RchiOBHm_Chr2g0089191

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
3468265 .. 3470928
2664 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46449

Sequence Viewer

Length: 2091 bp
ATGAAAATATTGAGAGCTGCTTCTGTTTTCCTTTGTATTTTCTTCTGCTTCTTTGTTTGCTCATCTCATGCAACAGATACCCTTAGGCCTGGTCAGTATTTGACGAGATATGAAACCTTGGTTTCTGATGGTGGAGTATTTGAGCTAGGCTTTTTCTACAGCCCCACTAAGTCAGTCGAAGGATACTTGGGAATCTGGTTGAAGAATGACAAAAAGAGAAGGCCAGTTTGGGTGGCAAATAGAGATGACCATCTTATGGATCCCTATGCACTTCTCTACATCAACCCTCAGGGAATGGTGATCAGTGATAATAGAAATTCACCGTTTTTTTTCACTTATGGAGCAACTGCAACGACTAATAGGACAAGGGCAAGGATTCTTGACTCAGGAAACCTAATCCTGATGGAAGGAGGAAAGACGGTGTGGCAGAGCTTTGATAACCTGGTAGATACATTTCTTCCTGGTATGAAAATAGGGATGGTTAGCATAACCAATGCTCAGTTGAAGCCTATGTTTCTTTTATCATGGAGAAGCGCACATGACCCTACTCGAGGTTTTCTTGGTTTAAGCTTGGATAAGAGCACAACTCAAGTCGATGTCTGGCACGATGATGGTAAAGAGAAACCAATTGGCCATTGGGACGGCCATGAGTTCAAATTTGTTTTCAAAACCCAATCAGATAATTACAATTTCAGCTATGTACTGAACAGCAAGGAGCGTTATCTTACTTTCAACAACAAAGAAAGTAGTGTATATTCATGGTTTGCATTGGCTTCGGATGGTAAGATACAGGAGTTCATGATGGTAGGACAGAAGATTTCGGTTGTGAGTCATTCGGTATGTGGTGACTGCTGGTTGGTGTCATCAAGAGATAGGAAGCTGTTGCTGGTCATCAAAGTTGTGGTTCCCTTGACTTTCTCCATTTTGATGTTGATCTTGTTCCTGTATTGTTTATGGAGAAAGCACAACTCTTTAGGAATTTACAGATTCTATATTGGCAGGACAGACAGTGTGAAGCTATTATTATCACAGTTGAGTTCTGATGATAGTGGTAGCAGTTCACCTGTTGTAGAACTTGGAAAGACGAAGGATCATGCTTTGCCAATGCTTAGCTTTTCCTGCATAGTGGCATCCACTAATAATTTCTCAGTTGCTAACAAGCTTGGAGAAGGAGGTTATGGGCCTGTTTATAAGGGTAACTTACTGCAACACGACATTGCGGTCAAAAGGCTTTCAAAAAGATCTGGACAAGGATTAGCGGAGTTCAAGAATGAGGTGCAGTTAATATCTCAGCTCCAGCACAGAAATCTTGTTAAGATTTTGGGCTGTTGCATTCAACGAGAAGAAAAAATATTAATATACGAGTATATGTCCAACAAAAGTTTGGATTCCTTCATTTTTGATCCAATTAAGCGAAGACAACTGAATTGGAGACAGCGCATACACATAATCGAAGGGATTGCTCAAGGGCTTCTTTATCTTCACAAGTACTCTAGACTAAGAATTATTCATCGAGACCTCAAAACTAGCAACATCTTATTGGATGCCTATATGAACCCCAAGATATCAGACTTTGGCTTGGCCAGAATCTTATCCGGGAATGAATGTGGGGCTGAAACAAAGCGGATTGTTGGAACATTCGGTTATATGTCTCCCGAGTATGTATTACAAGGCCTTTTGTCAACAAAATCGGATGTATTCAGCTTTGGAGTCATTGTGTTGGAGATTATGAGTGGCATGAAGAATGCAACCTTTTATGAGTCAGATTATTCTTTGAACTTGCTAGGACATGCCTGGAATTTATGGATATCTGGACGATGTGAAGAGATGATAGATCCAACATTAGCTGATTCAAGTTCAAGGGATGGTCTTGTACTCTGCATTCAGGTAGGTCTTTTATGCGTTCAAGATTGTGCCGAAGATAGACCAACCATGTCAGAAGTTGTTTCAATGTTGAGCACTGAAGGAGCTAGTTTACCTAAGCCAAAGCAGCCTATGTATTCTAACTTAATGTCAGAAGTAGATAAAGCTTTAAGAAGTGGAGTCCCTTCTGAGAATCTCTTGACATATTCATCAATAGTAGCAAGATAG

