Pectinesterase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20860 AT5G20860 |
| fragaria_vesca | FvH4_1g09560 |
| malus_domestica | MD02G1104200.v1.1 |
| prunus_persica | Prupe.7G190700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0096331 RchiOBHm_Chr2g0096371 |
| rosa_laevigata | RLG00000016634 RLG00000016637 |
| rosa_multiflora | Rmu_sc0004244.1_g000006 Rmu_sc0005996.1_g000024 Rmu_sc0005996.1_g000034 |
| rosa_roxburghii | Rroxscaffold_2G00145670 |
| rosa_rugosa | Rorug02G0057600 Rorug02G0057700 Rorug02G0057700 |
| rosa_samantha | Rh2AG104500 Rh2BG106600 Rh2CG108500 Rh2DG107400 |
| rosa_wichuraiana | Rw2G008050 Rw2G008060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 465 |
| AccI | GTMKAC | 1 cut(s) | 177 |
| AccII | CGCG | 1 cut(s) | 279 |
| AciI | CCGC | 9 cut(s) | 96, 132, 455, 751, 810, 813, 844, 879, 1112 |
| AclWI | GGATC | 1 cut(s) | 388 |
| AcoI | YGGCCR | 1 cut(s) | 1163 |
| AcuI | CTGAAG | 3 cut(s) | 320, 408, 1101 |
| AfaI | GTAC | 2 cut(s) | 674, 1205 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 894, 1059, 1139, 1250 |
| AgsI | TTSAA | 3 cut(s) | 16, 61, 525 |
| AjnI | CCWGG | 6 cut(s) | 571, 870, 1072, 1088, 1132, 1165 |
| AluBI | AGCT | 8 cut(s) | 41, 159, 422, 581, 614, 668, 1085, 1187 |
| AluI | AGCT | 8 cut(s) | 41, 159, 422, 581, 614, 668, 1085, 1187 |
| AlwI | GGATC | 1 cut(s) | 388 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 647 |
| Ama87I | CYCGRG | 3 cut(s) | 615, 892, 938 |
| AoxI | GGCC | 8 cut(s) | 142, 643, 989, 999, 1070, 1146, 1163, 1270 |
| ApeKI | GCWGC | 2 cut(s) | 419, 783 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 782, 814 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 520 |
| AspLEI | GCGC | 3 cut(s) | 21, 192, 262 |
| AspS9I | GGNCC | 5 cut(s) | 644, 885, 1063, 1130, 1147 |
| AsuC2I | CCSGG | 5 cut(s) | 893, 894, 939, 940, 1053 |
| AsuHPI | GGTGA | 3 cut(s) | 1030, 1049, 1168 |
| AvaI | CYCGRG | 3 cut(s) | 615, 892, 938 |
| AvaII | GGWCC | 3 cut(s) | 885, 1063, 1130 |
| BalI | TGGCCA | 1 cut(s) | 1165 |
| BbsI | GAAGAC | 1 cut(s) | 811 |
| BbvCI | CCTCAGC | 1 cut(s) | 146 |
| BbvI | GCAGC | 2 cut(s) | 431, 795 |
| BccI | CCATC | 5 cut(s) | 371, 485, 506, 596, 644 |
| BceAI | ACGGC | 3 cut(s) | 157, 800, 998 |
| BciT130I | CCWGG | 6 cut(s) | 573, 872, 1074, 1090, 1134, 1167 |
| BclI | TGATCA | 1 cut(s) | 685 |
| BcnI | CCSGG | 5 cut(s) | 893, 894, 939, 940, 1053 |
