Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0015514

Physical Location & Seq

Genomic Coordinates Forward (+)

89221672 .. 89224439

Gene Structure 2768 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00152160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGAAAATATTGAGAGCTGCTTCTGTTTTCCTTTCTATATTCTTCTGCTTCTTTGTTTGCTCATCTCATGCAACAGATACCCTTAGGCCTGGTCAGCATTTGAAGAGATATGAAACCTTGGTTTCTGATGGTGGAGTATTTGAGCTAGGCTTTTTCTACAGCCCCACAAAGTCAGTTGAAGGATACTTGGGAATCTGGTTGAAGAATGACAAAAAGAAAAGGCCAGTTTGGGTGGCAAATAGAGATGACCATCTTATGGATCTCTATGCAGTTCTCTACTTCAACCCTCAGGGAATGGTGATCAGTGATAATAGAAATTCACCTTTTTTTTTCACTTACGGAGCACCTGCAACGACTAATAGAACAAGCGCAAGAATTCTTGACTCGGGAAACCTAATCCTGATGGAAGGAGGAAAGATTGTGTGGCAGAGCTTCGATAACCTGGTAGATACATTTCTTCCTGGAATGAAAATGGGGATGGTTAGCATAACCAATTCTCAGTTGAAGCCTATGTTTCTTTTATCATGGAAAAGCGCACGTGACCCTACTAGTGGTTTTCTTGGTTTAAGCTTGGATGACAGCTCAACTCAAGTCAATGTCTGGCACGCTGATGGTAAAGATAAACAGATTGGCCATTGGGACGGCCATGAGTTCAAGTTTGTTTTCAAAACCAGATCAGATAATTACAATTTCAGCTATGTATTGAACAGCAAGGAGCGTTATCTTACTTTCAACAACAAAGAAAGTAATGTATATTCATGGTTTGCATTGGCTTCGGATGGTAAGATCCTGGAGTTCATTAAGGTAGGACAGAAGATTTCGGTTGTGAGTCATTCGGTATGTGGTGACTGCTGGTTGGTGTCATCAAGAGAAAGGAAGCTGTTGCTGGCTGTCAAAGTTGTGGTTCCCTTGACTTTCTTCATTTTGGTCCTGATCTTGTTCCTGTATTGTTTGTGGAGAAAGCGTAACTCTTTAGGAATTTACAGATTCTATATTGGCAGGACAGACAGTATGAAGCTACTATTGTCACAGTTGAGTTCTGATGATAGTGGTAACAGTTCACCTGTTATAGAACTTGGAAAGACGAAGGATCATGCTTTGCCAACGCTTAGCTTTTCCTGCATAGTGGCATCCACTAATAATTTCTCAGTTGCTAACAAGCTTGGAGAAGGAGGTTATGGGCCTGTTTATAAGCAGGGTAACTTACTGCAACACGACATTGCGGTCAAAAGGCTTTCCAAAAGATCTGGACAAGGATTGGTGGAGTTCAAGAATGAGTTGCAGTTAATCTCTCAGCTCCAGCACAGAAATCTTGTCAAGATTTTGGGCTGTTGCATTCAACGAGAAGAGAAAATATTAATATATGAGTATATGTCCAACAGAAGTTTGGATTCCTTCATTTTTGATCCAACTAAGCGAAGACAACTGAATTGGAGACAACGCATACACATAATCGAAGGGATTGCTCAAGGACTTCTTTATCTTCACAAATACTCTAGATTAAGAATTATTCATCGAGACCTCAAAACTAGCAACATTTTATTGGATGCTTATATGAACCCCAAGATATCAGACTTTGGGTTGGCTAGAATCTTATCCGGGAATGAATGTGGCGCTGAAACAAAGCGGATTGCTGGAACATTTGGTTATATGTCTCCCGAGTATGTATTGCAAGGCCTCTTGTCAACAAAATCGGATGTATTCAGCTTTGGAGTCATTGTGTTGGAGATTATGAGTGGCATGAAGAATGCAACCTTTTATGAGTCAGATTATTCTTTGAACTTGCTAGGACATGCCTGGAATTTATGGATATCTGGACGATGCGAAGAGATGATAGATCCAACATTAGCTGATTCAAGTTCAAGGGATGGTCTTGTACTCTGCATTCAGGTAGGTCTTTTATGCGTTCAAGATTGTGCAGAAGATAGACCAACCATGTCAGAAGTTGTTTCAATGTTGAACACTGGAGGAGCTAGTTTACCTAAGCCAAAGCAGCCTATGTATTCAAACTTAATGTCAGAGGTAGATAAAGCATTAAGAAGTGGAGTCCCTTCTGAGAATCTCTTGACATATTCATCAATAGTAGCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

697

Amino Acids

78.67

Weight (kDa)

9.01

Isoelectric Point (pI)

46.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	76 - 177	2.9e-20	D-mannose binding lectin
Pkinase	PF00069	383 - 597	5e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	384 - 583	3.7e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015514)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g03780
malus_domestica	MD02G1036400.v1.1 MD15G1176600.v1.1
prunus_persica	Prupe.7G239000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0089191
rosa_laevigata	RLG00000016003
rosa_multiflora	Rmu_sc0008322.1_g000027 Rmu_sc0008909.1_g000009
rosa_roxburghii	Rroxscaffold_2G00152160
rosa_rugosa	Rorug01G0488300
rosa_samantha	Rh2AG043900 Rh2BG042600 Rh2CG044100 Rh2DG042900
rosa_wichuraiana	Rw2G003920 Rw2G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1191
AarI	CACCTGC	1 cut(s)	355
AasI	GACNNNNNNGTC	1 cut(s)	1223
Acc36I	ACCTGC	1 cut(s)	355
AccB7I	CCANNNNNTGG	1 cut(s)	256
AciI	CCGC	2 cut(s)	1223, 1627
AclWI	GGATC	5 cut(s)	267, 781, 1098, 1400, 1832
AcoI	YGGCCR	2 cut(s)	631, 643
AcsI	RAATTY	4 cut(s)	316, 375, 978, 1801
AcvI	CACGTG	1 cut(s)	539
AfaI	GTAC	1 cut(s)	1878
AfiI	CCNNNNNNNGG	2 cut(s)	256, 551
AhlI	ACTAGT	1 cut(s)	548
AjnI	CCWGG	5 cut(s)	88, 441, 460, 789, 1796
Alw21I	GWGCWC	1 cut(s)	346
Alw26I	GTCTC	3 cut(s)	1429, 1512, 1659
AlwI	GGATC	5 cut(s)	267, 781, 1098, 1400, 1832
Ama87I	CYCGRG	2 cut(s)	385, 1658
AoxI	GGCC	6 cut(s)	86, 221, 631, 643, 1181, 1675
ApeKI	GCWGC	2 cut(s)	17, 1993
ApoI	RAATTY	4 cut(s)	316, 375, 978, 1801
ArsI	GACNNNNNNTTYG	2 cut(s)	2000, 2032
AseI	ATTAAT	1 cut(s)	1358
AspLEI	GCGC	3 cut(s)	371, 536, 1616
AspS9I	GGNCC	2 cut(s)	928, 1181
AsuC2I	CCSGG	1 cut(s)	1600