Protein Analysis

696

Amino Acids

78.64

Weight (kDa)

8.77

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 177 1.3e-20 D-mannose binding lectin
Pkinase PF00069 383 - 596 6.2e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 384 - 582 4.6e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015514)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1191
AasI GACNNNNNNGTC 1 cut(s) 1220
AccB7I CCANNNNNTGG 1 cut(s) 256
AciI CCGC 3 cut(s) 1220, 1259, 1624
AclWI GGATC 5 cut(s) 254, 267, 1098, 1397, 1829
AcoI YGGCCR 3 cut(s) 631, 643, 1581
AcsI RAATTY 4 cut(s) 316, 656, 978, 1798
AcuI CTGAAG 1 cut(s) 1983
AfaI GTAC 3 cut(s) 702, 1490, 1875
AfiI CCNNNNNNNGG 2 cut(s) 256, 551
AjnI CCWGG 4 cut(s) 88, 441, 460, 1793
AjuI GAANNNNNNNTTGG 2 cut(s) 211, 243
Alw21I GWGCWC 2 cut(s) 584, 1961
Alw26I GTCTC 3 cut(s) 1426, 1509, 1656
AlwI GGATC 5 cut(s) 254, 267, 1098, 1397, 1829
Ama87I CYCGRG 2 cut(s) 549, 1655
AoxI GGCC 7 cut(s) 86, 221, 631, 643, 1181, 1581, 1672
ApeKI GCWGC 2 cut(s) 17, 1990
ApoI RAATTY 4 cut(s) 316, 656, 978, 1798
AseI ATTAAT 1 cut(s) 1355
AspLEI GCGC 2 cut(s) 536, 1440
AspS9I GGNCC 1 cut(s) 1181
AsuC2I CCSGG 1 cut(s) 1597
AsuHPI GGTGA 4 cut(s) 310, 312, 857, 1053
AvaI CYCGRG 2 cut(s) 549, 1655
AxyI CCTNAGG 2 cut(s) 83, 288
BaeI ACNNNNGTAYC 2 cut(s) 779, 812
BalI TGGCCA 2 cut(s) 633, 1583
BamHI GGATCC 1 cut(s) 259
BbsI GAAGAC 1 cut(s) 1423
Bbv12I GWGCWC 2 cut(s) 584, 1961
BbvI GCAGC 2 cut(s) 4, 2002
BccI CCATC 8 cut(s) 122, 258, 397, 472, 605, 773, 796, 1859
BceAI ACGGC 1 cut(s) 658
BcgI CGANNNNNNTGC 4 cut(s) 756, 790, 1442, 1476
BciT130I CCWGG 4 cut(s) 90, 443, 462, 1795
BciVI GTATCC 1 cut(s) 176
BclI TGATCA 1 cut(s) 300
BcnI CCSGG 1 cut(s) 1597
BcoDI GTCTC 3 cut(s) 1426, 1509, 1656
BfaI CTAG 5 cut(s) 146, 1494, 1527, 1784, 1971
BfmI CTRYAG 1 cut(s) 157
BfuI GTATCC 1 cut(s) 176
BglII AGATCT 1 cut(s) 1241
BisI GCNGC 2 cut(s) 18, 1991
BlpI GCTNAGC 1 cut(s) 1109
BlsI GCNGC 2 cut(s) 19, 1992
