Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0015694

Physical Location & Seq

Genomic Coordinates Forward (+)

6959601 .. 6966399

Gene Structure 6799 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026914

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGTTTCCTCACGTCTATTCATTTCTCCCATTTTGTTACTGATCATCATCATTAGTACCAATGATCACGCGACCACCCTTGCTCAGCCGCAGCCAGCCGCTGATCTGCTCAATCACTTCTGTTCAAACGACAAAGGTAACTACACCACGACCGACTCCTATGGTACAAACCTTAACCACCTTCTCTCATCCCTTCCCTCTACCAAGGGCAACGGCTTTGGCTTTTACAATTCCTCCTATGGCGGAAATACATCATCCGTGGCAATATATGCAATCGGACTGTGTAAAGGAAATATCGAAACGACAAGCGACTGCCTTCAATGCCTCAATGCCGCTGGAAGTGCTCTCATGGAGCTCTGTCCCAATCAGAAGGAGGCCATTATTTGGTACGACAACTGCATGCTGCGCTACTCAAACCGCTCCATATATAGTGTCATGGAAACGCAGCCAACGTCTGATATGTGGAGCACACAAAGCGTACCATCATCCAAATTTGATATGTTTTTTCGCAATCTCACCATCCTACTCGAAAGATTAGGAATTGAAGCTGCAGCAGGTGGTTCTCTGAAGTTCGCGAAAGATAACGCAACCATTCTCAACTATAGTAACGGCGGACTGTCATCCTTAACGGCACTTGTAGAGTGCACTCCTGATTTGTCCAAGTTACAGTGCAGGACTTGCTTACTTGGGGCTTTTGAAGAATTCCCGGAATGTTGTGATGGAAAGGAAGGTGGGCGAGTTCTTAGACCCAGCTGCAACTTCAAGTATCAGCTGGACCAAGTTGACGCGACCAATACCACAATTCCCGTGTCAGGATCTCCAAGTGAAAGCCCTACGTTGGCTCCAAGCGGGGAGGGTGCTCCAGAAGGTAGCCGTGCAGTGAGACATGGTAGCAGAGTCGGTATCGTTATAATATTTGCAATGGTTGTTTCTGTTGGACTAATGATCTTCGTAGGCATTTACATGAAAGTAGGGAAGAGAAGGCCACAACCTATCTCAGGTATGCAACCTAAAGTTTCCGAGGAATCCTTGCAATTATACTGTGGCGACATTCGTGTTGCCACAAATAACTTTTCTGAAGCAAATAAACTTGGAGATGATGAATATGGCATTGTTTACAGGGCAATTGATGGACATTCATCTGCAGAATCTGATGTCTACAGTTTTGGTGCGTTAGTCTTGGAGATGGTAAGTGGACAAGAAATTAGTAGTTTGGCGTCCGAAAAGCTAAATGAGAAGGATCTTCTGAGAAATGCATGGAAGAATTGGGCAGAAGGGACAATTAGAAATCTTTTAGATCCGACGTTGTGGACTGGTTCAGGAATTGAATTAATGGAGAGATGCATCGGGATCGGATTATTGTGTATGCAGAGGACTAGAACCGATAGGCCAACCATGTCGTCTGTTATTCAGATGCTTAGTCATTCTTCCGCTGTCCCTCTACCTAATAAATTTAGGCATGGTAGCTTTGGGATCGTTGGAACCTTGAACAATGTGGAAGGTATTTCTGATCCAAGATCTAGAGCAAAAGTTCAACCCTTCATTGCGAAGATGCGGCATGGTAGCTTTGGGATCATTGGATCCTTGAACAATGTGGCAGGTGTTTCTGATCCAAGGTCTAGAGCAAAAGTGCAGCCCTTCATTGGGAAGATCCGATATCCCACTACCGGCATCATCAATAAGATACGTAGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

566

Amino Acids

61.39

Weight (kDa)

8.27

Isoelectric Point (pI)