AsuHPI	GGTGA	4 cut(s)	310, 312, 857, 1053
AvaI	CYCGRG	2 cut(s)	385, 1658
AvaII	GGWCC	1 cut(s)	928
AxyI	CCTNAGG	2 cut(s)	83, 288
BalI	TGGCCA	1 cut(s)	633
BbrPI	CACGTG	1 cut(s)	539
BbsI	GAAGAC	1 cut(s)	1426
Bbv12I	GWGCWC	1 cut(s)	346
BbvI	GCAGC	2 cut(s)	4, 2005
BccI	CCATC	7 cut(s)	122, 258, 397, 472, 605, 773, 1862
BceAI	ACGGC	1 cut(s)	658
BcgI	CGANNNNNNTGC	4 cut(s)	756, 790, 1445, 1479
BciT130I	CCWGG	5 cut(s)	90, 443, 462, 791, 1798
BciVI	GTATCC	1 cut(s)	176
BclI	TGATCA	1 cut(s)	300
BcnI	CCSGG	1 cut(s)	1600
BcoDI	GTCTC	3 cut(s)	1429, 1512, 1659
BcuI	ACTAGT	1 cut(s)	548
BfaI	CTAG	7 cut(s)	146, 549, 1497, 1530, 1587, 1787, 1974
BfmI	CTRYAG	1 cut(s)	157
BfoI	RGCGCY	1 cut(s)	1617
BfuAI	ACCTGC	1 cut(s)	355
BfuI	GTATCC	1 cut(s)	176
BglII	AGATCT	1 cut(s)	1244
BisI	GCNGC	2 cut(s)	18, 1994
BlpI	GCTNAGC	1 cut(s)	1109
BlsI	GCNGC	2 cut(s)	19, 1995
Bme1390I	CCNGG	6 cut(s)	90, 443, 462, 791, 1600, 1798
Bme18I	GGWCC	1 cut(s)	928
BmeT110I	CYCGRG	2 cut(s)	385, 1658
BmgT120I	GGNCC	2 cut(s)	928, 1181
BmiI	GGNNCC	1 cut(s)	906
BmrFI	CCNGG	6 cut(s)	90, 443, 462, 791, 1600, 1798
BmsI	GCATC	3 cut(s)	1139, 1537, 1811
BpiI	GAAGAC	1 cut(s)	1426
BpmI	CTGGAG	3 cut(s)	812, 1283, 1986
Bpu10I	CCTNAGC	1 cut(s)	1983
Bpu1102I	GCTNAGC	1 cut(s)	1109
BpuEI	CTTGAG	2 cut(s)	573, 1452
BpuMI	CCSGG	1 cut(s)	1600
BsaAI	YACGTR	1 cut(s)	539
BsaBI	GATNNNNATC	1 cut(s)	249
BsaI	GGTCTC	1 cut(s)	1512
BsaJI	CCNNGG	1 cut(s)	117
BsaXI	ACNNNNNCTCC	4 cut(s)	949, 979, 1704, 1734
Bsc4I	CCNNNNNNNGG	2 cut(s)	256, 551
Bse1I	ACTGG	2 cut(s)	224, 1969
Bse21I	CCTNAGG	2 cut(s)	83, 288
Bse3DI	GCAATG	1 cut(s)	1218
Bse8I	GATNNNNATC	1 cut(s)	249
BseBI	CCWGG	5 cut(s)	90, 443, 462, 791, 1798
BseDI	CCNNGG	1 cut(s)	117
BseGI	GGATG	7 cut(s)	483, 580, 784, 1130, 1552, 1702, 1873
BseJI	GATNNNNATC	1 cut(s)	249
BseLI	CCNNNNNNNGG	2 cut(s)	256, 551
BseMI	GCAATG	1 cut(s)	1218
BseMII	CTCAG	5 cut(s)	302, 512, 1161, 1307, 2046
BseNI	ACTGG	2 cut(s)	224, 1969
BseRI	GAGGAG	1 cut(s)	1983
BseXI	GCAGC	2 cut(s)	4, 2005
BsgI	GTGCAG	1 cut(s)	1938
BshFI	GGCC	6 cut(s)	88, 223, 633, 645, 1183, 1677