BmcAI AGTACT 1 cut(s) 1490
Bme1390I CCNGG 5 cut(s) 90, 443, 462, 1597, 1795
BmeT110I CYCGRG 2 cut(s) 549, 1655
BmgT120I GGNCC 1 cut(s) 1181
BmiI GGNNCC 2 cut(s) 261, 906
BmrFI CCNGG 5 cut(s) 90, 443, 462, 1597, 1795
BmsI GCATC 2 cut(s) 1139, 1534
BpiI GAAGAC 1 cut(s) 1423
BplI GAGNNNNNCTC 2 cut(s) 571, 603
BpmI CTGGAG 1 cut(s) 1280
Bpu10I CCTNAGC 1 cut(s) 1980
Bpu1102I GCTNAGC 1 cut(s) 1109
BpuEI CTTGAG 2 cut(s) 573, 1449
BpuMI CCSGG 1 cut(s) 1597
BsaBI GATNNNNATC 2 cut(s) 249, 932
BsaI GGTCTC 1 cut(s) 1509
BsaJI CCNNGG 1 cut(s) 117
BsaXI ACNNNNNCTCC 2 cut(s) 1701, 1731
Bsc4I CCNNNNNNNGG 2 cut(s) 256, 551
Bse1I ACTGG 1 cut(s) 224
Bse21I CCTNAGG 2 cut(s) 83, 288
Bse3DI GCAATG 1 cut(s) 1215
Bse8I GATNNNNATC 2 cut(s) 249, 932
BseBI CCWGG 4 cut(s) 90, 443, 462, 1795
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 6 cut(s) 483, 784, 1130, 1549, 1699, 1870
BseJI GATNNNNATC 2 cut(s) 249, 932
BseLI CCNNNNNNNGG 2 cut(s) 256, 551
BseMI GCAATG 1 cut(s) 1215
BseMII CTCAG 6 cut(s) 302, 399, 512, 1161, 1304, 2043
BseNI ACTGG 1 cut(s) 224
BseXI GCAGC 2 cut(s) 4, 2002
BsgI GTGCAG 1 cut(s) 1298
BshFI GGCC 7 cut(s) 88, 223, 633, 645, 1183, 1583, 1674
BsiHKAI GWGCWC 2 cut(s) 584, 1961
BsiHKCI CYCGRG 2 cut(s) 549, 1655
BsiSI CCGG 1 cut(s) 1596
BslFI GGGAC 2 cut(s) 653, 2030
BslI CCNNNNNNNGG 2 cut(s) 256, 551
BsmAI GTCTC 3 cut(s) 1426, 1509, 1656
BsmFI GGGAC 2 cut(s) 653, 2030
BsmI GAATGC 3 cut(s) 1332, 1750, 1881
BsnI GGCC 7 cut(s) 88, 223, 633, 645, 1183, 1583, 1674
Bso31I GGTCTC 1 cut(s) 1509
BsoBI CYCGRG 2 cut(s) 549, 1655
Bsp1286I GDGCHC 2 cut(s) 584, 1961
Bsp143I GATC 7 cut(s) 259, 300, 933, 1090, 1241, 1402, 1834
Bsp1720I GCTNAGC 1 cut(s) 1109
BspACI CCGC 3 cut(s) 1220, 1259, 1624
BspANI GGCC 7 cut(s) 88, 223, 633, 645, 1183, 1583, 1674
BspCNI CTCAG 6 cut(s) 301, 398, 511, 1160, 1303, 2044
BspHI TCATGA 1 cut(s) 798
BspLI GGNNCC 2 cut(s) 261, 906
BspPI GGATC 5 cut(s) 254, 267, 1098, 1397, 1829
BspTNI GGTCTC 1 cut(s) 1509
BsrDI GCAATG 1 cut(s) 1215
BsrI ACTGG 1 cut(s) 224
BssECI CCNNGG 1 cut(s) 117
BssMI GATC 7 cut(s) 259, 300, 933, 1090, 1241, 1402, 1834
BssT1I CCWWGG 1 cut(s) 117
