Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010161.1

Orthogroup ID

OG0015741

Physical Location & Seq

Genomic Coordinates Reverse (-)

22770 .. 26164

Gene Structure 3395 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010161.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ctgtccggcggtgcctccacgtcgactgtgggttccggcttcatcgacgaatggggggtgttgccggacgggatcgtctggttccggcttcatccttctgggtcgtatactacgtttctttcttctcggatggcagcgcaggcgtgcaggatgggtggctgggatttgacgcaggcttggagcaggtggcctgaggccagatcgtggcgacggtatgccatggattgtatagcgttggctatctctctgagatgggttgataggcggatcaagcggacggacaaggtcgggcggcaaggcatggcgagtttcgcaatggatcttggtgtggattcggctggatctgggattaattctggtttcgaccgacaacagttgaggtcggcgtggcttgctgtgtggactgtgtgtttcccgcgatgtgagtttgacggggcagtgttatggaggtggattgccggcgggtcacctaaggagaaggaagacgggttgggtcaatttgaggtgccatggatgtggtgtcattcctggagacgaattggtttaatttcggtgttatcttatgttcaatgtgctgacgagcgatccttgcacgtggtctggtatctttgggacacggtgtggaagagggcgttggtttttctggcgattgtctatgaggtgatatcaggattctcgggatttcttgtagcccgagtggttgggcgttataggtggttaggggttgggccccttcggctcatggaagtcattcttgatgacggacccataactggtttaggttttagggaagagagtggggagttcatgtccaccaccagttattcccgtatggtccttcaaatcctagaaacctccgccgcccaccttgaagccccaaatcccaggaatccagaaccggcgaatccacccctagaaccggccggaaaaacaccgaatcgacctccagaagaagtagaatatcccctactcgtccttgaaccagccagaaggataggctgcaccttgaacgggcagagagaagaaaaagaaaaaaaaaaggaaaagaaagatgcagacggtccaacccaaaagaagaaagaaagaagcccaaacgaaggcccactgatgcagcccaaaaactggctcattgacacagcccagaagcaagcccactgccacgttagcagccacatcagtagattctaccacgtcagcagattctaccacgtcatcagtccgaatgagtacctcaataaggaagacctaagaaaactatgggtagaacttgagcagcattttggcaacgtttgttactgtctgcttcctgatttagaagtgagatggcatagcctctacttctgtgatttcaagtctgtacttgactacaattcggatacacttcgtatcaagtctttgatggaattttgttggcagaaaatcactgatatgatgttgatcgagaagagtctctctaccttccccgtctctgcattgatgatagccaagaactatcgaattgatgtcaattctggacacatcataagatttcataagcttgttagagccatgaacgtagctaaaaagcacgacaacatacttgtgaagaactataactctagacctgtgggagcaaagacaattccggagtctaattatagtcgtgcccctaaaggaaggcgccaggaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Retrotran_gag_2 zf-CCHC

Protein Analysis

556

Amino Acids

63.7

Weight (kDa)

9.1

Isoelectric Point (pI)