43.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	41 - 140	1.5e-23	Salt stress response/antifungal
Stress-antifung	PF01657	166 - 257	6.7e-08	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015694)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g25911
rosa_chinensis	RchiOBHm_Chr1g0372241 RchiOBHm_Chr1g0372291
rosa_laevigata	RLG00000026912 RLG00000026913 RLG00000026914
rosa_multiflora	Rmu_sc0001755.1_g000014 Rmu_sc0001755.1_g000017
rosa_roxburghii	Rroxscaffold_4G00285090 Rroxscaffold_4G00285120
rosa_rugosa	Rorug01G0370700
rosa_samantha	Rh1BG342500 Rh1CG356100 Rh1CG356200 Rh1DG373700 Rh1DG373900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	911
AarI	CACCTGC	2 cut(s)	545, 1589
Acc36I	ACCTGC	2 cut(s)	545, 1589
AccB7I	CCANNNNNTGG	1 cut(s)	384
AccBSI	CCGCTC	1 cut(s)	420
AccI	GTMKAC	1 cut(s)	1158
AccII	CGCG	3 cut(s)	71, 575, 788
AciI	CCGC	9 cut(s)	89, 99, 243, 333, 418, 612, 849, 1431, 1555
AcsI	RAATTY	3 cut(s)	491, 701, 1451
AcuI	CTGAAG	2 cut(s)	587, 1098
AcyI	GRCGYC	1 cut(s)	1217
AfaI	GTAC	4 cut(s)	58, 166, 389, 480
AfiI	CCNNNNNNNGG	7 cut(s)	384, 812, 838, 998, 1643, 1644, 1667
AgsI	TTSAA	9 cut(s)	126, 320, 545, 698, 763, 1328, 1489, 1535, 1588
AjiI	CACGTC	1 cut(s)	14
AluBI	AGCT	7 cut(s)	355, 548, 753, 772, 1228, 1467, 1566
AluI	AGCT	7 cut(s)	355, 548, 753, 772, 1228, 1467, 1566
Alw21I	GWGCWC	5 cut(s)	346, 357, 470, 647, 862
Alw26I	GTCTC	1 cut(s)	877
Alw44I	GTGCAC	1 cut(s)	643
AlwNI	CAGNNNCTG	2 cut(s)	101, 1151
AoxI	GGCC	3 cut(s)	375, 983, 1388
ApaLI	GTGCAC	1 cut(s)	643
ApeKI	GCWGC	7 cut(s)	91, 403, 445, 548, 551, 753, 1633
ApoI	RAATTY	3 cut(s)	491, 701, 1451
AseI	ATTAAT	1 cut(s)	1331
AspLEI	GCGC	1 cut(s)	408
AspS9I	GGNCC	1 cut(s)	775
AsuC2I	CCSGG	1 cut(s)	707
AsuHPI	GGTGA	1 cut(s)	508
AvaII	GGWCC	1 cut(s)	775
BaeGI	GKGCMC	1 cut(s)	647
BamHI	GGATCC	1 cut(s)	1580
BanII	GRGCYC	1 cut(s)	357
Bbv12I	GWGCWC	5 cut(s)	346, 357, 470, 647, 862
BbvI	GCAGC	7 cut(s)	103, 390, 457, 535, 563, 740, 1645
BccI	CCATC	5 cut(s)	490, 527, 713, 1124, 1180
BceAI	ACGGC	4 cut(s)	229, 625, 645, 858
BcgI	CGANNNNNNTGC	2 cut(s)	1333, 1367
BclI	TGATCA	2 cut(s)	42, 64
BcnI	CCSGG	1 cut(s)	707
BcoDI	GTCTC	1 cut(s)	877
BfaI	CTAG	3 cut(s)	1377, 1521, 1620
BfmI	CTRYAG	4 cut(s)	549, 601, 1143, 1159
BfuAI	ACCTGC	2 cut(s)	545, 1589
