891, 1163, 1352
AfiI	CCNNNNNNNGG	3 cut(s)	206, 824, 950
AflII	CTTAAG	1 cut(s)	566
AgsI	TTSAA	9 cut(s)	129, 205, 695, 760, 1143, 1205, 1470, 1778, 1985
AhlI	ACTAGT	1 cut(s)	53
AjiI	CACGTC	1 cut(s)	14
AjnI	CCWGG	1 cut(s)	774
AjuI	GAANNNNNNNTTGG	2 cut(s)	1834, 1866
Alw21I	GWGCWC	4 cut(s)	346, 470, 644, 1227
Alw26I	GTCTC	1 cut(s)	285
Alw44I	GTGCAC	1 cut(s)	640
AlwI	GGATC	5 cut(s)	1339, 1548, 1698, 1742, 1955
AlwNI	CAGNNNCTG	1 cut(s)	101
AoxI	GGCC	8 cut(s)	72, 214, 241, 627, 935, 993, 1194, 1838
ApaLI	GTGCAC	1 cut(s)	640
ApeKI	GCWGC	7 cut(s)	91, 98, 403, 445, 511, 548, 669
ApoI	RAATTY	5 cut(s)	1249, 1464, 1471, 1527, 1901
ArsI	GACNNNNNNTTYG	2 cut(s)	1388, 1420
AseI	ATTAAT	1 cut(s)	1781
Asp700I	GAANNNNTTC	2 cut(s)	1138, 1260
AspA2I	CCTAGG	1 cut(s)	1228
AspLEI	GCGC	3 cut(s)	263, 309, 1025
AspS9I	GGNCC	1 cut(s)	628
AsuHPI	GGTGA	2 cut(s)	1379, 1427
AvrII	CCTAGG	1 cut(s)	1228
BaeGI	GKGCMC	1 cut(s)	644
BalI	TGGCCA	2 cut(s)	995, 1196
BanI	GGYRCC	2 cut(s)	158, 1022
BanII	GRGCYC	1 cut(s)	1227
BbsI	GAAGAC	2 cut(s)	935, 1842
Bbv12I	GWGCWC	4 cut(s)	346, 470, 644, 1227
BbvI	GCAGC	7 cut(s)	103, 110, 390, 432, 523, 535, 681
BccI	CCATC	5 cut(s)	148, 490, 710, 1070, 2030
BceAI	ACGGC	2 cut(s)	235, 642
BcgI	CGANNNNNNTGC	2 cut(s)	1783, 1817
BciT130I	CCWGG	1 cut(s)	776
BciVI	GTATCC	1 cut(s)	2028
BclI	TGATCA	3 cut(s)	42, 103, 1501
BcoDI	GTCTC	1 cut(s)	285
BcuI	ACTAGT	1 cut(s)	53
BfaI	CTAG	6 cut(s)	54, 336, 527, 1229, 1827, 1971
BfmI	CTRYAG	2 cut(s)	601, 1609
BfoI	RGCGCY	2 cut(s)	310, 1026
BfrI	CTTAAG	1 cut(s)	566
BfuI	GTATCC	1 cut(s)	2028
BlnI	CCTAGG	1 cut(s)	1228
BlpI	GCTNAGC	1 cut(s)	84
Bme1390I	CCNGG	1 cut(s)	776
BmgBI	CACGTC	1 cut(s)	14
BmgT120I	GGNCC	1 cut(s)	628
BmiI	GGNNCC	7 cut(s)	6, 160, 301, 808, 1024, 1566, 1933
BmrFI	CCNGG	1 cut(s)	776
BmsI	GCATC	7 cut(s)	864, 1311, 1435, 1781, 1803, 1854, 1992
BpiI	GAAGAC	2 cut(s)	935, 1842
BpmI	CTGGAG	1 cut(s)	1551
Bpu10I	CCTNAGC	1 cut(s)	515
Bpu1102I	GCTNAGC	1 cut(s)	84
BpuEI	CTTGAG	1 cut(s)	992
BsaAI	YACGTR	1 cut(s)	2039
BsaBI	GATNNNNATC	1 cut(s)	47
