RLG00000016003

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
3113607 .. 3116271
2665 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016003

Sequence Viewer

Length: 1965 bp
ATGAAAATATTGAGAGCTGCTTCTGTTTTCCTTTGTATATTCTTCTGCTTCTTTGTTTGCTCATCTCATGCAACAGATACCCTTAGGCCTGGTCAGTATTTGACGAGATATGAAACCTTGGTTTCTGATGGTGGAGTATTTGAGCTAGGATTTTTCTACAGTCCCACTAAGTCAGTTGAAGGATACTTGGGAATCTGGTTGAAGAATGACAAAAAGAAAAGGCCAGTTTGGGTGGCAAATAGAGATGACCATCTTATGGATCCCTATGCACTTCTCTACATCAACCCTCAGGGAATGGTGATCAGTGATAATAGAAATTCACCGTTTTTTTTCACTTATGGAGCAACTGCAACGACTAATAGGACAAGCGCAAGGATTCTTGACTCAGGAAACCTAATCCTGATGGAAGGAGGAAAGACGGTGTGGCAGAGCTTTGATGACCTGGTGGATACATTTCTTCCTGGAATGAAAATGGGGATGGTTAGCATAACCGATGCTCAGTTGAAGCCTATGTTTCTTTTATCATGGAAAAGCGCACATGACCCTACTCGTGGTTTTCTTGGTTTAAGCTTGGATAACAGCACAACTCAAGTCGATGTCTGGCACGATGATGGTAAAGAGAAACCAATTGGCCATTGGGACGGCCATGAGTTCAAATTTGTTTTCAAAACCCAATCAGATAATTACAATTTCAGCTATGTACTGAACAGCAAGGAGCGTTATCTTACTTTCAACAACAAAGAAAGTAATGTATATTCATGGTTTGCATTGGCTTCGGATGGTAAGATCCAGGAGTTCATGATGGTAGGACAGAAGATTTCGGTTGTGAGTCATTCGGTATGTGGTGACTGCTGGTTGGTGTCATCAAGAGATAGGAAGCTGTTGCTGGTCATCAAAGTTGTGGTTCCCTTGACTTTCTCCATTTTGATGTTGATCTTGTTCCTGTATTGTTTATGGAGAAAGCACAACTCTTTAGGAATTTACAGATTCTATATTGGCAGGACAGACAGTGTGAAGCTATTATTATCACAGTTGAGTTCTGATGATAGTGGTAGCAGTTCACCTGTTGGTAACTTACTGCAACATGACATTGCGGTCAAAAGGCTTTCGAAAAGATCTGGACAAGGATTAGCTGAGTTCAAGAATGAGGTGCAGTTAATATCTCAGCTCCAGCACAGAAATCTTGTTAAGATTTTGGGCTGTTGCATTCAACGAGAAGAAAAAATATTAATATACGAGTATATGTCCAACAAAAGTTTGGATTCCTTCATTTTTGATCCGATTAAGCGAAGACAACTGAATTGGAGACAGCGCATACACATAATCGAAGGGATTGCTCAAGGGCTTCTTTATCTTCACAAGTACTCTAGACTAAGAATTATTCATCGAGACCTCAAAACTAGCAACATCTTATTGGATGCCTATATGAACCCCAAGATTTCAGACTTTGGCTTGGCTAGAATCTTATCCGGGAATGAATGTGGGGCTGAAACAAAGCGGATTGTTGGAACATTCGGTTATATGTCTCCCGAGTATGTATTACAAGGCCTTTTGTCAACAAAATCGGATGTATTCAGCTTTGGAGTCATTGTGTTGGAGATTATGAGTGGCATGAAGAATGCAACCTTTTATGAGTCAGATTATTCTTTGAACTTGCTAGGACATGCCTGGAATTTATGGATATCTGGACGATGTGAAGAGATGATAGATCCAACATTAGCTGATTCAAGTTCAAGGGATGGTCTTGTACTCTGCATTCAGGTAGGTCTTTTATGCGTTCAAGATTGTGCCGAAGATAGACCAACCATGTCAGAAGTTGTTTCAATGTTGAGCACTGAAGGAGCTAGTTTACCTAAGCCAAAGCAGCCTATGTATTCTAACTTAATGTCAGAAGTAGATAAAGCTTTAAGAAGTGGAGTCCCTTCTGAGAATCTCTTGACATATTCATCAATTGTAGCAAGATAG

Protein Analysis

655

Amino Acids

74.13

Weight (kDa)

8.39

Isoelectric Point (pI)

