Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015741

Physical Location & Seq

Genomic Coordinates Reverse (-)

7693584 .. 7697597

Gene Structure 4014 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29225

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGCCAAAAATACTTACTCCCCTTTGGATCAACGAGAGATTCTTTACCTTCTGACCGTCGGATACTACAGAAGTGGTGCATATTTAACCAGCCGGCGTCTTCTGGACCGTACGGTTGTTCTTCAAAAATGGAAAGATTGGTTGAAGACTTTAGATGCCGGGAAAAGAAAACTTGGGGAGGACATAACATTAGCTATGTTGTTGTCAGACAATGTTTGGGAGAATGTGATGGCTATAGTGAATATCACAGAGCCAATATATTTTCTAATTAAATATTGTGATGGTGATGGTCAAAAAATGGGTGAAGTTTATGAAAGGATGGACAACATGCTTGGAGAAATAAAAGTTATGAGGACCGAGTTGTACTCTGAATGTTTTCCACAAATCAAGTATCTCAACAAACCAGCATGGGGAGGATTAACTCGAAAAAGCCCTAATCAAGGTATAGAAGTGATTACAGCTCTCACGGAAGCATTTGATAAGATAGTAGAAGACCCACAAGAAGCAGAGTTATTACGTAATCAATCTGCCTTTTTTCATCAACGAAAGGGTATTTTTGCTACACAAGCTGCCCAAACAGATGCTGTAACTATGGATGCTATTAGTTGGTGGTCAACATATGGTTCACAAGTTCCACAATTAGCAGAAGTGGCGCAAAAGGCAGCGAAAAAGAGCTCCGAGAATAGAGGGACGAAAATTAGGGTTTTGGAAACGCACAGAAGCGACTGTTGCCTGTCCGGCGGCGTCCCAGCATCGACCATAGGTCCAGGCCTCATCGATGAGTGGAGGATGTTGCCGGACGGGATTGTGGGGGCTTGGGGTTCCAATTTTTGGTATCCGGTTCGACCTTCTTGGTCGTGTATGATTTTTCGTCCCTCTCAGGCGGCGGTGCAGGCGGGCAGGATGGATGGTTGGCGATCGACGCAGGCTTGGAGCAAGTGGTCAGAGGCTGGATCGTGGCGGCGGTTTTCCATGGATCGTACAGCGCTGACTATATCTCCGGGGTTGGTCGATCGGAGGAGAGTACAAGGGTGTCGAACTTTCAGGCGGAAGGACGAAGCCGGGCGACAAGGCACGGCGAGTTTCTCTCTGATTCTCGGTGTGGGCTCATCGAGATCTGGCTTTACGCCTGGATCTGGCCGACAAAAGTTGAGGTTGGTGTGGCTTGCTGCGTGGTTGGAGTTTTTCCGGCGGTGCGAGTTCGACGGGAAGGATTTATGGGGGTGGTCTGCAGGCGGGTCATCTGAAGAGGAGGAAGATGGTCGCGGCGGCTGGTTTTTGATTTTGTTTAAAGTAGTTTTCTTGGTCAAGATTTCAATTAGGGGTTTGGTTAGGTTTTTCTGGTTTTTAGCATGTCCCTACTCTGTTGAGCTAGGGTTGGGTCAAATTGAGGTGCCATGGATGTGGTGTTTTTCCTGGGGACGAATTGGCTTATTGTTGGTTTTGTCTTATGGTCAATGTGCTGACGAGCGATCCTTGCACGTGGTCTGGCATTTTTGGGACACGGTGTGGAAAAGGGCGTTGGTTGTTTTAGCGGTTGTCTATGAGGTGGAATCGATATTCTCGGGATTCTCGGTAGCCCGAGTCGTTGGGCGGTATTGGTGGTTAGGGGTTGGGCTCTTTCAGCTCATGGAAGTCATTTATGGTGACGGACCCGTAACTGGTTTAGGTTTTAGGGAGGAGAGTGGGGAATTCTTGTCCACCACCGGTCATTCCCGTGCTCTGAGTCTTAAGAAGACAGTTGAGGATCGAATTGTGAAAGATGGCTTCATTGGAATAGCCGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF659 Dimer_Tnp_hAT

Protein Analysis

595

Amino Acids

67.48

Weight (kDa)

8.84

Isoelectric Point (pI)

