RchiOBHm_Chr2g0135791

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
53019946 .. 53020476
531 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50664

Sequence Viewer

Length: 198 bp
ATGGCGGTTGTTTATGAGGTGGTTACGAGATTCTCGGGATTCTCTGTAGCCCGACGGGTTGGGCGATATAGGTGGTTAGGGGTTGGGCCCTTTAGGCTCAAGGAGGTCATTCTGGATTACAGACCCGTAATTGGTTTAGGTTTTAGGGAGGAGAGTGGGGAGTTCTTGTCCACCACTGGTCATTCCCATATTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

65

Amino Acids

7.43

Weight (kDa)

9.97

Isoelectric Point (pI)

41.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 5
AfiI CCNNNNNNNGG 1 cut(s) 131
Ama87I CYCGRG 1 cut(s) 34
AoxI GGCC 1 cut(s) 86
ApaI GGGCCC 1 cut(s) 90
AspS9I GGNCC 2 cut(s) 86, 87
AvaI CYCGRG 1 cut(s) 34
BaeGI GKGCMC 1 cut(s) 90
BanII GRGCYC 1 cut(s) 90
BfmI CTRYAG 1 cut(s) 45
BglI GCCNNNNNGGC 1 cut(s) 94
BmeT110I CYCGRG 1 cut(s) 34
BmgT120I GGNCC 2 cut(s) 86, 87
BmiI GGNNCC 1 cut(s) 88
BpuEI CTTGAG 1 cut(s) 83
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bsc4I CCNNNNNNNGG 1 cut(s) 131
Bse1I ACTGG 1 cut(s) 181
BseLI CCNNNNNNNGG 1 cut(s) 131
BseNI ACTGG 1 cut(s) 181
BseRI GAGGAG 1 cut(s) 164
BseSI GKGCMC 1 cut(s) 90
BshFI GGCC 1 cut(s) 88
BsiHKCI CYCGRG 1 cut(s) 34
BslI CCNNNNNNNGG 1 cut(s) 131
BsnI GGCC 1 cut(s) 88
BsoBI CYCGRG 1 cut(s) 34
Bsp120I GGGCCC 1 cut(s) 86
Bsp1286I GDGCHC 1 cut(s) 90
BspACI CCGC 1 cut(s) 5
BspANI GGCC 1 cut(s) 88
BspLI GGNNCC 1 cut(s) 88
BsrI ACTGG 1 cut(s) 181
BstMWI GCNNNNNNNGC 1 cut(s) 94
BstSFI CTRYAG 1 cut(s) 45
BstSLI GKGCMC 1 cut(s) 90
BsuRI GGCC 1 cut(s) 88
BtsIMutI CAGTG 1 cut(s) 174
Cfr13I GGNCC 2 cut(s) 86, 87
CviJI RGCY 3 cut(s) 50, 88, 97
CviKI_1 RGCY 3 cut(s) 50, 88, 97
Eco24I GRGCYC 1 cut(s) 90
Eco88I CYCGRG 1 cut(s) 34
EcoO109I RGGNCCY 1 cut(s) 87
EcoT38I GRGCYC 1 cut(s) 90
FaiI YATR 4 cut(s) 15, 69, 189, 194
FriOI GRGCYC 1 cut(s) 90
HaeIII GGCC 1 cut(s) 88
HinfI GANTC 2 cut(s) 30, 39
Hpy166II GTNNAC 1 cut(s) 171
Hpy188III TCNNGA 2 cut(s) 36, 113
Hpy8I GTNNAC 1 cut(s) 171
Hpy99I CGWCG 1 cut(s) 57
HpyF10VI GCNNNNNNNGC 1 cut(s) 94
LpnPI CCDG 2 cut(s) 98, 162
MaeIII GTNAC 1 cut(s) 22
MhlI GDGCHC 1 cut(s) 90
MluCI AATT 1 cut(s) 129
MnlI CCTC 3 cut(s) 10, 97, 142
MwoI GCNNNNNNNGC 1 cut(s) 94
NlaIV GGNNCC 1 cut(s) 88
PcsI WCGNNNNNNNCGW 1 cut(s) 61
PfeI GAWTC 2 cut(s) 30, 39
PspN4I GGNNCC 1 cut(s) 88
PspOMI GGGCCC 1 cut(s) 86
PspPI GGNCC 2 cut(s) 86, 87
Sau96I GGNCC 2 cut(s) 86, 87
SduI GDGCHC 1 cut(s) 90
SetI ASST 4 cut(s) 21, 74, 108, 142
SfcI CTRYAG 1 cut(s) 45
SmlI CTYRAG 1 cut(s) 98
SmoI CTYRAG 1 cut(s) 98
Sse9I AATT 1 cut(s) 129
SsiI CCGC 1 cut(s) 5
TasI AATT 1 cut(s) 129
TfiI GAWTC 2 cut(s) 30, 39
TscAI CASTG 1 cut(s) 181
TspRI CASTG 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.