53.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015741)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0135791 RchiOBHm_Chr4g0417091 RchiOBHm_Chr5g0011621 RchiOBHm_Chr7g0185391
rosa_multiflora	Rmu_sc0000367.1_g000002 Rmu_sc0001911.1_g000002 Rmu_sc0002218.1_g000003 Rmu_sc0002316.1_g000068 Rmu_sc0010161.1_g000017
rosa_roxburghii	Rroxscaffold_2G00148360
rosa_rugosa	Rorug02G0091100 Rorug02G0128400 Rorug03G0240300 Rorug04G0138600 Rorug04G0178800 Rorug05G0247200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	174
AasI	GACNNNNNNGTC	1 cut(s)	74
Acc36I	ACCTGC	1 cut(s)	174
AccB1I	GGYRCC	3 cut(s)	11, 505, 1659
AccB7I	CCANNNNNTGG	2 cut(s)	204, 1122
AccI	GTMKAC	2 cut(s)	23, 107
AccII	CGCG	1 cut(s)	418
AccIII	TCCGGA	1 cut(s)	1624
AciI	CCGC	8 cut(s)	9, 265, 274, 292, 416, 462, 858, 861
AclI	AACGTT	1 cut(s)	1287
AclWI	GGATC	5 cut(s)	80, 275, 327, 349, 579
AcoI	YGGCCR	1 cut(s)	921
AcsI	RAATTY	1 cut(s)	1403
AcvI	CACGTG	1 cut(s)	595
AcyI	GRCGYC	1 cut(s)	1660
AdeI	CACNNNGTG	1 cut(s)	621
AfaI	GTAC	2 cut(s)	1229, 1359
AfiI	CCNNNNNNNGG	7 cut(s)	204, 773, 919, 1011, 1097, 1122, 1237
AgsI	TTSAA	6 cut(s)	569, 842, 872, 980, 1009, 1351
AjiI	CACGTC	3 cut(s)	21, 1192, 1210
AjnI	CCWGG	3 cut(s)	527, 884, 1662
AjuI	GAANNNNNNNTTGG	2 cut(s)	617, 649
AluBI	AGCT	2 cut(s)	1537, 1559
AluI	AGCT	2 cut(s)	1537, 1559
Alw26I	GTCTC	3 cut(s)	526, 1454, 1471
AlwI	GGATC	5 cut(s)	80, 275, 327, 349, 579
Ama87I	CYCGRG	2 cut(s)	676, 693
Aor13HI	TCCGGA	1 cut(s)	1624
AoxI	GGCC	5 cut(s)	188, 195, 728, 921, 1099
ApaI	GGGCCC	1 cut(s)	732
ApeKI	GCWGC	5 cut(s)	134, 999, 1111, 1167, 1273
ApoI	RAATTY	1 cut(s)	1403
AseI	ATTAAT	1 cut(s)	351
Asp700I	GAANNNNTTC	1 cut(s)	750
AspLEI	GCGC	2 cut(s)	139, 1662
AspS9I	GGNCC	6 cut(s)	728, 729, 764, 835, 1061, 1100
AsuHPI	GGTGA	2 cut(s)	459, 673
AvaI	CYCGRG	2 cut(s)	676, 693
AvaII	GGWCC	3 cut(s)	764, 835, 1061
AxyI	CCTNAGG	2 cut(s)	192, 471
BaeGI	GKGCMC	2 cut(s)	732, 1648
BanI	GGYRCC	3 cut(s)	11, 505, 1659
BanII	GRGCYC	1 cut(s)	732
BbrPI	CACGTG	1 cut(s)	595
BbsI	GAAGAC	2 cut(s)	489, 1248
BbvI	GCAGC	5 cut(s)	146, 986, 1123, 1179, 1285
BccI	CCATC	5 cut(s)	124, 145, 246, 1317, 1393
BciT130I	CCWGG	3 cut(s)	529, 886, 1664
BciVI	GTATCC	1 cut(s)	1369
BcoDI	GTCTC	3 cut(s)	526, 1454, 1471
BfaI	CTAG	3 cut(s)	848, 914, 1599
BfoI	RGCGCY	1 cut(s)	1663
BfuAI	ACCTGC	1 cut(s)	174