| BfaI | CTAG | 4 cut(s) | 23, 156, 546, 1008 |
| BfmI | CTRYAG | 5 cut(s) | 700, 760, 925, 970, 1209 |
| BfoI | RGCGCY | 1 cut(s) | 22 |
| BisI | GCNGC | 6 cut(s) | 96, 132, 420, 784, 810, 813 |
| BlpI | GCTNAGC | 1 cut(s) | 577 |
| BlsI | GCNGC | 6 cut(s) | 97, 133, 421, 785, 811, 814 |
| Bme18I | GGWCC | 3 cut(s) | 885, 1063, 1130 |
| BmeT110I | CYCGRG | 3 cut(s) | 615, 892, 938 |
| BmgT120I | GGNCC | 5 cut(s) | 644, 885, 1063, 1130, 1147 |
| BmiI | GGNNCC | 2 cut(s) | 1064, 1131 |
| BmrI | ACTGGG | 1 cut(s) | 546 |
| BmsI | GCATC | 1 cut(s) | 1011 |
| BmuI | ACTGGG | 1 cut(s) | 546 |
| BpiI | GAAGAC | 1 cut(s) | 811 |
| BpmI | CTGGAG | 1 cut(s) | 1161 |
| Bpu10I | CCTNAGC | 2 cut(s) | 146, 664 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 577 |
| BpuEI | CTTGAG | 2 cut(s) | 29, 1079 |
| BpuMI | CCSGG | 5 cut(s) | 893, 894, 939, 940, 1053 |
| BsaJI | CCNNGG | 9 cut(s) | 139, 892, 893, 938, 992, 1014, 1073, 1133, 1166 |
| BsaWI | WCCGGW | 1 cut(s) | 324 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 732, 762 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 894, 1059, 1139, 1250 |
| Bse118I | RCCGGY | 1 cut(s) | 1250 |
| Bse1I | ACTGG | 2 cut(s) | 541, 1066 |
| BseBI | CCWGG | 6 cut(s) | 573, 872, 1074, 1090, 1134, 1167 |
| BseDI | CCNNGG | 9 cut(s) | 139, 892, 893, 938, 992, 1014, 1073, 1133, 1166 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 894, 1059, 1139, 1250 |
| BseMII | CTCAG | 5 cut(s) | 160, 184, 221, 591, 705 |
| BseNI | ACTGG | 2 cut(s) | 541, 1066 |
| BseXI | GCAGC | 2 cut(s) | 431, 795 |
| BseYI | CCCAGC | 1 cut(s) | 1059 |
| Bsh1236I | CGCG | 1 cut(s) | 279 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1251 |
| BshFI | GGCC | 8 cut(s) | 144, 645, 991, 1001, 1072, 1148, 1165, 1272 |
| BsiEI | CGRYCG | 1 cut(s) | 1251 |
| BsiHKCI | CYCGRG | 3 cut(s) | 615, 892, 938 |
| BsiSI | CCGG | 6 cut(s) | 325, 893, 939, 1053, 1251, 1269 |
| BslFI | GGGAC | 1 cut(s) | 1143 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 894, 1059, 1139, 1250 |
| BsmFI | GGGAC | 1 cut(s) | 1143 |
| BsnI | GGCC | 8 cut(s) | 144, 645, 991, 1001, 1072, 1148, 1165, 1272 |
| BsoBI | CYCGRG | 3 cut(s) | 615, 892, 938 |
| Bsp1407I | TGTACA | 1 cut(s) | 672 |
| Bsp143I | GATC | 2 cut(s) | 380, 685 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 577 |
| Bsp19I | CCATGG | 1 cut(s) | 992 |