BsaHI	GRCGYC	3 cut(s)	432, 829, 1023
BsaJI	CCNNGG	6 cut(s)	217, 996, 1228, 1239, 1935, 1964
BsaWI	WCCGGW	1 cut(s)	1347
BsaXI	ACNNNNNCTCC	4 cut(s)	1334, 1364, 1365, 1395
Bsc4I	CCNNNNNNNGG	3 cut(s)	206, 824, 950
Bse1I	ACTGG	1 cut(s)	1768
Bse3DI	GCAATG	3 cut(s)	319, 879, 1368
Bse8I	GATNNNNATC	1 cut(s)	47
BseBI	CCWGG	1 cut(s)	776
BseDI	CCNNGG	6 cut(s)	217, 996, 1228, 1239, 1935, 1964
BseGI	GGATG	6 cut(s)	191, 254, 855, 960, 988, 1207
BseJI	GATNNNNATC	1 cut(s)	47
BseLI	CCNNNNNNNGG	3 cut(s)	206, 824, 950
BseMI	GCAATG	3 cut(s)	319, 879, 1368
BseMII	CTCAG	4 cut(s)	98, 529, 774, 1688
BseNI	ACTGG	1 cut(s)	1768
BseSI	GKGCMC	1 cut(s)	644
BseX3I	CGGCCG	1 cut(s)	72
BseXI	GCAGC	7 cut(s)	103, 110, 390, 432, 523, 535, 681
BseYI	CCCAGC	1 cut(s)	746
BsgI	GTGCAG	3 cut(s)	389, 656, 688
Bsh1236I	CGCG	1 cut(s)	917
Bsh1285I	CGRYCG	1 cut(s)	75
BshFI	GGCC	8 cut(s)	74, 216, 243, 629, 937, 995, 1196, 1840
BshNI	GGYRCC	2 cut(s)	158, 1022
BsiEI	CGRYCG	1 cut(s)	75
BsiHKAI	GWGCWC	4 cut(s)	346, 470, 644, 1227
BsiSI	CCGG	2 cut(s)	258, 1348
BslFI	GGGAC	2 cut(s)	1392, 1741
BslI	CCNNNNNNNGG	3 cut(s)	206, 824, 950
BsmAI	GTCTC	1 cut(s)	285
BsmFI	GGGAC	2 cut(s)	1392, 1741
BsnI	GGCC	8 cut(s)	74, 216, 243, 629, 937, 995, 1196, 1840
Bsp1286I	GDGCHC	4 cut(s)	346, 470, 644, 1227
Bsp1720I	GCTNAGC	1 cut(s)	84
Bsp19I	CCATGG	2 cut(s)	996, 1935
BspACI	CCGC	9 cut(s)	71, 75, 89, 213, 418, 551, 1668, 1881, 2005
BspANI	GGCC	8 cut(s)	74, 216, 243, 629, 937, 995, 1196, 1840
BspCNI	CTCAG	4 cut(s)	97, 528, 775, 1689
BspFNI	CGCG	1 cut(s)	917
BspHI	TCATGA	1 cut(s)	1393
BspLI	GGNNCC	7 cut(s)	6, 160, 301, 808, 1024, 1566, 1933
BspPI	GGATC	5 cut(s)	1339, 1548, 1698, 1742, 1955
BspT107I	GGYRCC	2 cut(s)	158, 1022
BspTI	CTTAAG	1 cut(s)	566
BsrBI	CCGCTC	1 cut(s)	420
BsrDI	GCAATG	3 cut(s)	319, 879, 1368
BsrI	ACTGG	1 cut(s)	1768
BssECI	CCNNGG	6 cut(s)	217, 996, 1228, 1239, 1935, 1964
BssNI	GRCGYC	3 cut(s)	432, 829, 1023
BssT1I	CCWWGG	5 cut(s)	996, 1228, 1239, 1935, 1964
Bst2UI	CCWGG	1 cut(s)	776
Bst4CI	ACNGT	7 cut(s)	666, 1019, 1090, 1400, 1579, 1613, 1732