BfuI	GTATCC	1 cut(s)	1369
BglI	GCCNNNNNGGC	1 cut(s)	736
BisI	GCNGC	7 cut(s)	135, 293, 861, 1000, 1112, 1168, 1274
BlsI	GCNGC	7 cut(s)	136, 294, 862, 1001, 1113, 1169, 1275
Bme1390I	CCNGG	3 cut(s)	529, 886, 1664
Bme18I	GGWCC	3 cut(s)	764, 835, 1061
BmeT110I	CYCGRG	2 cut(s)	676, 693
BmgBI	CACGTC	3 cut(s)	21, 1192, 1210
BmgT120I	GGNCC	6 cut(s)	728, 729, 764, 835, 1061, 1100
BmiI	GGNNCC	8 cut(s)	13, 34, 83, 507, 730, 731, 766, 1661
BmrFI	CCNGG	3 cut(s)	529, 886, 1664
BmsI	GCATC	2 cut(s)	1042, 1098
BpiI	GAAGAC	2 cut(s)	489, 1248
BpmI	CTGGAG	2 cut(s)	550, 930
BpuEI	CTTGAG	1 cut(s)	1289
BsaAI	YACGTR	1 cut(s)	595
BsaBI	GATNNNNATC	1 cut(s)	1436
BsaHI	GRCGYC	1 cut(s)	1660
BsaJI	CCNNGG	3 cut(s)	219, 509, 884
BsaWI	WCCGGW	1 cut(s)	1624
BsaXI	ACNNNNNCTCC	2 cut(s)	794, 824
Bsc4I	CCNNNNNNNGG	7 cut(s)	204, 773, 919, 1011, 1097, 1122, 1237
Bse118I	RCCGGY	3 cut(s)	458, 898, 919
Bse1I	ACTGG	3 cut(s)	778, 819, 1127
Bse21I	CCTNAGG	2 cut(s)	192, 471
Bse3DI	GCAATG	1 cut(s)	321
Bse8I	GATNNNNATC	1 cut(s)	1436
BseAI	TCCGGA	1 cut(s)	1624
BseBI	CCWGG	3 cut(s)	529, 886, 1664
BseDI	CCNNGG	3 cut(s)	219, 509, 884
BseGI	GGATG	4 cut(s)	91, 135, 156, 519
BseJI	GATNNNNATC	1 cut(s)	1436
BseLI	CCNNNNNNNGG	7 cut(s)	204, 773, 919, 1011, 1097, 1122, 1237
BseMI	GCAATG	1 cut(s)	321
BseMII	CTCAG	2 cut(s)	183, 239
BseNI	ACTGG	3 cut(s)	778, 819, 1127
BseSI	GKGCMC	2 cut(s)	732, 1648
BseX3I	CGGCCG	1 cut(s)	921
BseXI	GCAGC	5 cut(s)	146, 986, 1123, 1179, 1285
BseYI	CCCAGC	1 cut(s)	159
BsgI	GTGCAG	2 cut(s)	166, 985
Bsh1236I	CGCG	1 cut(s)	418
Bsh1285I	CGRYCG	2 cut(s)	367, 924
BshFI	GGCC	5 cut(s)	190, 197, 730, 923, 1101
BshNI	GGYRCC	3 cut(s)	11, 505, 1659
BsiEI	CGRYCG	2 cut(s)	367, 924
BsiHKCI	CYCGRG	2 cut(s)	676, 693
BsiSI	CCGG	9 cut(s)	6, 36, 65, 85, 459, 899, 920, 924, 1625
BslFI	GGGAC	1 cut(s)	626
BslI	CCNNNNNNNGG	7 cut(s)	204, 773, 919, 1011, 1097, 1122, 1237
BsmAI	GTCTC	3 cut(s)	526, 1454, 1471
BsmBI	CGTCTC	2 cut(s)	526, 1471
BsmFI	GGGAC	1 cut(s)	626
BsnI	GGCC	5 cut(s)	190, 197, 730, 923, 1101
BsoBI	CYCGRG	2 cut(s)	676, 693
Bsp120I	GGGCCC	1 cut(s)	728
Bsp1286I	GDGCHC	2 cut(s)	732, 1648
Bsp13I	TCCGGA	1 cut(s)	1624
Bsp143I	GATC	7 cut(s)	72, 200, 267, 319, 341, 584, 1437
Bsp19I	CCATGG	2 cut(s)	219, 509
BspACI	CCGC	8 cut(s)	9, 265, 274, 292, 416, 462, 858, 861
BspANI	GGCC	5 cut(s)	190, 197, 730, 923, 1101
BspCNI	CTCAG	2 cut(s)	184, 240