44.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 177 1.1e-20 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 361 - 540 1.7e-40 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 362 - 606 2.1e-38 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0015514)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1094
AccB7I CCANNNNNTGG 1 cut(s) 256
AciI CCGC 2 cut(s) 1094, 1498
AclWI GGATC 5 cut(s) 254, 267, 781, 1271, 1703
AcoI YGGCCR 2 cut(s) 631, 643
AcsI RAATTY 4 cut(s) 316, 656, 978, 1672
AcuI CTGAAG 1 cut(s) 1857
AfaI GTAC 3 cut(s) 702, 1364, 1749
AfiI CCNNNNNNNGG 2 cut(s) 256, 551
AjnI CCWGG 5 cut(s) 88, 441, 460, 789, 1667
Alw21I GWGCWC 1 cut(s) 1835
Alw26I GTCTC 3 cut(s) 1300, 1383, 1530
AlwI GGATC 5 cut(s) 254, 267, 781, 1271, 1703
Ama87I CYCGRG 1 cut(s) 1529
AoxI GGCC 5 cut(s) 86, 221, 631, 643, 1546
ApeKI GCWGC 2 cut(s) 17, 1864
ApoI RAATTY 4 cut(s) 316, 656, 978, 1672
AseI ATTAAT 1 cut(s) 1229
AspLEI GCGC 3 cut(s) 371, 536, 1314
AsuC2I CCSGG 1 cut(s) 1471
AsuHPI GGTGA 4 cut(s) 310, 312, 857, 1053
AsuII TTCGAA 1 cut(s) 1109
AvaI CYCGRG 1 cut(s) 1529
AxyI CCTNAGG 2 cut(s) 83, 288
BalI TGGCCA 1 cut(s) 633
BamHI GGATCC 1 cut(s) 259
BauI CACGAG 1 cut(s) 549
BbsI GAAGAC 1 cut(s) 1297
Bbv12I GWGCWC 1 cut(s) 1835
BbvI GCAGC 2 cut(s) 4, 1876
BccI CCATC 8 cut(s) 122, 258, 397, 472, 605, 773, 796, 1733
BceAI ACGGC 1 cut(s) 658
BcgI CGANNNNNNTGC 4 cut(s) 756, 790, 1316, 1350
BciT130I CCWGG 5 cut(s) 90, 443, 462, 791, 1669
BciVI GTATCC 2 cut(s) 176, 442
BclI TGATCA 1 cut(s) 300
BcnI CCSGG 1 cut(s) 1471
BcoDI GTCTC 3 cut(s) 1300, 1383, 1530
BfaI CTAG 6 cut(s) 146, 1368, 1401, 1458, 1658, 1845
BfmI CTRYAG 1 cut(s) 157
BfuI GTATCC 2 cut(s) 176, 442
BglII AGATCT 1 cut(s) 1115
BisI GCNGC 2 cut(s) 18, 1865
BlsI GCNGC 2 cut(s) 19, 1866
BmcAI AGTACT 1 cut(s) 1364
Bme1390I CCNGG 6 cut(s) 90, 443, 462, 791, 1471, 1669
BmeT110I CYCGRG 1 cut(s) 1529
BmiI GGNNCC 2 cut(s) 261, 906
BmrFI CCNGG 6 cut(s) 90, 443, 462, 791, 1471, 1669
BmsI GCATC 2 cut(s) 484, 1408
BpiI GAAGAC 1 cut(s) 1297
BpmI CTGGAG 1 cut(s) 1154
Bpu10I CCTNAGC 1 cut(s) 1854
Bpu14I TTCGAA 1 cut(s) 1109
BpuEI CTTGAG 2 cut(s) 573, 1323
BpuMI CCSGG 1 cut(s) 1471
BsaBI GATNNNNATC 2 cut(s) 249, 932
BsaI GGTCTC 1 cut(s) 1383
BsaJI CCNNGG 1 cut(s) 117
BsaXI ACNNNNNCTCC 2 cut(s) 1575, 1605
Bsc4I CCNNNNNNNGG 2 cut(s) 256, 551
Bse1I ACTGG 1 cut(s) 224
Bse21I CCTNAGG 2 cut(s) 83, 288
Bse3DI GCAATG 1 cut(s) 1089
Bse8I GATNNNNATC 2 cut(s) 249, 932
BseBI CCWGG 5 cut(s) 90, 443, 462, 791, 1669