BsiHKAI	GWGCWC	1 cut(s)	346
BsiHKCI	CYCGRG	2 cut(s)	385, 1658
BsiSI	CCGG	1 cut(s)	1599
BslFI	GGGAC	2 cut(s)	653, 2033
BslI	CCNNNNNNNGG	2 cut(s)	256, 551
BsmAI	GTCTC	3 cut(s)	1429, 1512, 1659
BsmFI	GGGAC	2 cut(s)	653, 2033
BsmI	GAATGC	3 cut(s)	1335, 1753, 1884
BsnI	GGCC	6 cut(s)	88, 223, 633, 645, 1183, 1677
Bso31I	GGTCTC	1 cut(s)	1512
BsoBI	CYCGRG	2 cut(s)	385, 1658
Bsp1286I	GDGCHC	1 cut(s)	346
Bsp143I	GATC	9 cut(s)	259, 300, 674, 786, 933, 1090, 1244, 1405, 1837
Bsp1720I	GCTNAGC	1 cut(s)	1109
BspACI	CCGC	2 cut(s)	1223, 1627
BspANI	GGCC	6 cut(s)	88, 223, 633, 645, 1183, 1677
BspCNI	CTCAG	5 cut(s)	301, 511, 1160, 1306, 2047
BspLI	GGNNCC	1 cut(s)	906
BspMI	ACCTGC	1 cut(s)	355
BspPI	GGATC	5 cut(s)	267, 781, 1098, 1400, 1832
BspTNI	GGTCTC	1 cut(s)	1512
BsrDI	GCAATG	1 cut(s)	1218
BsrI	ACTGG	2 cut(s)	224, 1969
BssECI	CCNNGG	1 cut(s)	117
BssMI	GATC	9 cut(s)	259, 300, 674, 786, 933, 1090, 1244, 1405, 1837
BssT1I	CCWWGG	1 cut(s)	117
Bst2UI	CCWGG	5 cut(s)	90, 443, 462, 791, 1798
Bst4CI	ACNGT	3 cut(s)	1010, 1032, 1058
Bst6I	CTCTTC	3 cut(s)	98, 1341, 1821
BstBAI	YACGTR	1 cut(s)	539
BstC8I	GCNNGC	2 cut(s)	606, 888
BstDEI	CTNAG	9 cut(s)	83, 288, 498, 1109, 1147, 1293, 1413, 1983, 2055
BstF5I	GGATG	7 cut(s)	483, 580, 784, 1130, 1552, 1702, 1873
BstH2I	RGCGCY	1 cut(s)	1617
BstHHI	GCGC	3 cut(s)	371, 536, 1616
BstKTI	GATC	9 cut(s)	262, 303, 677, 789, 936, 1093, 1247, 1408, 1840
BstMAI	GTCTC	3 cut(s)	1429, 1512, 1659
BstMBI	GATC	9 cut(s)	259, 300, 674, 786, 933, 1090, 1244, 1405, 1837
BstMWI	GCNNNNNNNGC	3 cut(s)	94, 1119, 1993
BstNI	CCWGG	5 cut(s)	90, 443, 462, 791, 1798
BstNSI	RCATGY	1 cut(s)	1796
BstSCI	CCNGG	6 cut(s)	88, 441, 460, 789, 1598, 1796
BstSFI	CTRYAG	1 cut(s)	157
BstV1I	GCAGC	2 cut(s)	4, 2005
BstV2I	GAAGAC	1 cut(s)	1426
BstX2I	RGATCY	4 cut(s)	259, 786, 1244, 1837
BstYI	RGATCY	4 cut(s)	259, 786, 1244, 1837
Bsu36I	CCTNAGG	2 cut(s)	83, 288
BsuI	GTATCC	1 cut(s)	176
BsuRI	GGCC	6 cut(s)	88, 223, 633, 645, 1183, 1677
BtsCI	GGATG	7 cut(s)	483, 580, 784, 1130, 1552, 1702, 1873
BtsIMutI	CAGTG	2 cut(s)	310, 1962
BveI	ACCTGC	1 cut(s)	355