Bst2UI CCWGG 4 cut(s) 90, 443, 462, 1795
Bst4CI ACNGT 4 cut(s) 324, 421, 1010, 1032
Bst6I CTCTTC 1 cut(s) 1818
BstENI CCTNNNNNAGG 1 cut(s) 549
BstF5I GGATG 6 cut(s) 483, 784, 1130, 1549, 1699, 1870
BstHHI GCGC 2 cut(s) 536, 1440
BstKTI GATC 7 cut(s) 262, 303, 936, 1093, 1244, 1405, 1837
BstMAI GTCTC 3 cut(s) 1426, 1509, 1656
BstMBI GATC 7 cut(s) 259, 300, 933, 1090, 1241, 1402, 1834
BstMWI GCNNNNNNNGC 2 cut(s) 1119, 1990
BstNI CCWGG 4 cut(s) 90, 443, 462, 1795
BstNSI RCATGY 1 cut(s) 1793
BstSCI CCNGG 5 cut(s) 88, 441, 460, 1595, 1793
BstSFI CTRYAG 1 cut(s) 157
BstV1I GCAGC 2 cut(s) 4, 2002
BstV2I GAAGAC 1 cut(s) 1423
BstX2I RGATCY 3 cut(s) 259, 1241, 1834
BstYI RGATCY 3 cut(s) 259, 1241, 1834
Bsu36I CCTNAGG 2 cut(s) 83, 288
BsuI GTATCC 1 cut(s) 176
BsuRI GGCC 7 cut(s) 88, 223, 633, 645, 1183, 1583, 1674
BtsCI GGATG 6 cut(s) 483, 784, 1130, 1549, 1699, 1870
BtsIMutI CAGTG 3 cut(s) 310, 1015, 1959
CciI TCATGA 1 cut(s) 798
CfoI GCGC 2 cut(s) 536, 1440
Cfr13I GGNCC 1 cut(s) 1181
CsiI ACCWGGT 1 cut(s) 441
Csp6I GTAC 3 cut(s) 701, 1489, 1874
CviQI GTAC 3 cut(s) 701, 1489, 1874
DpnI GATC 7 cut(s) 261, 302, 935, 1092, 1243, 1404, 1836
DpnII GATC 7 cut(s) 259, 300, 933, 1090, 1241, 1402, 1834
DrdI GACNNNNNNGTC 1 cut(s) 1220
DseDI GACNNNNNNGTC 1 cut(s) 1220
EaeI YGGCCR 3 cut(s) 631, 643, 1581
Eam1104I CTCTTC 1 cut(s) 1818
EarI CTCTTC 1 cut(s) 1818
Eco130I CCWWGG 1 cut(s) 117
Eco147I AGGCCT 2 cut(s) 88, 1674
Eco31I GGTCTC 1 cut(s) 1509
Eco32I GATATC 2 cut(s) 1566, 1809
Eco57I CTGAAG 1 cut(s) 1983
Eco81I CCTNAGG 2 cut(s) 83, 288
Eco88I CYCGRG 2 cut(s) 549, 1655
EcoNI CCTNNNNNAGG 1 cut(s) 549
EcoRII CCWGG 4 cut(s) 88, 441, 460, 1793
EcoRV GATATC 2 cut(s) 1566, 1809
EcoT14I CCWWGG 1 cut(s) 117
ErhI CCWWGG 1 cut(s) 117
FalI AAGNNNNNCTT 4 cut(s) 1184, 1216, 1458, 1490
FaqI GGGAC 2 cut(s) 653, 2030
FbaI TGATCA 1 cut(s) 300
Fnu4HI GCNGC 2 cut(s) 18, 1991
FokI GGATG 6 cut(s) 490, 791, 1117, 1556, 1706, 1877
Fsp4HI GCNGC 2 cut(s) 18, 1991
FspBI CTAG 5 cut(s) 146, 1494, 1527, 1784, 1971
GlaI GCGC 2 cut(s) 535, 1439
GluI GCNGC 2 cut(s) 18, 1991
GsuI CTGGAG 1 cut(s) 1280