BglII	AGATCT	1 cut(s)	1517
BlpI	GCTNAGC	1 cut(s)	84
Bme1390I	CCNGG	1 cut(s)	707
Bme18I	GGWCC	1 cut(s)	775
BmgBI	CACGTC	1 cut(s)	14
BmgT120I	GGNCC	1 cut(s)	775
BmiI	GGNNCC	3 cut(s)	843, 1483, 1582
BmrFI	CCNGG	1 cut(s)	707
BmsI	GCATC	5 cut(s)	1331, 1353, 1404, 1542, 1680
BpmI	CTGGAG	1 cut(s)	846
Bpu1102I	GCTNAGC	1 cut(s)	84
BpuMI	CCSGG	1 cut(s)	707
BsaAI	YACGTR	1 cut(s)	1688
BsaBI	GATNNNNATC	1 cut(s)	47
BsaHI	GRCGYC	1 cut(s)	1217
BsaJI	CCNNGG	4 cut(s)	204, 258, 1020, 1613
BsaXI	ACNNNNNCTCC	4 cut(s)	218, 248, 826, 856
Bsc4I	CCNNNNNNNGG	7 cut(s)	384, 812, 838, 998, 1643, 1644, 1667
Bse118I	RCCGGY	1 cut(s)	1667
Bse1I	ACTGG	1 cut(s)	1318
Bse3DI	GCAATG	2 cut(s)	927, 1542
Bse8I	GATNNNNATC	1 cut(s)	47
BseDI	CCNNGG	4 cut(s)	204, 258, 1020, 1613
BseGI	GGATG	5 cut(s)	188, 254, 485, 519, 620
BseJI	GATNNNNATC	1 cut(s)	47
BseLI	CCNNNNNNNGG	7 cut(s)	384, 812, 838, 998, 1643, 1644, 1667
BseMI	GCAATG	2 cut(s)	927, 1542
BseMII	CTCAG	3 cut(s)	98, 1011, 1238
BseNI	ACTGG	1 cut(s)	1318
BseSI	GKGCMC	1 cut(s)	647
BseXI	GCAGC	7 cut(s)	103, 390, 457, 535, 563, 740, 1645
BseYI	CCCAGC	1 cut(s)	749
BsgI	GTGCAG	3 cut(s)	691, 897, 1652
Bsh1236I	CGCG	3 cut(s)	71, 575, 788
Bsh1285I	CGRYCG	1 cut(s)	153
BshFI	GGCC	3 cut(s)	377, 985, 1390
BsiEI	CGRYCG	1 cut(s)	153
BsiHKAI	GWGCWC	5 cut(s)	346, 357, 470, 647, 862
BsiSI	CCGG	2 cut(s)	707, 1668
BslFI	GGGAC	3 cut(s)	345, 1291, 1421
BslI	CCNNNNNNNGG	7 cut(s)	384, 812, 838, 998, 1643, 1644, 1667
BsmAI	GTCTC	1 cut(s)	877
BsmFI	GGGAC	3 cut(s)	345, 1291, 1421
BsnI	GGCC	3 cut(s)	377, 985, 1390
Bsp1286I	GDGCHC	5 cut(s)	346, 357, 470, 647, 862
Bsp1720I	GCTNAGC	1 cut(s)	84
Bsp68I	TCGCGA	1 cut(s)	575
BspACI	CCGC	9 cut(s)	89, 99, 243, 333, 418, 612, 849, 1431, 1555
BspANI	GGCC	3 cut(s)	377, 985, 1390
BspCNI	CTCAG	3 cut(s)	97, 1010, 1239
BspFNI	CGCG	3 cut(s)	71, 575, 788
BspLI	GGNNCC	3 cut(s)	843, 1483, 1582
BspMAI	CTGCAG	2 cut(s)	553, 1147
BspMI	ACCTGC	2 cut(s)	545, 1589
BsrBI	CCGCTC	1 cut(s)	420
BsrDI	GCAATG	2 cut(s)	927, 1542
BsrFI	RCCGGY	1 cut(s)	1667
BsrI	ACTGG	1 cut(s)	1318
BssAI	RCCGGY	1 cut(s)	1667
BssECI	CCNNGG	4 cut(s)	204, 258, 1020, 1613
BssNI	GRCGYC	1 cut(s)	1217
BssT1I	CCWWGG	2 cut(s)	204, 1613
Bst4CI	ACNGT	5 cut(s)	282, 618, 669, 1043, 1163
Bst6I	CTCTTC	1 cut(s)	971