Cac8I	GCNNGC	2 cut(s)	606, 888
CfoI	GCGC	3 cut(s)	371, 536, 1616
Cfr13I	GGNCC	2 cut(s)	928, 1181
CsiI	ACCWGGT	1 cut(s)	441
Csp6I	GTAC	1 cut(s)	1877
CviAII	CATG	8 cut(s)	68, 525, 647, 759, 1094, 1741, 1793, 1936
CviQI	GTAC	1 cut(s)	1877
DdeI	CTNAG	9 cut(s)	83, 288, 498, 1109, 1147, 1293, 1413, 1983, 2055
DpnI	GATC	9 cut(s)	261, 302, 676, 788, 935, 1092, 1246, 1407, 1839
DpnII	GATC	9 cut(s)	259, 300, 674, 786, 933, 1090, 1244, 1405, 1837
DrdI	GACNNNNNNGTC	1 cut(s)	1223
DseDI	GACNNNNNNGTC	1 cut(s)	1223
EaeI	YGGCCR	2 cut(s)	631, 643
Eam1104I	CTCTTC	3 cut(s)	98, 1341, 1821
EarI	CTCTTC	3 cut(s)	98, 1341, 1821
Eco130I	CCWWGG	1 cut(s)	117
Eco147I	AGGCCT	2 cut(s)	88, 1677
Eco31I	GGTCTC	1 cut(s)	1512
Eco32I	GATATC	2 cut(s)	1569, 1812
Eco47I	GGWCC	1 cut(s)	928
Eco72I	CACGTG	1 cut(s)	539
Eco81I	CCTNAGG	2 cut(s)	83, 288
Eco88I	CYCGRG	2 cut(s)	385, 1658
EcoRI	GAATTC	1 cut(s)	375
EcoRII	CCWGG	5 cut(s)	88, 441, 460, 789, 1796
EcoRV	GATATC	2 cut(s)	1569, 1812
EcoT14I	CCWWGG	1 cut(s)	117
ErhI	CCWWGG	1 cut(s)	117
FaeI	CATG	8 cut(s)	71, 528, 650, 762, 1097, 1744, 1796, 1939
FalI	AAGNNNNNCTT	2 cut(s)	1461, 1493
FaqI	GGGAC	2 cut(s)	653, 2033
FatI	CATG	8 cut(s)	67, 524, 646, 758, 1093, 1740, 1792, 1935
FbaI	TGATCA	1 cut(s)	300
Fnu4HI	GCNGC	2 cut(s)	18, 1994
FokI	GGATG	7 cut(s)	490, 587, 791, 1117, 1559, 1709, 1880
Fsp4HI	GCNGC	2 cut(s)	18, 1994
FspBI	CTAG	7 cut(s)	146, 549, 1497, 1530, 1587, 1787, 1974
GlaI	GCGC	3 cut(s)	370, 535, 1615
GluI	GCNGC	2 cut(s)	18, 1994
GsuI	CTGGAG	3 cut(s)	812, 1283, 1986
HaeII	RGCGCY	1 cut(s)	1617
HaeIII	GGCC	6 cut(s)	88, 223, 633, 645, 1183, 1677
HapII	CCGG	1 cut(s)	1599
HhaI	GCGC	3 cut(s)	371, 536, 1616
Hin1II	CATG	8 cut(s)	71, 528, 650, 762, 1097, 1744, 1796, 1939
Hin6I	GCGC	3 cut(s)	369, 534, 1614
HinP1I	GCGC	3 cut(s)	369, 534, 1614
HincII	GTYRAC	1 cut(s)	1686
HindII	GTYRAC	1 cut(s)	1686
HindIII	AAGCTT	2 cut(s)	568, 1160
HpaII	CCGG	1 cut(s)	1599
HphI	GGTGA	4 cut(s)	310, 312, 857, 1053
Hpy166II	GTNNAC	3 cut(s)	1061, 1686, 1979
Hpy8I	GTNNAC	3 cut(s)	1061, 1686, 1979
HpyAV	CCTTC	7 cut(s)	173, 401, 1081, 1163, 1405, 1451, 2061