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 5 cut(s) 483, 784, 1423, 1573, 1744
BseJI GATNNNNATC 2 cut(s) 249, 932
BseLI CCNNNNNNNGG 2 cut(s) 256, 551
BseMI GCAATG 1 cut(s) 1089
BseMII CTCAG 6 cut(s) 302, 399, 512, 1125, 1178, 1917
BseNI ACTGG 1 cut(s) 224
BseXI GCAGC 2 cut(s) 4, 1876
BsgI GTGCAG 1 cut(s) 1172
BshFI GGCC 5 cut(s) 88, 223, 633, 645, 1548
BsiHKAI GWGCWC 1 cut(s) 1835
BsiHKCI CYCGRG 1 cut(s) 1529
BsiSI CCGG 1 cut(s) 1470
BslFI GGGAC 3 cut(s) 147, 653, 1904
BslI CCNNNNNNNGG 2 cut(s) 256, 551
BsmAI GTCTC 3 cut(s) 1300, 1383, 1530
BsmFI GGGAC 3 cut(s) 147, 653, 1904
BsmI GAATGC 3 cut(s) 1206, 1624, 1755
BsnI GGCC 5 cut(s) 88, 223, 633, 645, 1548
Bso31I GGTCTC 1 cut(s) 1383
BsoBI CYCGRG 1 cut(s) 1529
Bsp119I TTCGAA 1 cut(s) 1109
Bsp1286I GDGCHC 1 cut(s) 1835
Bsp143I GATC 7 cut(s) 259, 300, 786, 933, 1115, 1276, 1708
BspACI CCGC 2 cut(s) 1094, 1498
BspANI GGCC 5 cut(s) 88, 223, 633, 645, 1548
BspCNI CTCAG 6 cut(s) 301, 398, 511, 1126, 1177, 1918
BspHI TCATGA 1 cut(s) 798
BspLI GGNNCC 2 cut(s) 261, 906
BspPI GGATC 5 cut(s) 254, 267, 781, 1271, 1703
BspT104I TTCGAA 1 cut(s) 1109
BspTNI GGTCTC 1 cut(s) 1383
BsrDI GCAATG 1 cut(s) 1089
BsrI ACTGG 1 cut(s) 224
BssECI CCNNGG 1 cut(s) 117
BssMI GATC 7 cut(s) 259, 300, 786, 933, 1115, 1276, 1708
BssSI CACGAG 1 cut(s) 549
BssT1I CCWWGG 1 cut(s) 117
Bst2BI CACGAG 1 cut(s) 549
Bst2UI CCWGG 5 cut(s) 90, 443, 462, 791, 1669
Bst4CI ACNGT 5 cut(s) 161, 324, 421, 1010, 1032
Bst6I CTCTTC 1 cut(s) 1692
BstBI TTCGAA 1 cut(s) 1109
BstF5I GGATG 5 cut(s) 483, 784, 1423, 1573, 1744
BstHHI GCGC 3 cut(s) 371, 536, 1314
BstKTI GATC 7 cut(s) 262, 303, 789, 936, 1118, 1279, 1711
BstMAI GTCTC 3 cut(s) 1300, 1383, 1530
BstMBI GATC 7 cut(s) 259, 300, 786, 933, 1115, 1276, 1708
BstMWI GCNNNNNNNGC 1 cut(s) 1864
BstNI CCWGG 5 cut(s) 90, 443, 462, 791, 1669
BstNSI RCATGY 1 cut(s) 1667
BstSCI CCNGG 6 cut(s) 88, 441, 460, 789, 1469, 1667
BstSFI CTRYAG 1 cut(s) 157
BstV1I GCAGC 2 cut(s) 4, 1876
BstV2I GAAGAC 1 cut(s) 1297
BstX2I RGATCY 4 cut(s) 259, 786, 1115, 1708
BstYI RGATCY 4 cut(s) 259, 786, 1115, 1708
Bsu36I CCTNAGG 2 cut(s) 83, 288
BsuI GTATCC 2 cut(s) 176, 442
BsuRI GGCC 5 cut(s) 88, 223, 633, 645, 1548
BtsCI GGATG 5 cut(s) 483, 784, 1423, 1573, 1744
BtsIMutI CAGTG 3 cut(s) 310, 1015, 1833
CciI TCATGA 1 cut(s) 798
CfoI GCGC 3 cut(s) 371, 536, 1314
CsiI ACCWGGT 1 cut(s) 441
Csp6I GTAC 3 cut(s) 701, 1363, 1748
CviQI GTAC 3 cut(s) 701, 1363, 1748
DpnI GATC 7 cut(s) 261, 302, 788, 935, 1117, 1278, 1710