BstACI	GRCGYC	1 cut(s)	1217
BstAPI	GCANNNNNTGC	2 cut(s)	269, 678
BstBAI	YACGTR	1 cut(s)	1688
BstC8I	GCNNGC	2 cut(s)	96, 401
BstDEI	CTNAG	5 cut(s)	84, 743, 997, 1247, 1418
BstDSI	CCRYGG	1 cut(s)	258
BstENI	CCTNNNNNAGG	1 cut(s)	996
BstF5I	GGATG	5 cut(s)	188, 254, 485, 519, 620
BstFNI	CGCG	3 cut(s)	71, 575, 788
BstHHI	GCGC	1 cut(s)	408
BstMAI	GTCTC	1 cut(s)	877
BstMCI	CGRYCG	1 cut(s)	153
BstMWI	GCNNNNNNNGC	6 cut(s)	269, 321, 341, 405, 474, 678
BstNSI	RCATGY	1 cut(s)	403
BstSCI	CCNGG	1 cut(s)	705
BstSFI	CTRYAG	4 cut(s)	549, 601, 1143, 1159
BstSLI	GKGCMC	1 cut(s)	647
BstSNI	TACGTA	1 cut(s)	1688
BstUI	CGCG	3 cut(s)	71, 575, 788
BstV1I	GCAGC	7 cut(s)	103, 390, 457, 535, 563, 740, 1645
BstX2I	RGATCY	6 cut(s)	815, 1240, 1297, 1517, 1580, 1650
BstYI	RGATCY	6 cut(s)	815, 1240, 1297, 1517, 1580, 1650
BsuRI	GGCC	3 cut(s)	377, 985, 1390
BtgI	CCRYGG	1 cut(s)	258
BtrI	CACGTC	1 cut(s)	14
BtsCI	GGATG	5 cut(s)	188, 254, 485, 519, 620
BtsI	GCAGTG	1 cut(s)	885
BtsIMutI	CAGTG	2 cut(s)	674, 885
BtuMI	TCGCGA	1 cut(s)	575
BveI	ACCTGC	2 cut(s)	545, 1589
Cac8I	GCNNGC	2 cut(s)	96, 401
CaiI	CAGNNNCTG	2 cut(s)	101, 1151
CfoI	GCGC	1 cut(s)	408
Cfr10I	RCCGGY	1 cut(s)	1667
Cfr13I	GGNCC	1 cut(s)	775
CseI	GACGC	2 cut(s)	794, 1206
Csp6I	GTAC	4 cut(s)	57, 165, 388, 479
CviAII	CATG	9 cut(s)	349, 400, 436, 887, 964, 1257, 1396, 1460, 1559
CviQI	GTAC	4 cut(s)	57, 165, 388, 479
DdeI	CTNAG	5 cut(s)	84, 743, 997, 1247, 1418
Eam1104I	CTCTTC	1 cut(s)	971
EarI	CTCTTC	1 cut(s)	971
EciI	GGCGGA	2 cut(s)	258, 627
Ecl136II	GAGCTC	1 cut(s)	355
Eco105I	TACGTA	1 cut(s)	1688
Eco130I	CCWWGG	2 cut(s)	204, 1613
Eco24I	GRGCYC	1 cut(s)	357
Eco32I	GATATC	1 cut(s)	1658
Eco47I	GGWCC	1 cut(s)	775
Eco53kI	GAGCTC	1 cut(s)	355
Eco57I	CTGAAG	2 cut(s)	587, 1098
EcoICRI	GAGCTC	1 cut(s)	355
EcoNI	CCTNNNNNAGG	1 cut(s)	996
EcoRI	GAATTC	1 cut(s)	701
EcoRV	GATATC	1 cut(s)	1658
EcoT14I	CCWWGG	2 cut(s)	204, 1613
EcoT22I	ATGCAT	2 cut(s)	1258, 1346
EcoT38I	GRGCYC	1 cut(s)	357
ErhI	CCWWGG	2 cut(s)	204, 1613
FaeI	CATG	9 cut(s)	352, 403, 439, 890, 967, 1260, 1399, 1463, 1562
FaqI	GGGAC	3 cut(s)	345, 1291, 1421
FatI	CATG	9 cut(s)	348, 399, 435, 886, 963, 1256, 1395, 1459, 1558
FauI	CCCGC	1 cut(s)	842
FbaI	TGATCA	2 cut(s)	42, 64
FblI	GTMKAC	1 cut(s)	1158
FokI	GGATG	5 cut(s)	175, 241, 472, 506, 607