HaeIII GGCC 7 cut(s) 88, 223, 633, 645, 1183, 1583, 1674
HapII CCGG 1 cut(s) 1596
HhaI GCGC 2 cut(s) 536, 1440
Hin6I GCGC 2 cut(s) 534, 1438
HinP1I GCGC 2 cut(s) 534, 1438
HincII GTYRAC 1 cut(s) 1683
HindII GTYRAC 1 cut(s) 1683
HindIII AAGCTT 3 cut(s) 568, 1160, 2028
HpaII CCGG 1 cut(s) 1596
HphI GGTGA 4 cut(s) 310, 312, 857, 1053
Hpy166II GTNNAC 3 cut(s) 1061, 1683, 1976
Hpy8I GTNNAC 3 cut(s) 1061, 1683, 1976
HpyAV CCTTC 9 cut(s) 173, 213, 401, 1081, 1163, 1402, 1448, 1958, 2058
HpyCH4III ACNGT 4 cut(s) 324, 421, 1010, 1032
HpyF10VI GCNNNNNNNGC 2 cut(s) 1119, 1990
HspAI GCGC 2 cut(s) 534, 1438
Ksp22I TGATCA 1 cut(s) 300
Kzo9I GATC 7 cut(s) 259, 300, 933, 1090, 1241, 1402, 1834
LmnI GCTCC 4 cut(s) 341, 715, 1299, 1967
Lsp1109I GCAGC 2 cut(s) 4, 2002
LweI GCATC 2 cut(s) 1139, 1534
MabI ACCWGGT 1 cut(s) 441
MaeI CTAG 5 cut(s) 146, 1494, 1527, 1784, 1971
MaeIII GTNAC 2 cut(s) 845, 1196
MalI GATC 7 cut(s) 261, 302, 935, 1092, 1243, 1404, 1836
MboI GATC 7 cut(s) 259, 300, 933, 1090, 1241, 1402, 1834
MfeI CAATTG 1 cut(s) 627
MflI RGATCY 3 cut(s) 259, 1241, 1834
MhlI GDGCHC 2 cut(s) 584, 1961
MlsI TGGCCA 2 cut(s) 633, 1583
MluNI TGGCCA 2 cut(s) 633, 1583
MlyI GAGTC 5 cut(s) 377, 838, 1719, 1769, 2052
MmeI TCCRAC 4 cut(s) 1398, 1612, 1701, 1862
MnlI CCTC 6 cut(s) 297, 404, 545, 1166, 1267, 1529
Mox20I TGGCCA 2 cut(s) 633, 1583
MscI TGGCCA 2 cut(s) 633, 1583
MseI TTAA 7 cut(s) 566, 1283, 1314, 1355, 1410, 2009, 2033
MslI CAYNNNNRTG 2 cut(s) 609, 926
Msp20I TGGCCA 2 cut(s) 633, 1583
MspI CCGG 1 cut(s) 1596
MspR9I CCNGG 5 cut(s) 90, 443, 462, 1597, 1795
MunI CAATTG 1 cut(s) 627
Mva1269I GAATGC 3 cut(s) 1332, 1750, 1881
MvaI CCWGG 4 cut(s) 90, 443, 462, 1795
MwoI GCNNNNNNNGC 2 cut(s) 1119, 1990
NciI CCSGG 1 cut(s) 1597
NdeII GATC 7 cut(s) 259, 300, 933, 1090, 1241, 1402, 1834
NlaIV GGNNCC 2 cut(s) 261, 906
NmuCI GTSAC 1 cut(s) 845
NspI RCATGY 1 cut(s) 1793
PaeR7I CTCGAG 1 cut(s) 549
PagI TCATGA 1 cut(s) 798
PceI AGGCCT 2 cut(s) 88, 1674
PctI GAATGC 3 cut(s) 1332, 1750, 1881
PfeI GAWTC 7 cut(s) 192, 376, 987, 1388, 1587, 1850, 2056
PflMI CCANNNNNTGG 1 cut(s) 256
PfoI TCCNGGA 1 cut(s) 1595
PkrI GCNGC 2 cut(s) 19, 1992