DpnII GATC 7 cut(s) 259, 300, 786, 933, 1115, 1276, 1708
DrdI GACNNNNNNGTC 1 cut(s) 1094
DseDI GACNNNNNNGTC 1 cut(s) 1094
EaeI YGGCCR 2 cut(s) 631, 643
Eam1104I CTCTTC 1 cut(s) 1692
EarI CTCTTC 1 cut(s) 1692
Eco130I CCWWGG 1 cut(s) 117
Eco147I AGGCCT 2 cut(s) 88, 1548
Eco31I GGTCTC 1 cut(s) 1383
Eco32I GATATC 1 cut(s) 1683
Eco57I CTGAAG 1 cut(s) 1857
Eco81I CCTNAGG 2 cut(s) 83, 288
Eco88I CYCGRG 1 cut(s) 1529
EcoRII CCWGG 5 cut(s) 88, 441, 460, 789, 1667
EcoRV GATATC 1 cut(s) 1683
EcoT14I CCWWGG 1 cut(s) 117
ErhI CCWWGG 1 cut(s) 117
FalI AAGNNNNNCTT 2 cut(s) 1332, 1364
FaqI GGGAC 3 cut(s) 147, 653, 1904
FbaI TGATCA 1 cut(s) 300
Fnu4HI GCNGC 2 cut(s) 18, 1865
FokI GGATG 5 cut(s) 490, 791, 1430, 1580, 1751
Fsp4HI GCNGC 2 cut(s) 18, 1865
FspBI CTAG 6 cut(s) 146, 1368, 1401, 1458, 1658, 1845
GlaI GCGC 3 cut(s) 370, 535, 1313
GluI GCNGC 2 cut(s) 18, 1865
GsuI CTGGAG 1 cut(s) 1154
HaeIII GGCC 5 cut(s) 88, 223, 633, 645, 1548
HapII CCGG 1 cut(s) 1470
HhaI GCGC 3 cut(s) 371, 536, 1314
Hin6I GCGC 3 cut(s) 369, 534, 1312
HinP1I GCGC 3 cut(s) 369, 534, 1312
HincII GTYRAC 1 cut(s) 1557
HindII GTYRAC 1 cut(s) 1557
HindIII AAGCTT 2 cut(s) 568, 1902
HpaII CCGG 1 cut(s) 1470
HphI GGTGA 4 cut(s) 310, 312, 857, 1053
Hpy166II GTNNAC 3 cut(s) 1061, 1557, 1850
Hpy8I GTNNAC 3 cut(s) 1061, 1557, 1850
HpyAV CCTTC 6 cut(s) 173, 401, 1276, 1322, 1832, 1932
HpyCH4III ACNGT 5 cut(s) 161, 324, 421, 1010, 1032
HpyCH4V TGCA 9 cut(s) 71, 269, 350, 767, 1081, 1153, 1206, 1622, 1755
HpyF10VI GCNNNNNNNGC 1 cut(s) 1864
HspAI GCGC 3 cut(s) 369, 534, 1312
Ksp22I TGATCA 1 cut(s) 300
Kzo9I GATC 7 cut(s) 259, 300, 786, 933, 1115, 1276, 1708
LmnI GCTCC 4 cut(s) 341, 715, 1173, 1841
Lsp1109I GCAGC 2 cut(s) 4, 1876
LweI GCATC 2 cut(s) 484, 1408
MabI ACCWGGT 1 cut(s) 441
MaeI CTAG 6 cut(s) 146, 1368, 1401, 1458, 1658, 1845
MaeIII GTNAC 2 cut(s) 845, 1070
MalI GATC 7 cut(s) 261, 302, 788, 935, 1117, 1278, 1710
MboI GATC 7 cut(s) 259, 300, 786, 933, 1115, 1276, 1708
MfeI CAATTG 2 cut(s) 627, 1950
MflI RGATCY 4 cut(s) 259, 786, 1115, 1708
MhlI GDGCHC 1 cut(s) 1835
MlsI TGGCCA 1 cut(s) 633
MluNI TGGCCA 1 cut(s) 633
MlyI GAGTC 5 cut(s) 377, 838, 1593, 1643, 1926
MmeI TCCRAC 4 cut(s) 1272, 1486, 1575, 1736
MnlI CCTC 4 cut(s) 297, 404, 1141, 1403
Mox20I TGGCCA 1 cut(s) 633
MscI TGGCCA 1 cut(s) 633
MseI TTAA 7 cut(s) 566, 1157, 1188, 1229, 1284, 1883, 1907
MslI CAYNNNNRTG 2 cut(s) 609, 926
Msp20I TGGCCA 1 cut(s) 633
MspI CCGG 1 cut(s) 1470
MspR9I CCNGG 6 cut(s) 90, 443, 462, 791, 1471, 1669
MunI CAATTG 2 cut(s) 627, 1950