BspEI	TCCGGA	1 cut(s)	1624
BspFNI	CGCG	1 cut(s)	418
BspLI	GGNNCC	8 cut(s)	13, 34, 83, 507, 730, 731, 766, 1661
BspMI	ACCTGC	1 cut(s)	174
BspPI	GGATC	5 cut(s)	80, 275, 327, 349, 579
BspT107I	GGYRCC	3 cut(s)	11, 505, 1659
BsrDI	GCAATG	1 cut(s)	321
BsrFI	RCCGGY	3 cut(s)	458, 898, 919
BsrI	ACTGG	3 cut(s)	778, 819, 1127
BssAI	RCCGGY	3 cut(s)	458, 898, 919
BssECI	CCNNGG	3 cut(s)	219, 509, 884
BssMI	GATC	7 cut(s)	72, 200, 267, 319, 341, 584, 1437
BssNAI	GTATAC	1 cut(s)	108
BssNI	GRCGYC	1 cut(s)	1660
BssT1I	CCWWGG	2 cut(s)	219, 509
Bst1107I	GTATAC	1 cut(s)	108
Bst2UI	CCWGG	3 cut(s)	529, 886, 1664
Bst4CI	ACNGT	7 cut(s)	28, 213, 375, 406, 619, 1061, 1298
Bst6I	CTCTTC	3 cut(s)	620, 786, 1439
BstACI	GRCGYC	1 cut(s)	1660
BstBAI	YACGTR	1 cut(s)	595
BstC8I	GCNNGC	6 cut(s)	141, 145, 174, 393, 460, 1149
BstDEI	CTNAG	4 cut(s)	192, 248, 471, 1247
BstDSI	CCRYGG	2 cut(s)	219, 509
BstEII	GGTNACC	1 cut(s)	465
BstENI	CCTNNNNNAGG	1 cut(s)	1235
BstF5I	GGATG	4 cut(s)	91, 135, 156, 519
BstFNI	CGCG	1 cut(s)	418
BstH2I	RGCGCY	1 cut(s)	1663
BstHHI	GCGC	2 cut(s)	139, 1662
BstKTI	GATC	7 cut(s)	75, 203, 270, 322, 344, 587, 1440
BstMAI	GTCTC	3 cut(s)	526, 1454, 1471
BstMBI	GATC	7 cut(s)	72, 200, 267, 319, 341, 584, 1437
BstMCI	CGRYCG	2 cut(s)	367, 924
BstMWI	GCNNNNNNNGC	7 cut(s)	140, 271, 311, 392, 589, 736, 1164
BstNI	CCWGG	3 cut(s)	529, 886, 1664
BstPI	GGTNACC	1 cut(s)	465
BstSCI	CCNGG	3 cut(s)	527, 884, 1662
BstSLI	GKGCMC	2 cut(s)	732, 1648
BstUI	CGCG	1 cut(s)	418
BstV1I	GCAGC	5 cut(s)	146, 986, 1123, 1179, 1285
BstV2I	GAAGAC	2 cut(s)	489, 1248
BstX2I	RGATCY	2 cut(s)	319, 341
BstXI	CCANNNNNNTGG	1 cut(s)	516
BstYI	RGATCY	2 cut(s)	319, 341
BstZ17I	GTATAC	1 cut(s)	108
BstZI	CGGCCG	1 cut(s)	921
Bsu36I	CCTNAGG	2 cut(s)	192, 471
BsuI	GTATCC	1 cut(s)	1369
BsuRI	GGCC	5 cut(s)	190, 197, 730, 923, 1101
BtgI	CCRYGG	2 cut(s)	219, 509
BtgZI	GCGATG	1 cut(s)	433
BtrI	CACGTC	3 cut(s)	21, 1192, 1210
BtsCI	GGATG	4 cut(s)	91, 135, 156, 519
BtsI	GCAGTG	2 cut(s)	444, 1153
BtsIMutI	CAGTG	4 cut(s)	444, 1103, 1153, 1422
BveI	ACCTGC	1 cut(s)	174
Cac8I	GCNNGC	6 cut(s)	141, 145, 174, 393, 460, 1149
CfoI	GCGC	2 cut(s)	139, 1662
Cfr10I	RCCGGY	3 cut(s)	458, 898, 919
Cfr13I	GGNCC	6 cut(s)	728, 729, 764, 835, 1061, 1100
CseI	GACGC	1 cut(s)	178
Csp6I	GTAC	2 cut(s)	1228, 1358
CviAII	CATG	6 cut(s)	220, 301, 510, 742, 808, 1549