HpyCH4III	ACNGT	3 cut(s)	1010, 1032, 1058
HpyCH4IV	ACGT	1 cut(s)	538
HpyF10VI	GCNNNNNNNGC	3 cut(s)	94, 1119, 1993
HpyF3I	CTNAG	9 cut(s)	83, 288, 498, 1109, 1147, 1293, 1413, 1983, 2055
HpySE526I	ACGT	1 cut(s)	538
Hsp92II	CATG	8 cut(s)	71, 528, 650, 762, 1097, 1744, 1796, 1939
HspAI	GCGC	3 cut(s)	369, 534, 1614
Ksp22I	TGATCA	1 cut(s)	300
Kzo9I	GATC	9 cut(s)	259, 300, 674, 786, 933, 1090, 1244, 1405, 1837
LmnI	GCTCC	4 cut(s)	341, 715, 1302, 1970
Lsp1109I	GCAGC	2 cut(s)	4, 2005
LweI	GCATC	3 cut(s)	1139, 1537, 1811
MabI	ACCWGGT	1 cut(s)	441
MaeI	CTAG	7 cut(s)	146, 549, 1497, 1530, 1587, 1787, 1974
MaeII	ACGT	1 cut(s)	538
MaeIII	GTNAC	6 cut(s)	539, 845, 965, 1026, 1052, 1199
MalI	GATC	9 cut(s)	261, 302, 676, 788, 935, 1092, 1246, 1407, 1839
MboI	GATC	9 cut(s)	259, 300, 674, 786, 933, 1090, 1244, 1405, 1837
MflI	RGATCY	4 cut(s)	259, 786, 1244, 1837
MhlI	GDGCHC	1 cut(s)	346
MlsI	TGGCCA	1 cut(s)	633
MluNI	TGGCCA	1 cut(s)	633
MlyI	GAGTC	5 cut(s)	377, 838, 1722, 1772, 2055
MmeI	TCCRAC	4 cut(s)	1401, 1433, 1704, 1865
MnlI	CCTC	7 cut(s)	297, 404, 1166, 1532, 1688, 1961, 2014
Mox20I	TGGCCA	1 cut(s)	633
MscI	TGGCCA	1 cut(s)	633
MseI	TTAA	7 cut(s)	566, 801, 1286, 1358, 1502, 2012, 2036
MslI	CAYNNNNRTG	1 cut(s)	609
Msp20I	TGGCCA	1 cut(s)	633
MspI	CCGG	1 cut(s)	1599
MspR9I	CCNGG	6 cut(s)	90, 443, 462, 791, 1600, 1798
Mva1269I	GAATGC	3 cut(s)	1335, 1753, 1884
MvaI	CCWGG	5 cut(s)	90, 443, 462, 791, 1798
MwoI	GCNNNNNNNGC	3 cut(s)	94, 1119, 1993
NciI	CCSGG	1 cut(s)	1600
NdeII	GATC	9 cut(s)	259, 300, 674, 786, 933, 1090, 1244, 1405, 1837
NlaIII	CATG	8 cut(s)	71, 528, 650, 762, 1097, 1744, 1796, 1939
NlaIV	GGNNCC	1 cut(s)	906
NmuCI	GTSAC	3 cut(s)	539, 845, 1026
NspI	RCATGY	1 cut(s)	1796
PaqCI	CACCTGC	1 cut(s)	355
PceI	AGGCCT	2 cut(s)	88, 1677
PctI	GAATGC	3 cut(s)	1335, 1753, 1884
PfeI	GAWTC	6 cut(s)	192, 987, 1391, 1590, 1853, 2059
PflMI	CCANNNNNTGG	1 cut(s)	256
PfoI	TCCNGGA	3 cut(s)	460, 789, 1598
PkrI	GCNGC	2 cut(s)	19, 1995
PleI	GAGTC	5 cut(s)	377, 837, 1721, 1771, 2054
PmaCI	CACGTG	1 cut(s)	539
PmlI	CACGTG	1 cut(s)	539