| Bsp68I | TCGCGA | 1 cut(s) | 279 |
| BspACI | CCGC | 9 cut(s) | 96, 132, 455, 751, 810, 813, 844, 879, 1112 |
| BspANI | GGCC | 8 cut(s) | 144, 645, 991, 1001, 1072, 1148, 1165, 1272 |
| BspCNI | CTCAG | 5 cut(s) | 159, 183, 220, 590, 704 |
| BspFNI | CGCG | 1 cut(s) | 279 |
| BspLI | GGNNCC | 2 cut(s) | 1064, 1131 |
| BspPI | GGATC | 1 cut(s) | 388 |
| BsrFI | RCCGGY | 1 cut(s) | 1250 |
| BsrGI | TGTACA | 1 cut(s) | 672 |
| BsrI | ACTGG | 2 cut(s) | 541, 1066 |
| BssAI | RCCGGY | 1 cut(s) | 1250 |
| BssECI | CCNNGG | 9 cut(s) | 139, 892, 893, 938, 992, 1014, 1073, 1133, 1166 |
| BssMI | GATC | 2 cut(s) | 380, 685 |
| BssT1I | CCWWGG | 1 cut(s) | 992 |
| Bst2UI | CCWGG | 6 cut(s) | 573, 872, 1074, 1090, 1134, 1167 |
| Bst4CI | ACNGT | 7 cut(s) | 242, 349, 400, 592, 926, 974, 1210 |
| Bst6I | CTCTTC | 1 cut(s) | 685 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 368 |
| BstAUI | TGTACA | 1 cut(s) | 672 |
| BstC8I | GCNNGC | 3 cut(s) | 643, 848, 877 |
| BstDEI | CTNAG | 7 cut(s) | 89, 146, 170, 207, 577, 664, 691 |
| BstDSI | CCRYGG | 3 cut(s) | 139, 992, 1014 |
| BstFNI | CGCG | 1 cut(s) | 279 |
| BstH2I | RGCGCY | 1 cut(s) | 22 |
| BstHHI | GCGC | 3 cut(s) | 21, 192, 262 |
| BstKTI | GATC | 2 cut(s) | 383, 688 |
| BstMBI | GATC | 2 cut(s) | 380, 685 |
| BstMCI | CGRYCG | 1 cut(s) | 1251 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 156, 368, 416, 560, 717, 1118, 1145, 1193 |
| BstNI | CCWGG | 6 cut(s) | 573, 872, 1074, 1090, 1134, 1167 |
| BstSFI | CTRYAG | 5 cut(s) | 700, 760, 925, 970, 1209 |
| BstUI | CGCG | 1 cut(s) | 279 |
| BstV1I | GCAGC | 2 cut(s) | 431, 795 |
| BstV2I | GAAGAC | 1 cut(s) | 811 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1073 |
| BsuRI | GGCC | 8 cut(s) | 144, 645, 991, 1001, 1072, 1148, 1165, 1272 |
| BtgI | CCRYGG | 3 cut(s) | 139, 992, 1014 |
| BtsI | GCAGTG | 1 cut(s) | 369 |
| BtsIMutI | CAGTG | 4 cut(s) | 369, 588, 1073, 1206 |
| BtuMI | TCGCGA | 1 cut(s) | 279 |
| Cac8I | GCNNGC | 3 cut(s) | 643, 848, 877 |
| CaiI | CAGNNNCTG | 1 cut(s) | 647 |
| CfoI | GCGC | 3 cut(s) | 21, 192, 262 |
| Cfr10I | RCCGGY | 1 cut(s) | 1250 |
| Cfr13I | GGNCC | 5 cut(s) | 644, 885, 1063, 1130, 1147 |
| Cfr9I | CCCGGG | 2 cut(s) | 892, 938 |
| CseI | GACGC | 1 cut(s) | 538 |
| Csp6I | GTAC | 2 cut(s) | 673, 1204 |
| CviAII | CATG | 7 cut(s) | 7, 84, 110, 779, 993, 1175, 1236 |
| CviQI | GTAC | 2 cut(s) | 673, 1204 |