Bst6I	CTCTTC	1 cut(s)	841
BstACI	GRCGYC	3 cut(s)	432, 829, 1023
BstAFI	CTTAAG	1 cut(s)	566
BstAPI	GCANNNNNTGC	2 cut(s)	269, 675
BstBAI	YACGTR	1 cut(s)	2039
BstC8I	GCNNGC	3 cut(s)	96, 401, 450
BstDEI	CTNAG	9 cut(s)	84, 515, 536, 740, 783, 823, 949, 1697, 1868
BstDSI	CCRYGG	3 cut(s)	217, 996, 1935
BstENI	CCTNNNNNAGG	1 cut(s)	948
BstF5I	GGATG	6 cut(s)	191, 254, 855, 960, 988, 1207
BstFNI	CGCG	1 cut(s)	917
BstH2I	RGCGCY	2 cut(s)	310, 1026
BstHHI	GCGC	3 cut(s)	263, 309, 1025
BstMAI	GTCTC	1 cut(s)	285
BstMCI	CGRYCG	1 cut(s)	75
BstMWI	GCNNNNNNNGC	8 cut(s)	80, 219, 269, 321, 474, 675, 1571, 2018
BstNI	CCWGG	1 cut(s)	776
BstNSI	RCATGY	1 cut(s)	403
BstSCI	CCNGG	1 cut(s)	774
BstSFI	CTRYAG	2 cut(s)	601, 1609
BstSLI	GKGCMC	1 cut(s)	644
BstSNI	TACGTA	1 cut(s)	2039
BstUI	CGCG	1 cut(s)	917
BstV1I	GCAGC	7 cut(s)	103, 110, 390, 432, 523, 535, 681
BstV2I	GAAGAC	2 cut(s)	935, 1842
BstX2I	RGATCY	4 cut(s)	1344, 1540, 1690, 1747
BstYI	RGATCY	4 cut(s)	1344, 1540, 1690, 1747
BstZI	CGGCCG	1 cut(s)	72
BsuI	GTATCC	1 cut(s)	2028
BsuRI	GGCC	8 cut(s)	74, 216, 243, 629, 937, 995, 1196, 1840
BtgI	CCRYGG	3 cut(s)	217, 996, 1935
BtrI	CACGTC	1 cut(s)	14
BtsCI	GGATG	6 cut(s)	191, 254, 855, 960, 988, 1207
BtsI	GCAGTG	3 cut(s)	310, 644, 1134
BtsIMutI	CAGTG	5 cut(s)	310, 644, 671, 1086, 1134
Cac8I	GCNNGC	3 cut(s)	96, 401, 450
CaiI	CAGNNNCTG	1 cut(s)	101
CciI	TCATGA	1 cut(s)	1393
CciNI	GCGGCCGC	1 cut(s)	72
CfoI	GCGC	3 cut(s)	263, 309, 1025
Cfr13I	GGNCC	1 cut(s)	628
CseI	GACGC	1 cut(s)	421
CsiI	ACCWGGT	1 cut(s)	774
Csp6I	GTAC	6 cut(s)	57, 388, 479, 890, 1162, 1351
CviQI	GTAC	6 cut(s)	57, 388, 479, 890, 1162, 1351
DdeI	CTNAG	9 cut(s)	84, 515, 536, 740, 783, 823, 949, 1697, 1868
DinI	GGCGCC	1 cut(s)	1024
EaeI	YGGCCR	5 cut(s)	72, 214, 241, 993, 1194
EagI	CGGCCG	1 cut(s)	72
Eam1104I	CTCTTC	1 cut(s)	841
EarI	CTCTTC	1 cut(s)	841
Ecl136II	GAGCTC	1 cut(s)	1225
EclXI	CGGCCG	1 cut(s)	72
Eco105I	TACGTA	1 cut(s)	2039
Eco130I	CCWWGG	5 cut(s)	996, 1228, 1239, 1935, 1964
Eco24I	GRGCYC	1 cut(s)	1227
Eco52I	CGGCCG	1 cut(s)	72