PleI GAGTC 5 cut(s) 377, 837, 1718, 1768, 2051
PpsI GAGTC 5 cut(s) 377, 837, 1718, 1768, 2051
PshBI ATTAAT 1 cut(s) 1355
PsiI TTATAA 1 cut(s) 1191
Psp6I CCWGG 4 cut(s) 88, 441, 460, 1793
PspGI CCWGG 4 cut(s) 88, 441, 460, 1793
PspN4I GGNNCC 2 cut(s) 261, 906
PspPI GGNCC 1 cut(s) 1181
PspXI VCTCGAGB 1 cut(s) 549
PsuI RGATCY 3 cut(s) 259, 1241, 1834
RsaI GTAC 3 cut(s) 702, 1490, 1875
RsaNI GTAC 3 cut(s) 701, 1489, 1874
RseI CAYNNNNRTG 2 cut(s) 609, 926
SaqAI TTAA 7 cut(s) 566, 1283, 1314, 1355, 1410, 2009, 2033
SatI GCNGC 2 cut(s) 18, 1991
Sau3AI GATC 7 cut(s) 259, 300, 933, 1090, 1241, 1402, 1834
Sau96I GGNCC 1 cut(s) 1181
ScaI AGTACT 1 cut(s) 1490
SchI GAGTC 5 cut(s) 377, 838, 1719, 1769, 2052
ScrFI CCNGG 5 cut(s) 90, 443, 462, 1597, 1795
SduI GDGCHC 2 cut(s) 584, 1961
SexAI ACCWGGT 1 cut(s) 441
SfaNI GCATC 2 cut(s) 1139, 1534
SfcI CTRYAG 1 cut(s) 157
Sfr274I CTCGAG 1 cut(s) 549
SlaI CTCGAG 1 cut(s) 549
SmiMI CAYNNNNRTG 2 cut(s) 609, 926
SmlI CTYRAG 3 cut(s) 549, 588, 1464
SmoI CTYRAG 3 cut(s) 549, 588, 1464
SseBI AGGCCT 2 cut(s) 88, 1674
SsiI CCGC 3 cut(s) 1220, 1259, 1624
SspI AATATT 2 cut(s) 9, 1353
SspMI CTAG 5 cut(s) 146, 1494, 1527, 1784, 1971
StuI AGGCCT 2 cut(s) 88, 1674
StyD4I CCNGG 5 cut(s) 88, 441, 460, 1595, 1793
StyI CCWWGG 1 cut(s) 117
TaaI ACNGT 4 cut(s) 324, 421, 1010, 1032
TaqI TCGA 5 cut(s) 177, 550, 594, 1452, 1513
TatI WGTACW 3 cut(s) 700, 1488, 1873
TfiI GAWTC 7 cut(s) 192, 376, 987, 1388, 1587, 1850, 2056
Tru1I TTAA 7 cut(s) 566, 1283, 1314, 1355, 1410, 2009, 2033
Tru9I TTAA 7 cut(s) 566, 1283, 1314, 1355, 1410, 2009, 2033
TscAI CASTG 3 cut(s) 310, 1015, 1966
TseFI GTSAC 1 cut(s) 845
TseI GCWGC 2 cut(s) 17, 1990
Tsp45I GTSAC 1 cut(s) 845
TspRI CASTG 3 cut(s) 310, 1015, 1966
Van91I CCANNNNNTGG 1 cut(s) 256
VspI ATTAAT 1 cut(s) 1355
XagI CCTNNNNNAGG 1 cut(s) 549
XapI RAATTY 4 cut(s) 316, 656, 978, 1798
XbaI TCTAGA 1 cut(s) 1493
XceI RCATGY 1 cut(s) 1793
XcmI CCANNNNNNNNNTGG 2 cut(s) 633, 1381
XhoI CTCGAG 1 cut(s) 549
XspI CTAG 5 cut(s) 146, 1494, 1527, 1784, 1971
ZrmI AGTACT 1 cut(s) 1490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.