| DdeI | CTNAG | 7 cut(s) | 89, 146, 170, 207, 577, 664, 691 |
| DpnI | GATC | 2 cut(s) | 382, 687 |
| DpnII | GATC | 2 cut(s) | 380, 685 |
| EaeI | YGGCCR | 1 cut(s) | 1163 |
| Eam1104I | CTCTTC | 1 cut(s) | 685 |
| EarI | CTCTTC | 1 cut(s) | 685 |
| EciI | GGCGGA | 1 cut(s) | 740 |
| Eco130I | CCWWGG | 1 cut(s) | 992 |
| Eco147I | AGGCCT | 1 cut(s) | 1001 |
| Eco47I | GGWCC | 3 cut(s) | 885, 1063, 1130 |
| Eco57I | CTGAAG | 3 cut(s) | 320, 408, 1101 |
| Eco88I | CYCGRG | 3 cut(s) | 615, 892, 938 |
| EcoO109I | RGGNCCY | 2 cut(s) | 644, 1130 |
| EcoRII | CCWGG | 6 cut(s) | 571, 870, 1072, 1088, 1132, 1165 |
| EcoT14I | CCWWGG | 1 cut(s) | 992 |
| ErhI | CCWWGG | 1 cut(s) | 992 |
| FaeI | CATG | 7 cut(s) | 10, 87, 113, 782, 996, 1178, 1239 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 893, 925 |
| FaqI | GGGAC | 1 cut(s) | 1143 |
| FatI | CATG | 7 cut(s) | 6, 83, 109, 778, 992, 1174, 1235 |
| FauI | CCCGC | 2 cut(s) | 448, 872 |
| FbaI | TGATCA | 1 cut(s) | 685 |
| FblI | GTMKAC | 1 cut(s) | 177 |
| Fnu4HI | GCNGC | 6 cut(s) | 96, 132, 420, 784, 810, 813 |
| Fsp4HI | GCNGC | 6 cut(s) | 96, 132, 420, 784, 810, 813 |
| FspBI | CTAG | 4 cut(s) | 23, 156, 546, 1008 |
| GlaI | GCGC | 3 cut(s) | 20, 191, 261 |
| GluI | GCNGC | 6 cut(s) | 96, 132, 420, 784, 810, 813 |
| GsaI | CCCAGC | 1 cut(s) | 1063 |
| GsuI | CTGGAG | 1 cut(s) | 1161 |
| HaeII | RGCGCY | 1 cut(s) | 22 |
| HaeIII | GGCC | 8 cut(s) | 144, 645, 991, 1001, 1072, 1148, 1165, 1272 |
| HapII | CCGG | 6 cut(s) | 325, 893, 939, 1053, 1251, 1269 |
| HgaI | GACGC | 1 cut(s) | 538 |
| HhaI | GCGC | 3 cut(s) | 21, 192, 262 |
| Hin1II | CATG | 7 cut(s) | 10, 87, 113, 782, 996, 1178, 1239 |
| Hin6I | GCGC | 3 cut(s) | 19, 190, 260 |
| HinP1I | GCGC | 3 cut(s) | 19, 190, 260 |
| HincII | GTYRAC | 2 cut(s) | 178, 238 |
| HindII | GTYRAC | 2 cut(s) | 178, 238 |
| HindIII | AAGCTT | 1 cut(s) | 1083 |
| HinfI | GANTC | 4 cut(s) | 166, 542, 606, 931 |
| HpaII | CCGG | 6 cut(s) | 325, 893, 939, 1053, 1251, 1269 |
| HphI | GGTGA | 3 cut(s) | 1030, 1049, 1168 |
| Hpy166II | GTNNAC | 3 cut(s) | 178, 238, 1206 |
| Hpy188I | TCNGA | 6 cut(s) | 163, 406, 685, 803, 889, 946 |
| Hpy188III | TCNNGA | 5 cut(s) | 46, 278, 617, 823, 919 |
| Hpy8I | GTNNAC | 3 cut(s) | 178, 238, 1206 |
| Hpy99I | CGWCG | 1 cut(s) | 554 |
| HpyAV | CCTTC | 3 cut(s) | 445, 991, 1254 |
| HpyCH4III | ACNGT | 7 cut(s) | 242, 349, 400, 592, 926, 974, 1210 |