Eco53kI	GAGCTC	1 cut(s)	1225
Eco57I	CTGAAG	1 cut(s)	1074
EcoICRI	GAGCTC	1 cut(s)	1225
EcoNI	CCTNNNNNAGG	1 cut(s)	948
EcoRI	GAATTC	1 cut(s)	1527
EcoRII	CCWGG	1 cut(s)	774
EcoT14I	CCWWGG	5 cut(s)	996, 1228, 1239, 1935, 1964
EcoT22I	ATGCAT	2 cut(s)	1708, 1796
EcoT38I	GRGCYC	1 cut(s)	1227
EgeI	GGCGCC	1 cut(s)	1024
EheI	GGCGCC	1 cut(s)	1024
ErhI	CCWWGG	5 cut(s)	996, 1228, 1239, 1935, 1964
FaqI	GGGAC	2 cut(s)	1392, 1741
FauNDI	CATATG	2 cut(s)	238, 990
FbaI	TGATCA	3 cut(s)	42, 103, 1501
FblI	GTMKAC	1 cut(s)	1608
FokI	GGATG	6 cut(s)	178, 241, 842, 967, 995, 1194
FriOI	GRGCYC	1 cut(s)	1227
FspBI	CTAG	6 cut(s)	54, 336, 527, 1229, 1827, 1971
GlaI	GCGC	3 cut(s)	262, 308, 1024
GsaI	CCCAGC	1 cut(s)	750
GsuI	CTGGAG	1 cut(s)	1551
HaeII	RGCGCY	2 cut(s)	310, 1026
HaeIII	GGCC	8 cut(s)	74, 216, 243, 629, 937, 995, 1196, 1840
HapII	CCGG	2 cut(s)	258, 1348
HgaI	GACGC	1 cut(s)	421
HhaI	GCGC	3 cut(s)	263, 309, 1025
Hin1I	GRCGYC	3 cut(s)	432, 829, 1023
Hin6I	GCGC	3 cut(s)	261, 307, 1023
HinP1I	GCGC	3 cut(s)	261, 307, 1023
HindIII	AAGCTT	2 cut(s)	1136, 1199
HpaII	CCGG	2 cut(s)	258, 1348
HphI	GGTGA	2 cut(s)	1379, 1427
Hpy166II	GTNNAC	5 cut(s)	642, 1093, 1609, 1646, 1761
Hpy188III	TCNNGA	7 cut(s)	336, 647, 971, 1295, 1321, 1394, 1568
Hpy8I	GTNNAC	5 cut(s)	642, 1093, 1609, 1646, 1761
Hpy99I	CGWCG	2 cut(s)	834, 1756
HpyCH4III	ACNGT	7 cut(s)	666, 1019, 1090, 1400, 1579, 1613, 1732
HpyCH4IV	ACGT	5 cut(s)	13, 829, 1518, 1754, 2038
HpyF10VI	GCNNNNNNNGC	8 cut(s)	80, 219, 269, 321, 474, 675, 1571, 2018
HpyF3I	CTNAG	9 cut(s)	84, 515, 536, 740, 783, 823, 949, 1697, 1868
HpySE526I	ACGT	5 cut(s)	13, 829, 1518, 1754, 2038
Hsp92I	GRCGYC	3 cut(s)	432, 829, 1023
HspAI	GCGC	3 cut(s)	261, 307, 1023
KasI	GGCGCC	1 cut(s)	1022
Ksp22I	TGATCA	3 cut(s)	42, 103, 1501
LmnI	GCTCC	5 cut(s)	352, 425, 465, 1230, 1570
Lsp1109I	GCAGC	7 cut(s)	103, 110, 390, 432, 523, 535, 681
LweI	GCATC	7 cut(s)	864, 1311, 1435, 1781, 1803, 1854, 1992
MabI	ACCWGGT	1 cut(s)	774
MaeI	CTAG	6 cut(s)	54, 336, 527, 1229, 1827, 1971