PpsI	GAGTC	5 cut(s)	377, 837, 1721, 1771, 2054
Ppu21I	YACGTR	1 cut(s)	539
PshBI	ATTAAT	1 cut(s)	1358
PsiI	TTATAA	1 cut(s)	1191
Psp6I	CCWGG	5 cut(s)	88, 441, 460, 789, 1796
PspCI	CACGTG	1 cut(s)	539
PspGI	CCWGG	5 cut(s)	88, 441, 460, 789, 1796
PspN4I	GGNNCC	1 cut(s)	906
PspPI	GGNCC	2 cut(s)	928, 1181
PsuI	RGATCY	4 cut(s)	259, 786, 1244, 1837
RsaI	GTAC	1 cut(s)	1878
RsaNI	GTAC	1 cut(s)	1877
RseI	CAYNNNNRTG	1 cut(s)	609
SaqAI	TTAA	7 cut(s)	566, 801, 1286, 1358, 1502, 2012, 2036
SatI	GCNGC	2 cut(s)	18, 1994
Sau3AI	GATC	9 cut(s)	259, 300, 674, 786, 933, 1090, 1244, 1405, 1837
Sau96I	GGNCC	2 cut(s)	928, 1181
SchI	GAGTC	5 cut(s)	377, 838, 1722, 1772, 2055
ScrFI	CCNGG	6 cut(s)	90, 443, 462, 791, 1600, 1798
SduI	GDGCHC	1 cut(s)	346
SexAI	ACCWGGT	1 cut(s)	441
SfaNI	GCATC	3 cut(s)	1139, 1537, 1811
SfcI	CTRYAG	1 cut(s)	157
SinI	GGWCC	1 cut(s)	928
SmiMI	CAYNNNNRTG	1 cut(s)	609
SmlI	CTYRAG	2 cut(s)	588, 1467
SmoI	CTYRAG	2 cut(s)	588, 1467
SpeI	ACTAGT	1 cut(s)	548
SseBI	AGGCCT	2 cut(s)	88, 1677
SsiI	CCGC	2 cut(s)	1223, 1627
SspI	AATATT	2 cut(s)	9, 1356
SspMI	CTAG	7 cut(s)	146, 549, 1497, 1530, 1587, 1787, 1974
StuI	AGGCCT	2 cut(s)	88, 1677
StyD4I	CCNGG	6 cut(s)	88, 441, 460, 789, 1598, 1796
StyI	CCWWGG	1 cut(s)	117
TaaI	ACNGT	3 cut(s)	1010, 1032, 1058
TaiI	ACGT	1 cut(s)	541
TaqI	TCGA	3 cut(s)	435, 1455, 1516
TatI	WGTACW	1 cut(s)	1876
TfiI	GAWTC	6 cut(s)	192, 987, 1391, 1590, 1853, 2059
Tru1I	TTAA	7 cut(s)	566, 801, 1286, 1358, 1502, 2012, 2036
Tru9I	TTAA	7 cut(s)	566, 801, 1286, 1358, 1502, 2012, 2036
TscAI	CASTG	2 cut(s)	310, 1969
TseFI	GTSAC	3 cut(s)	539, 845, 1026
TseI	GCWGC	2 cut(s)	17, 1993
Tsp45I	GTSAC	3 cut(s)	539, 845, 1026
TspGWI	ACGGA	1 cut(s)	354
TspRI	CASTG	2 cut(s)	310, 1969
Van91I	CCANNNNNTGG	1 cut(s)	256
VpaK11BI	GGWCC	1 cut(s)	928
VspI	ATTAAT	1 cut(s)	1358
XapI	RAATTY	4 cut(s)	316, 375, 978, 1801
XbaI	TCTAGA	1 cut(s)	1496
XceI	RCATGY	1 cut(s)	1796
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1384
XspI	CTAG	7 cut(s)	146, 549, 1497, 1530, 1587, 1787, 1974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.