| HpyCH4IV | ACGT | 4 cut(s) | 116, 500, 1041, 1125 |
| HpyCH4V | TGCA | 4 cut(s) | 120, 371, 831, 1024 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 156, 368, 416, 560, 717, 1118, 1145, 1193 |
| HpyF3I | CTNAG | 7 cut(s) | 89, 146, 170, 207, 577, 664, 691 |
| HpySE526I | ACGT | 4 cut(s) | 116, 500, 1041, 1125 |
| Hsp92II | CATG | 7 cut(s) | 10, 87, 113, 782, 996, 1178, 1239 |
| HspAI | GCGC | 3 cut(s) | 19, 190, 260 |
| Ksp22I | TGATCA | 1 cut(s) | 685 |
| Kzo9I | GATC | 2 cut(s) | 380, 685 |
| LmnI | GCTCC | 3 cut(s) | 164, 1054, 1184 |
| Lsp1109I | GCAGC | 2 cut(s) | 431, 795 |
| LweI | GCATC | 1 cut(s) | 1011 |
| MaeI | CTAG | 4 cut(s) | 23, 156, 546, 1008 |
| MaeII | ACGT | 4 cut(s) | 116, 500, 1041, 1125 |
| MaeIII | GTNAC | 7 cut(s) | 244, 592, 770, 1037, 1098, 1214, 1255 |
| MalI | GATC | 2 cut(s) | 382, 687 |
| MboI | GATC | 2 cut(s) | 380, 685 |
| MboII | GAAGA | 6 cut(s) | 277, 331, 672, 790, 811, 832 |
| MlsI | TGGCCA | 1 cut(s) | 1165 |
| MluCI | AATT | 2 cut(s) | 273, 755 |
| MluNI | TGGCCA | 1 cut(s) | 1165 |
| MmeI | TCCRAC | 3 cut(s) | 384, 912, 1053 |
| Mox20I | TGGCCA | 1 cut(s) | 1165 |
| MroXI | GAANNNNTTC | 1 cut(s) | 520 |
| MscI | TGGCCA | 1 cut(s) | 1165 |
| MseI | TTAA | 2 cut(s) | 477, 960 |
| Msp20I | TGGCCA | 1 cut(s) | 1165 |
| MspI | CCGG | 6 cut(s) | 325, 893, 939, 1053, 1251, 1269 |
| MvaI | CCWGG | 6 cut(s) | 573, 872, 1074, 1090, 1134, 1167 |
| MvnI | CGCG | 1 cut(s) | 279 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 156, 368, 416, 560, 717, 1118, 1145, 1193 |
| NciI | CCSGG | 5 cut(s) | 893, 894, 939, 940, 1053 |
| NcoI | CCATGG | 1 cut(s) | 992 |
| NdeII | GATC | 2 cut(s) | 380, 685 |
| NlaIII | CATG | 7 cut(s) | 10, 87, 113, 782, 996, 1178, 1239 |
| NlaIV | GGNNCC | 2 cut(s) | 1064, 1131 |
| NmuCI | GTSAC | 4 cut(s) | 770, 1037, 1098, 1255 |
| NruI | TCGCGA | 1 cut(s) | 279 |
| PaeR7I | CTCGAG | 1 cut(s) | 615 |
| PceI | AGGCCT | 1 cut(s) | 1001 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 813, 1011 |
| PdmI | GAANNNNTTC | 1 cut(s) | 520 |
| PfeI | GAWTC | 4 cut(s) | 166, 542, 606, 931 |
| PflFI | GACNNNGTC | 2 cut(s) | 7, 400 |
| PkrI | GCNGC | 6 cut(s) | 97, 133, 421, 785, 811, 814 |
| PpuMI | RGGWCCY | 1 cut(s) | 1130 |
| PsiI | TTATAA | 1 cut(s) | 465 |
| Psp5II | RGGWCCY | 1 cut(s) | 1130 |
| Psp6I | CCWGG | 6 cut(s) | 571, 870, 1072, 1088, 1132, 1165 |