MaeII	ACGT	5 cut(s)	13, 829, 1518, 1754, 2038
MaeIII	GTNAC	9 cut(s)	36, 140, 522, 605, 660, 752, 778, 1400, 1430
MbiI	CCGCTC	1 cut(s)	420
MboII	GAAGA	9 cut(s)	225, 707, 858, 940, 1256, 1685, 1723, 1842, 1869
MflI	RGATCY	4 cut(s)	1344, 1540, 1690, 1747
MhlI	GDGCHC	4 cut(s)	346, 470, 644, 1227
MlsI	TGGCCA	2 cut(s)	995, 1196
MluNI	TGGCCA	2 cut(s)	995, 1196
Mly113I	GGCGCC	1 cut(s)	1023
MlyI	GAGTC	2 cut(s)	858, 1374
MmeI	TCCRAC	3 cut(s)	1134, 1561, 1775
MnlI	CCTC	9 cut(s)	19, 335, 343, 778, 1174, 1489, 1564, 1815, 1899
Mox20I	TGGCCA	2 cut(s)	995, 1196
Mph1103I	ATGCAT	2 cut(s)	1708, 1796
MroXI	GAANNNNTTC	2 cut(s)	1138, 1260
MscI	TGGCCA	2 cut(s)	995, 1196
MseI	TTAA	8 cut(s)	177, 567, 623, 1173, 1190, 1521, 1664, 1781
MslI	CAYNNNNRTG	5 cut(s)	152, 1127, 1361, 1392, 1416
Msp20I	TGGCCA	2 cut(s)	995, 1196
MspA1I	CMGCKG	3 cut(s)	101, 750, 769
MspCI	CTTAAG	1 cut(s)	566
MspI	CCGG	2 cut(s)	258, 1348
MspR9I	CCNGG	1 cut(s)	776
MvaI	CCWGG	1 cut(s)	776
MvnI	CGCG	1 cut(s)	917
MwoI	GCNNNNNNNGC	8 cut(s)	80, 219, 269, 321, 474, 675, 1571, 2018
NarI	GGCGCC	1 cut(s)	1023
NcoI	CCATGG	2 cut(s)	996, 1935
NdeI	CATATG	2 cut(s)	238, 990
NlaIV	GGNNCC	7 cut(s)	6, 160, 301, 808, 1024, 1566, 1933
NotI	GCGGCCGC	1 cut(s)	72
NsiI	ATGCAT	2 cut(s)	1708, 1796
NspI	RCATGY	1 cut(s)	403
PaeI	GCATGC	1 cut(s)	403
PagI	TCATGA	1 cut(s)	1393
PdmI	GAANNNNTTC	2 cut(s)	1138, 1260
PfeI	GAWTC	8 cut(s)	814, 1001, 1317, 1456, 1488, 1598, 1800, 1923
PleI	GAGTC	2 cut(s)	857, 1374
PluTI	GGCGCC	1 cut(s)	1026
PpsI	GAGTC	2 cut(s)	857, 1374
Ppu21I	YACGTR	1 cut(s)	2039
PshBI	ATTAAT	1 cut(s)	1781
PsiI	TTATAA	1 cut(s)	1899
Psp124BI	GAGCTC	1 cut(s)	1227
Psp1406I	AACGTT	1 cut(s)	1518
Psp6I	CCWGG	1 cut(s)	774
PspFI	CCCAGC	1 cut(s)	746
PspGI	CCWGG	1 cut(s)	774
PspN4I	GGNNCC	7 cut(s)	6, 160, 301, 808, 1024, 1566, 1933
PspPI	GGNCC	1 cut(s)	628
PstNI	CAGNNNCTG	1 cut(s)	101
PsuI	RGATCY	4 cut(s)	1344, 1540, 1690, 1747
PvuII	CAGCTG	3 cut(s)	101, 750, 769
RsaI	GTAC	6 cut(s)	58, 389, 480, 891, 1163, 1352
RsaNI	GTAC	6 cut(s)	57, 388, 479, 890, 1162, 1351