Mva1269I GAATGC 3 cut(s) 1206, 1624, 1755
MvaI CCWGG 5 cut(s) 90, 443, 462, 791, 1669
MwoI GCNNNNNNNGC 1 cut(s) 1864
NciI CCSGG 1 cut(s) 1471
NdeII GATC 7 cut(s) 259, 300, 786, 933, 1115, 1276, 1708
NlaIV GGNNCC 2 cut(s) 261, 906
NmuCI GTSAC 1 cut(s) 845
NspI RCATGY 1 cut(s) 1667
NspV TTCGAA 1 cut(s) 1109
PagI TCATGA 1 cut(s) 798
PceI AGGCCT 2 cut(s) 88, 1548
PctI GAATGC 3 cut(s) 1206, 1624, 1755
PfeI GAWTC 7 cut(s) 192, 376, 987, 1262, 1461, 1724, 1930
PflMI CCANNNNNTGG 1 cut(s) 256
PfoI TCCNGGA 3 cut(s) 460, 789, 1469
PkrI GCNGC 2 cut(s) 19, 1866
PleI GAGTC 5 cut(s) 377, 837, 1592, 1642, 1925
PpsI GAGTC 5 cut(s) 377, 837, 1592, 1642, 1925
PshBI ATTAAT 1 cut(s) 1229
Psp6I CCWGG 5 cut(s) 88, 441, 460, 789, 1667
PspGI CCWGG 5 cut(s) 88, 441, 460, 789, 1667
PspN4I GGNNCC 2 cut(s) 261, 906
PsuI RGATCY 4 cut(s) 259, 786, 1115, 1708
RsaI GTAC 3 cut(s) 702, 1364, 1749
RsaNI GTAC 3 cut(s) 701, 1363, 1748
RseI CAYNNNNRTG 2 cut(s) 609, 926
SaqAI TTAA 7 cut(s) 566, 1157, 1188, 1229, 1284, 1883, 1907
SatI GCNGC 2 cut(s) 18, 1865
Sau3AI GATC 7 cut(s) 259, 300, 786, 933, 1115, 1276, 1708
ScaI AGTACT 1 cut(s) 1364
SchI GAGTC 5 cut(s) 377, 838, 1593, 1643, 1926
ScrFI CCNGG 6 cut(s) 90, 443, 462, 791, 1471, 1669
SduI GDGCHC 1 cut(s) 1835
SexAI ACCWGGT 1 cut(s) 441
SfaNI GCATC 2 cut(s) 484, 1408
SfcI CTRYAG 1 cut(s) 157
SfuI TTCGAA 1 cut(s) 1109
SmiMI CAYNNNNRTG 2 cut(s) 609, 926
SmlI CTYRAG 2 cut(s) 588, 1338
SmoI CTYRAG 2 cut(s) 588, 1338
SseBI AGGCCT 2 cut(s) 88, 1548
SsiI CCGC 2 cut(s) 1094, 1498
SspI AATATT 2 cut(s) 9, 1227
SspMI CTAG 6 cut(s) 146, 1368, 1401, 1458, 1658, 1845
StuI AGGCCT 2 cut(s) 88, 1548
StyD4I CCNGG 6 cut(s) 88, 441, 460, 789, 1469, 1667
StyI CCWWGG 1 cut(s) 117
TaaI ACNGT 5 cut(s) 161, 324, 421, 1010, 1032
TaqI TCGA 4 cut(s) 594, 1109, 1326, 1387
TatI WGTACW 3 cut(s) 700, 1362, 1747
TfiI GAWTC 7 cut(s) 192, 376, 987, 1262, 1461, 1724, 1930
Tru1I TTAA 7 cut(s) 566, 1157, 1188, 1229, 1284, 1883, 1907
Tru9I TTAA 7 cut(s) 566, 1157, 1188, 1229, 1284, 1883, 1907
TscAI CASTG 3 cut(s) 310, 1015, 1840
TseFI GTSAC 1 cut(s) 845
TseI GCWGC 2 cut(s) 17, 1864
Tsp45I GTSAC 1 cut(s) 845
TspRI CASTG 3 cut(s) 310, 1015, 1840
Van91I CCANNNNNTGG 1 cut(s) 256
VspI ATTAAT 1 cut(s) 1229
XapI RAATTY 4 cut(s) 316, 656, 978, 1672
XbaI TCTAGA 1 cut(s) 1367
XceI RCATGY 1 cut(s) 1667
XcmI CCANNNNNNNNNTGG 2 cut(s) 633, 1255
XspI CTAG 6 cut(s) 146, 1368, 1401, 1458, 1658, 1845
ZrmI AGTACT 1 cut(s) 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.