CviQI	GTAC	2 cut(s)	1228, 1358
DdeI	CTNAG	4 cut(s)	192, 248, 471, 1247
DinI	GGCGCC	1 cut(s)	1661
DpnI	GATC	7 cut(s)	74, 202, 269, 321, 343, 586, 1439
DpnII	GATC	7 cut(s)	72, 200, 267, 319, 341, 584, 1437
DraIII	CACNNNGTG	1 cut(s)	621
DrdI	GACNNNNNNGTC	1 cut(s)	74
DseDI	GACNNNNNNGTC	1 cut(s)	74
EaeI	YGGCCR	1 cut(s)	921
EagI	CGGCCG	1 cut(s)	921
Eam1104I	CTCTTC	3 cut(s)	620, 786, 1439
EarI	CTCTTC	3 cut(s)	620, 786, 1439
EciI	GGCGGA	2 cut(s)	280, 847
EclXI	CGGCCG	1 cut(s)	921
Eco130I	CCWWGG	2 cut(s)	219, 509
Eco24I	GRGCYC	1 cut(s)	732
Eco32I	GATATC	1 cut(s)	666
Eco47I	GGWCC	3 cut(s)	764, 835, 1061
Eco52I	CGGCCG	1 cut(s)	921
Eco72I	CACGTG	1 cut(s)	595
Eco81I	CCTNAGG	2 cut(s)	192, 471
Eco88I	CYCGRG	2 cut(s)	676, 693
Eco91I	GGTNACC	1 cut(s)	465
EcoNI	CCTNNNNNAGG	1 cut(s)	1235
EcoO109I	RGGNCCY	1 cut(s)	729
EcoO65I	GGTNACC	1 cut(s)	465
EcoRII	CCWGG	3 cut(s)	527, 884, 1662
EcoRV	GATATC	1 cut(s)	666
EcoT14I	CCWWGG	2 cut(s)	219, 509
EcoT38I	GRGCYC	1 cut(s)	732
EgeI	GGCGCC	1 cut(s)	1661
EheI	GGCGCC	1 cut(s)	1661
ErhI	CCWWGG	2 cut(s)	219, 509
Esp3I	CGTCTC	2 cut(s)	526, 1471
FaeI	CATG	6 cut(s)	223, 304, 513, 745, 811, 1552
FalI	AAGNNNNNCTT	2 cut(s)	738, 770
FaqI	GGGAC	1 cut(s)	626
FatI	CATG	6 cut(s)	219, 300, 509, 741, 807, 1548
FauI	CCCGC	2 cut(s)	423, 455
FblI	GTMKAC	2 cut(s)	23, 107
Fnu4HI	GCNGC	7 cut(s)	135, 293, 861, 1000, 1112, 1168, 1274
FokI	GGATG	4 cut(s)	78, 142, 163, 526
FriOI	GRGCYC	1 cut(s)	732
Fsp4HI	GCNGC	7 cut(s)	135, 293, 861, 1000, 1112, 1168, 1274
FspBI	CTAG	3 cut(s)	848, 914, 1599
GlaI	GCGC	2 cut(s)	138, 1661
GluI	GCNGC	7 cut(s)	135, 293, 861, 1000, 1112, 1168, 1274
GsaI	CCCAGC	1 cut(s)	163
GsuI	CTGGAG	2 cut(s)	550, 930
HaeII	RGCGCY	1 cut(s)	1663
HaeIII	GGCC	5 cut(s)	190, 197, 730, 923, 1101
HapII	CCGG	9 cut(s)	6, 36, 65, 85, 459, 899, 920, 924, 1625
HgaI	GACGC	1 cut(s)	178
HhaI	GCGC	2 cut(s)	139, 1662
Hin1I	GRCGYC	1 cut(s)	1660
Hin1II	CATG	6 cut(s)	223, 304, 513, 745, 811, 1552
Hin6I	GCGC	2 cut(s)	137, 1660
HinP1I	GCGC	2 cut(s)	137, 1660
HincII	GTYRAC	1 cut(s)	24
HindII	GTYRAC	1 cut(s)	24
HindIII	AAGCTT	1 cut(s)	1535
HinfI	GANTC	9 cut(s)	332, 672, 889, 904, 937, 1182, 1200, 1447, 1628
HpaII	CCGG	9 cut(s)	6, 36, 65, 85, 459, 899, 920, 924, 1625
HphI	GGTGA	2 cut(s)	459, 673
Hpy166II	GTNNAC	4 cut(s)	24, 108, 402, 813
Hpy188I	TCNGA	4 cut(s)	129, 249, 1221, 1375