| PspFI | CCCAGC | 1 cut(s) | 1059 |
| PspGI | CCWGG | 6 cut(s) | 571, 870, 1072, 1088, 1132, 1165 |
| PspN4I | GGNNCC | 2 cut(s) | 1064, 1131 |
| PspPI | GGNCC | 5 cut(s) | 644, 885, 1063, 1130, 1147 |
| PspPPI | RGGWCCY | 1 cut(s) | 1130 |
| PstNI | CAGNNNCTG | 1 cut(s) | 647 |
| PsyI | GACNNNGTC | 2 cut(s) | 7, 400 |
| RruI | TCGCGA | 1 cut(s) | 279 |
| RsaI | GTAC | 2 cut(s) | 674, 1205 |
| RsaNI | GTAC | 2 cut(s) | 673, 1204 |
| SalI | GTCGAC | 1 cut(s) | 176 |
| SaqAI | TTAA | 2 cut(s) | 477, 960 |
| SatI | GCNGC | 6 cut(s) | 96, 132, 420, 784, 810, 813 |
| Sau3AI | GATC | 2 cut(s) | 380, 685 |
| Sau96I | GGNCC | 5 cut(s) | 644, 885, 1063, 1130, 1147 |
| SfaNI | GCATC | 1 cut(s) | 1011 |
| SfcI | CTRYAG | 5 cut(s) | 700, 760, 925, 970, 1209 |
| Sfr274I | CTCGAG | 1 cut(s) | 615 |
| SinI | GGWCC | 3 cut(s) | 885, 1063, 1130 |
| SlaI | CTCGAG | 1 cut(s) | 615 |
| SmaI | CCCGGG | 2 cut(s) | 894, 940 |
| SmlI | CTYRAG | 3 cut(s) | 44, 615, 1094 |
| SmoI | CTYRAG | 3 cut(s) | 44, 615, 1094 |
| Sse9I | AATT | 2 cut(s) | 273, 755 |
| SseBI | AGGCCT | 1 cut(s) | 1001 |
| SsiI | CCGC | 9 cut(s) | 96, 132, 455, 751, 810, 813, 844, 879, 1112 |
| SspMI | CTAG | 4 cut(s) | 23, 156, 546, 1008 |
| StuI | AGGCCT | 1 cut(s) | 1001 |
| StyI | CCWWGG | 1 cut(s) | 992 |
| TaaI | ACNGT | 7 cut(s) | 242, 349, 400, 592, 926, 974, 1210 |
| TaiI | ACGT | 4 cut(s) | 119, 503, 1044, 1128 |
| TaqI | TCGA | 4 cut(s) | 177, 616, 789, 1247 |
| TasI | AATT | 2 cut(s) | 273, 755 |
| TatI | WGTACW | 2 cut(s) | 672, 1203 |
| TauI | GCSGC | 4 cut(s) | 98, 134, 812, 815 |
| TfiI | GAWTC | 4 cut(s) | 166, 542, 606, 931 |
| Tru1I | TTAA | 2 cut(s) | 477, 960 |
| Tru9I | TTAA | 2 cut(s) | 477, 960 |
| TscAI | CASTG | 4 cut(s) | 369, 595, 1073, 1213 |
| TseFI | GTSAC | 4 cut(s) | 770, 1037, 1098, 1255 |
| TseI | GCWGC | 2 cut(s) | 419, 783 |
| Tsp45I | GTSAC | 4 cut(s) | 770, 1037, 1098, 1255 |
| TspDTI | ATGAA | 6 cut(s) | 126, 598, 767, 784, 1163, 1224 |
| TspGWI | ACGGA | 2 cut(s) | 904, 1265 |
| TspMI | CCCGGG | 2 cut(s) | 892, 938 |
| TspRI | CASTG | 4 cut(s) | 369, 595, 1073, 1213 |
| Tth111I | GACNNNGTC | 2 cut(s) | 7, 400 |
| VpaK11BI | GGWCC | 3 cut(s) | 885, 1063, 1130 |
| XhoI | CTCGAG | 1 cut(s) | 615 |
| XmaI | CCCGGG | 2 cut(s) | 892, 938 |
| XmiI | GTMKAC | 1 cut(s) | 177 |
| XmnI | GAANNNNTTC | 1 cut(s) | 520 |
| XspI | CTAG | 4 cut(s) | 23, 156, 546, 1008 |