FriOI	GRGCYC	1 cut(s)	357
FspBI	CTAG	3 cut(s)	1377, 1521, 1620
GlaI	GCGC	1 cut(s)	407
GsaI	CCCAGC	1 cut(s)	753
GsuI	CTGGAG	1 cut(s)	846
HaeIII	GGCC	3 cut(s)	377, 985, 1390
HapII	CCGG	2 cut(s)	707, 1668
HgaI	GACGC	2 cut(s)	794, 1206
HhaI	GCGC	1 cut(s)	408
Hin1I	GRCGYC	1 cut(s)	1217
Hin1II	CATG	9 cut(s)	352, 403, 439, 890, 967, 1260, 1399, 1463, 1562
Hin6I	GCGC	1 cut(s)	406
HinP1I	GCGC	1 cut(s)	406
HincII	GTYRAC	1 cut(s)	784
HindII	GTYRAC	1 cut(s)	784
HinfI	GANTC	4 cut(s)	155, 897, 1025, 1148
HpaII	CCGG	2 cut(s)	707, 1668
HphI	GGTGA	1 cut(s)	508
Hpy166II	GTNNAC	6 cut(s)	645, 784, 1117, 1159, 1196, 1311
Hpy188III	TCNNGA	8 cut(s)	574, 650, 813, 863, 1320, 1348, 1521, 1620
Hpy8I	GTNNAC	6 cut(s)	645, 784, 1117, 1159, 1196, 1311
Hpy99I	CGWCG	1 cut(s)	1306
HpyCH4III	ACNGT	5 cut(s)	282, 618, 669, 1043, 1163
HpyCH4IV	ACGT	5 cut(s)	13, 452, 836, 1304, 1687
HpyF10VI	GCNNNNNNNGC	6 cut(s)	269, 321, 341, 405, 474, 678
HpyF3I	CTNAG	5 cut(s)	84, 743, 997, 1247, 1418
HpySE526I	ACGT	5 cut(s)	13, 452, 836, 1304, 1687
Hsp92I	GRCGYC	1 cut(s)	1217
Hsp92II	CATG	9 cut(s)	352, 403, 439, 890, 967, 1260, 1399, 1463, 1562
HspAI	GCGC	1 cut(s)	406
Ksp22I	TGATCA	2 cut(s)	42, 64
LmnI	GCTCC	5 cut(s)	352, 425, 465, 847, 865
Lsp1109I	GCAGC	7 cut(s)	103, 390, 457, 535, 563, 740, 1645
LweI	GCATC	5 cut(s)	1331, 1353, 1404, 1542, 1680
MaeI	CTAG	3 cut(s)	1377, 1521, 1620
MaeII	ACGT	5 cut(s)	13, 452, 836, 1304, 1687
MaeIII	GTNAC	4 cut(s)	36, 137, 605, 663
MbiI	CCGCTC	1 cut(s)	420
MboII	GAAGA	8 cut(s)	710, 940, 988, 1235, 1273, 1419, 1561, 1660
MfeI	CAATTG	1 cut(s)	1125
MflI	RGATCY	6 cut(s)	815, 1240, 1297, 1517, 1580, 1650
MhlI	GDGCHC	5 cut(s)	346, 357, 470, 647, 862
MlyI	GAGTC	2 cut(s)	149, 906
MmeI	TCCRAC	3 cut(s)	916, 1325, 1459
MnlI	CCTC	9 cut(s)	19, 208, 244, 335, 367, 847, 1015, 1365, 1449
Mph1103I	ATGCAT	2 cut(s)	1258, 1346
MseI	TTAA	3 cut(s)	174, 626, 1331
MslI	CAYNNNNRTG	1 cut(s)	962
MspA1I	CMGCKG	5 cut(s)	101, 335, 753, 772, 1433
MspI	CCGG	2 cut(s)	707, 1668
MspR9I	CCNGG	1 cut(s)	707
MunI	CAATTG	1 cut(s)	1125
MvnI	CGCG	3 cut(s)	71, 575, 788
MwoI	GCNNNNNNNGC	6 cut(s)	269, 321, 341, 405, 474, 678
NciI	CCSGG	1 cut(s)	707
NlaIII	CATG	9 cut(s)	352, 403, 439, 890, 967, 1260, 1399, 1463, 1562
NlaIV	GGNNCC	3 cut(s)	843, 1483, 1582