Hpy8I	GTNNAC	4 cut(s)	24, 108, 402, 813
Hpy99I	CGWCG	3 cut(s)	25, 50, 213
HpyAV	CCTTC	8 cut(s)	105, 472, 743, 848, 984, 1091, 1468, 1650
HpyCH4III	ACNGT	7 cut(s)	28, 213, 375, 406, 619, 1061, 1298
HpyCH4IV	ACGT	8 cut(s)	20, 113, 594, 1161, 1191, 1209, 1287, 1554
HpyCH4V	TGCA	6 cut(s)	147, 592, 1002, 1055, 1111, 1472
HpyF10VI	GCNNNNNNNGC	7 cut(s)	140, 271, 311, 392, 589, 736, 1164
HpyF3I	CTNAG	4 cut(s)	192, 248, 471, 1247
HpySE526I	ACGT	8 cut(s)	20, 113, 594, 1161, 1191, 1209, 1287, 1554
Hsp92I	GRCGYC	1 cut(s)	1660
Hsp92II	CATG	6 cut(s)	223, 304, 513, 745, 811, 1552
HspAI	GCGC	2 cut(s)	137, 1660
KasI	GGCGCC	1 cut(s)	1659
Kpn2I	TCCGGA	1 cut(s)	1624
KroI	GCCGGC	1 cut(s)	458
KroNI	GCCGGC	1 cut(s)	460
Kzo9I	GATC	7 cut(s)	72, 200, 267, 319, 341, 584, 1437
LmnI	GCTCC	2 cut(s)	180, 1610
Lsp1109I	GCAGC	5 cut(s)	146, 986, 1123, 1179, 1285
LweI	GCATC	2 cut(s)	1042, 1098
MaeI	CTAG	3 cut(s)	848, 914, 1599
MaeII	ACGT	8 cut(s)	20, 113, 594, 1161, 1191, 1209, 1287, 1554
MaeIII	GTNAC	2 cut(s)	465, 1292
MalI	GATC	7 cut(s)	74, 202, 269, 321, 343, 586, 1439
MboI	GATC	7 cut(s)	72, 200, 267, 319, 341, 584, 1437
MflI	RGATCY	2 cut(s)	319, 341
MhlI	GDGCHC	2 cut(s)	732, 1648
Mly113I	GGCGCC	1 cut(s)	1660
MlyI	GAGTC	2 cut(s)	1456, 1637
MmeI	TCCRAC	1 cut(s)	1088
MroI	TCCGGA	1 cut(s)	1624
MroNI	GCCGGC	1 cut(s)	458
MroXI	GAANNNNTTC	1 cut(s)	750
MseI	TTAA	2 cut(s)	351, 545
MslI	CAYNNNNRTG	3 cut(s)	514, 1427, 1580
MspI	CCGG	9 cut(s)	6, 36, 65, 85, 459, 899, 920, 924, 1625
MspR9I	CCNGG	3 cut(s)	529, 886, 1664
MvaI	CCWGG	3 cut(s)	529, 886, 1664
MvnI	CGCG	1 cut(s)	418
MwoI	GCNNNNNNNGC	7 cut(s)	140, 271, 311, 392, 589, 736, 1164
NaeI	GCCGGC	1 cut(s)	460
NarI	GGCGCC	1 cut(s)	1660
NcoI	CCATGG	2 cut(s)	219, 509
NdeII	GATC	7 cut(s)	72, 200, 267, 319, 341, 584, 1437
NgoMIV	GCCGGC	1 cut(s)	458
NlaIII	CATG	6 cut(s)	223, 304, 513, 745, 811, 1552
NlaIV	GGNNCC	8 cut(s)	13, 34, 83, 507, 730, 731, 766, 1661
NmuCI	GTSAC	1 cut(s)	465
PaqCI	CACCTGC	1 cut(s)	174
PcsI	WCGNNNNNNNCGW	1 cut(s)	110
PdiI	GCCGGC	1 cut(s)	460
PdmI	GAANNNNTTC	1 cut(s)	750
PfeI	GAWTC	7 cut(s)	332, 672, 889, 904, 937, 1182, 1200
PflFI	GACNNNGTC	1 cut(s)	284
PflMI	CCANNNNNTGG	2 cut(s)	204, 1122
PfoI	TCCNGGA	1 cut(s)	527
PkrI	GCNGC	7 cut(s)	136, 294, 862, 1001, 1113, 1169, 1275
PleI	GAGTC	2 cut(s)	1455, 1636
PluTI	GGCGCC	1 cut(s)	1663