RseI	CAYNNNNRTG	5 cut(s)	152, 1127, 1361, 1392, 1416
SacI	GAGCTC	1 cut(s)	1227
SaqAI	TTAA	8 cut(s)	177, 567, 623, 1173, 1190, 1521, 1664, 1781
Sau96I	GGNCC	1 cut(s)	628
SchI	GAGTC	2 cut(s)	858, 1374
ScrFI	CCNGG	1 cut(s)	776
SduI	GDGCHC	4 cut(s)	346, 470, 644, 1227
SexAI	ACCWGGT	1 cut(s)	774
SfaNI	GCATC	7 cut(s)	864, 1311, 1435, 1781, 1803, 1854, 1992
SfcI	CTRYAG	2 cut(s)	601, 1609
SfoI	GGCGCC	1 cut(s)	1024
SmiMI	CAYNNNNRTG	5 cut(s)	152, 1127, 1361, 1392, 1416
SmlI	CTYRAG	2 cut(s)	566, 971
SmoI	CTYRAG	2 cut(s)	566, 971
SnaBI	TACGTA	1 cut(s)	2039
SpeI	ACTAGT	1 cut(s)	53
SphI	GCATGC	1 cut(s)	403
SsiI	CCGC	9 cut(s)	71, 75, 89, 213, 418, 551, 1668, 1881, 2005
SspDI	GGCGCC	1 cut(s)	1022
SspMI	CTAG	6 cut(s)	54, 336, 527, 1229, 1827, 1971
SstI	GAGCTC	1 cut(s)	1227
StyD4I	CCNGG	1 cut(s)	774
StyI	CCWWGG	5 cut(s)	996, 1228, 1239, 1935, 1964
TaaI	ACNGT	7 cut(s)	666, 1019, 1090, 1400, 1579, 1613, 1732
TaiI	ACGT	5 cut(s)	16, 832, 1521, 1757, 2041
TaqI	TCGA	3 cut(s)	456, 1014, 1030
TatI	WGTACW	2 cut(s)	889, 1161
TauI	GCSGC	5 cut(s)	74, 77, 91, 216, 554
TfiI	GAWTC	8 cut(s)	814, 1001, 1317, 1456, 1488, 1598, 1800, 1923
Tru1I	TTAA	8 cut(s)	177, 567, 623, 1173, 1190, 1521, 1664, 1781
Tru9I	TTAA	8 cut(s)	177, 567, 623, 1173, 1190, 1521, 1664, 1781
TscAI	CASTG	5 cut(s)	317, 644, 671, 1093, 1134
TseI	GCWGC	7 cut(s)	91, 98, 403, 445, 511, 548, 669
TspDTI	ATGAA	9 cut(s)	225, 308, 807, 971, 1382, 1400, 1469, 1520, 1578
TspGWI	ACGGA	3 cut(s)	624, 892, 1329
TspRI	CASTG	5 cut(s)	317, 644, 671, 1093, 1134
Vha464I	CTTAAG	1 cut(s)	566
VneI	GTGCAC	1 cut(s)	640
VspI	ATTAAT	1 cut(s)	1781
XagI	CCTNNNNNAGG	1 cut(s)	948
XapI	RAATTY	5 cut(s)	1249, 1464, 1471, 1527, 1901
XbaI	TCTAGA	1 cut(s)	335
XceI	RCATGY	1 cut(s)	403
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1942
XmaJI	CCTAGG	1 cut(s)	1228
XmiI	GTMKAC	1 cut(s)	1608
XmnI	GAANNNNTTC	2 cut(s)	1138, 1260
XspI	CTAG	6 cut(s)	54, 336, 527, 1229, 1827, 1971
ZraI	GACGTC	1 cut(s)	830
Zsp2I	ATGCAT	2 cut(s)	1708, 1796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.