NruI	TCGCGA	1 cut(s)	575
NsiI	ATGCAT	2 cut(s)	1258, 1346
NspI	RCATGY	1 cut(s)	403
PaeI	GCATGC	1 cut(s)	403
PaqCI	CACCTGC	2 cut(s)	545, 1589
PcsI	WCGNNNNNNNCGW	1 cut(s)	449
PfeI	GAWTC	2 cut(s)	1025, 1148
PflMI	CCANNNNNTGG	1 cut(s)	384
PfoI	TCCNGGA	1 cut(s)	705
PleI	GAGTC	2 cut(s)	149, 905
PpsI	GAGTC	2 cut(s)	149, 905
Ppu21I	YACGTR	1 cut(s)	1688
PshBI	ATTAAT	1 cut(s)	1331
PsiI	TTATAA	1 cut(s)	911
Psp124BI	GAGCTC	1 cut(s)	357
PspFI	CCCAGC	1 cut(s)	749
PspN4I	GGNNCC	3 cut(s)	843, 1483, 1582
PspPI	GGNCC	1 cut(s)	775
PstI	CTGCAG	2 cut(s)	553, 1147
PstNI	CAGNNNCTG	2 cut(s)	101, 1151
PsuI	RGATCY	6 cut(s)	815, 1240, 1297, 1517, 1580, 1650
PvuII	CAGCTG	2 cut(s)	753, 772
RruI	TCGCGA	1 cut(s)	575
RsaI	GTAC	4 cut(s)	58, 166, 389, 480
RsaNI	GTAC	4 cut(s)	57, 165, 388, 479
RseI	CAYNNNNRTG	1 cut(s)	962
SacI	GAGCTC	1 cut(s)	357
SaqAI	TTAA	3 cut(s)	174, 626, 1331
Sau96I	GGNCC	1 cut(s)	775
SchI	GAGTC	2 cut(s)	149, 906
ScrFI	CCNGG	1 cut(s)	707
SduI	GDGCHC	5 cut(s)	346, 357, 470, 647, 862
SfaNI	GCATC	5 cut(s)	1331, 1353, 1404, 1542, 1680
SfcI	CTRYAG	4 cut(s)	549, 601, 1143, 1159
SinI	GGWCC	1 cut(s)	775
SmiMI	CAYNNNNRTG	1 cut(s)	962
SnaBI	TACGTA	1 cut(s)	1688
SphI	GCATGC	1 cut(s)	403
SsiI	CCGC	9 cut(s)	89, 99, 243, 333, 418, 612, 849, 1431, 1555
SspI	AATATT	1 cut(s)	915
SspMI	CTAG	3 cut(s)	1377, 1521, 1620
SstI	GAGCTC	1 cut(s)	357
StyD4I	CCNGG	1 cut(s)	705
StyI	CCWWGG	2 cut(s)	204, 1613
TaaI	ACNGT	5 cut(s)	282, 618, 669, 1043, 1163
TaiI	ACGT	5 cut(s)	16, 455, 839, 1307, 1690
TaqI	TCGA	2 cut(s)	297, 528
TaqII	GACCGA	1 cut(s)	167
TauI	GCSGC	4 cut(s)	91, 101, 335, 1558
TfiI	GAWTC	2 cut(s)	1025, 1148
Tru1I	TTAA	3 cut(s)	174, 626, 1331
Tru9I	TTAA	3 cut(s)	174, 626, 1331
TscAI	CASTG	2 cut(s)	674, 885
TseI	GCWGC	7 cut(s)	91, 403, 445, 548, 551, 753, 1633
TspDTI	ATGAA	6 cut(s)	10, 980, 1116, 1128, 1531, 1630
TspGWI	ACGGA	1 cut(s)	247
TspRI	CASTG	2 cut(s)	674, 885
Van91I	CCANNNNNTGG	1 cut(s)	384
VneI	GTGCAC	1 cut(s)	643
VpaK11BI	GGWCC	1 cut(s)	775
VspI	ATTAAT	1 cut(s)	1331
XagI	CCTNNNNNAGG	1 cut(s)	996
XapI	RAATTY	3 cut(s)	491, 701, 1451
XbaI	TCTAGA	2 cut(s)	1520, 1619
XceI	RCATGY	1 cut(s)	403
XmiI	GTMKAC	1 cut(s)	1158
XspI	CTAG	3 cut(s)	1377, 1521, 1620
Zsp2I	ATGCAT	2 cut(s)	1258, 1346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.