PmaCI	CACGTG	1 cut(s)	595
PmlI	CACGTG	1 cut(s)	595
PpsI	GAGTC	2 cut(s)	1455, 1636
Ppu21I	YACGTR	1 cut(s)	595
PshBI	ATTAAT	1 cut(s)	351
Psp1406I	AACGTT	1 cut(s)	1287
Psp6I	CCWGG	3 cut(s)	527, 884, 1662
PspCI	CACGTG	1 cut(s)	595
PspEI	GGTNACC	1 cut(s)	465
PspFI	CCCAGC	1 cut(s)	159
PspGI	CCWGG	3 cut(s)	527, 884, 1662
PspN4I	GGNNCC	8 cut(s)	13, 34, 83, 507, 730, 731, 766, 1661
PspOMI	GGGCCC	1 cut(s)	728
PspPI	GGNCC	6 cut(s)	728, 729, 764, 835, 1061, 1100
PsuI	RGATCY	2 cut(s)	319, 341
PsyI	GACNNNGTC	1 cut(s)	284
RsaI	GTAC	2 cut(s)	1229, 1359
RsaNI	GTAC	2 cut(s)	1228, 1358
RseI	CAYNNNNRTG	3 cut(s)	514, 1427, 1580
SalI	GTCGAC	1 cut(s)	22
SaqAI	TTAA	2 cut(s)	351, 545
SatI	GCNGC	7 cut(s)	135, 293, 861, 1000, 1112, 1168, 1274
Sau3AI	GATC	7 cut(s)	72, 200, 267, 319, 341, 584, 1437
Sau96I	GGNCC	6 cut(s)	728, 729, 764, 835, 1061, 1100
SchI	GAGTC	2 cut(s)	1456, 1637
ScrFI	CCNGG	3 cut(s)	529, 886, 1664
SduI	GDGCHC	2 cut(s)	732, 1648
SfaNI	GCATC	2 cut(s)	1042, 1098
SfoI	GGCGCC	1 cut(s)	1661
SinI	GGWCC	3 cut(s)	764, 835, 1061
SmiMI	CAYNNNNRTG	3 cut(s)	514, 1427, 1580
SmlI	CTYRAG	1 cut(s)	1268
SmoI	CTYRAG	1 cut(s)	1268
SsiI	CCGC	8 cut(s)	9, 265, 274, 292, 416, 462, 858, 861
SspDI	GGCGCC	1 cut(s)	1659
SspMI	CTAG	3 cut(s)	848, 914, 1599
StyD4I	CCNGG	3 cut(s)	527, 884, 1662
StyI	CCWWGG	2 cut(s)	219, 509
TaaI	ACNGT	7 cut(s)	28, 213, 375, 406, 619, 1061, 1298
TaiI	ACGT	8 cut(s)	23, 116, 597, 1164, 1194, 1212, 1290, 1557
TaqI	TCGA	6 cut(s)	23, 45, 363, 940, 1440, 1495
TaqII	GACCGA	1 cut(s)	381
TatI	WGTACW	1 cut(s)	1357
TauI	GCSGC	2 cut(s)	295, 863
TfiI	GAWTC	7 cut(s)	332, 672, 889, 904, 937, 1182, 1200
Tru1I	TTAA	2 cut(s)	351, 545
Tru9I	TTAA	2 cut(s)	351, 545
TscAI	CASTG	4 cut(s)	444, 1110, 1160, 1429
TseFI	GTSAC	1 cut(s)	465
TseI	GCWGC	5 cut(s)	134, 999, 1111, 1167, 1273
Tsp45I	GTSAC	1 cut(s)	465
TspDTI	ATGAA	5 cut(s)	31, 80, 796, 1520, 1565
TspGWI	ACGGA	2 cut(s)	293, 777
TspRI	CASTG	4 cut(s)	444, 1110, 1160, 1429
Tth111I	GACNNNGTC	1 cut(s)	284
Van91I	CCANNNNNTGG	2 cut(s)	204, 1122
VpaK11BI	GGWCC	3 cut(s)	764, 835, 1061
VspI	ATTAAT	1 cut(s)	351
XagI	CCTNNNNNAGG	1 cut(s)	1235
XapI	RAATTY	1 cut(s)	1403
XbaI	TCTAGA	1 cut(s)	1598
XcmI	CCANNNNNNNNNTGG	1 cut(s)	25
XmiI	GTMKAC	2 cut(s)	23, 107
XmnI	GAANNNNTTC	1 cut(s)	750
XspI	CTAG	3 cut(s)	848, 914, 1599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.