41.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015741)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0135791 RchiOBHm_Chr4g0417091 RchiOBHm_Chr5g0011621 RchiOBHm_Chr7g0185391
rosa_multiflora	Rmu_sc0000367.1_g000002 Rmu_sc0001911.1_g000002 Rmu_sc0002218.1_g000003 Rmu_sc0002316.1_g000068 Rmu_sc0010161.1_g000017
rosa_roxburghii	Rroxscaffold_2G00148360
rosa_rugosa	Rorug02G0091100 Rorug02G0128400 Rorug03G0240300 Rorug04G0138600 Rorug04G0178800 Rorug05G0247200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1393
AccB7I	CCANNNNNTGG	1 cut(s)	831
AccII	CGCG	1 cut(s)	1266
AclWI	GGATC	6 cut(s)	36, 961, 984, 1141, 1467, 1755
AcoI	YGGCCR	2 cut(s)	3, 1138
AcsI	RAATTY	1 cut(s)	1691
AcuI	CTGAAG	1 cut(s)	1266
AcvI	CACGTG	1 cut(s)	1483
AcyI	GRCGYC	2 cut(s)	97, 744
AdeI	CACNNNGTG	1 cut(s)	1509
AfaI	GTAC	4 cut(s)	112, 365, 982, 1026
AfeI	AGCGCT	1 cut(s)	987
AfiI	CCNNNNNNNGG	5 cut(s)	410, 440, 831, 1136, 1661
AflII	CTTAAG	1 cut(s)	1730
AgeI	ACCGGT	1 cut(s)	1706
AgsI	TTSAA	3 cut(s)	125, 145, 1317
AhdI	GACNNNNNGTC	1 cut(s)	762
AjnI	CCWGG	3 cut(s)	766, 1129, 1415
AjuI	GAANNNNNNNTTGG	2 cut(s)	1505, 1537
AluBI	AGCT	6 cut(s)	194, 461, 569, 675, 1372, 1627
AluI	AGCT	6 cut(s)	194, 461, 569, 675, 1372, 1627
Alw21I	GWGCWC	2 cut(s)	677, 1723
AlwI	GGATC	6 cut(s)	36, 961, 984, 1141, 1467, 1755
AlwNI	CAGNNNCTG	2 cut(s)	584, 950
Ama87I	CYCGRG	2 cut(s)	1564, 1581
Aor51HI	AGCGCT	1 cut(s)	987
AoxI	GGCC	3 cut(s)	3, 769, 1138
ApeKI	GCWGC	3 cut(s)	569, 662, 1169
ApoI	RAATTY	1 cut(s)	1691
AsiGI	ACCGGT	1 cut(s)	1706
Asp700I	GAANNNNTTC	1 cut(s)	375
AspLEI	GCGC	2 cut(s)	655, 988
AspS9I	GGNCC	4 cut(s)	106, 354, 764, 1652
AsuC2I	CCSGG	3 cut(s)	160, 1002, 1063
AsuHPI	GGTGA	3 cut(s)	296, 314, 1658
AvaI	CYCGRG	2 cut(s)	1564, 1581
AvaII	GGWCC	4 cut(s)	106, 354, 764, 1652
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	1393
BanII	GRGCYC	3 cut(s)	677, 1109, 1620
BbrPI	CACGTG	1 cut(s)	1483
BbsI	GAAGAC	4 cut(s)	92, 152, 498, 1742
Bbv12I	GWGCWC	2 cut(s)	677, 1723
BbvI	GCAGC	3 cut(s)	556, 674, 1156
BccI	CCATC	8 cut(s)	223, 275, 281, 313, 898, 902, 1253, 1757
BceAI	ACGGC	1 cut(s)	1092
BciT130I	CCWGG	3 cut(s)	768, 1131, 1417
BciVI	GTATCC	2 cut(s)	56, 846
BcnI	CCSGG	3 cut(s)	160, 1002, 1063
BfaI	CTAG	1 cut(s)	1373
BfmI	CTRYAG	3 cut(s)	67, 234, 1230
BfoI	RGCGCY	1 cut(s)	989
BfrI	CTTAAG	1 cut(s)	1730
BfuI	GTATCC	2 cut(s)	56, 846
BglI	GCCNNNNNGGC	1 cut(s)	738
BglII	AGATCT	1 cut(s)	1115
BisI	GCNGC	8 cut(s)	570, 663, 742, 885, 962, 1170, 1267, 1270
BlsI	GCNGC	8 cut(s)	571, 664, 743, 886, 963, 1171, 1268, 1271
Bme1390I	CCNGG	6 cut(s)	160, 768, 1002, 1063, 1131, 1417
Bme18I	GGWCC	4 cut(s)	106, 354, 764, 1652
BmeRI	GACNNNNNGTC	1 cut(s)	762
BmeT110I	CYCGRG	2 cut(s)	1564, 1581
BmgT120I	GGNCC	4 cut(s)	106, 354, 764, 1652
BmiI	GGNNCC	3 cut(s)	823, 1395, 1654
BmrFI	CCNGG	6 cut(s)	160, 768, 1002, 1063, 1131, 1417
BmsI	GCATC	4 cut(s)	145, 571, 586, 761
BpiI	GAAGAC	4 cut(s)	92, 152, 498, 1742
BplI	GAGNNNNNCTC	4 cut(s)	350, 382, 1072, 1104
BpuMI	CCSGG	3 cut(s)	160, 1002, 1063
Bsa29I	ATCGAT	2 cut(s)	777, 1556
BsaAI	YACGTR	2 cut(s)	518, 1483
BsaHI	GRCGYC	2 cut(s)	97, 744
BsaJI	CCNNGG	4 cut(s)	972, 1001, 1397, 1416
BsaWI	WCCGGW	2 cut(s)	838, 1706
BsaXI	ACNNNNNCTCC	2 cut(s)	982, 1012
Bsc4I	CCNNNNNNNGG	5 cut(s)	410, 440, 831, 1136, 1661
Bse118I	RCCGGY	2 cut(s)	93, 1706
Bse1I	ACTGG	1 cut(s)	1666
BseBI	CCWGG	3 cut(s)	768, 1131, 1417
BseCI	ATCGAT	2 cut(s)	777, 1556
BseDI	CCNNGG	4 cut(s)	972, 1001, 1397, 1416
BseGI	GGATG	6 cut(s)	324, 601, 795, 909, 913, 1407
BseLI	CCNNNNNNNGG	5 cut(s)	410, 440, 831, 1136, 1661
BseMII	CTCAG	2 cut(s)	893, 1715
BseNI	ACTGG	1 cut(s)	1666
BseRI	GAGGAG	3 cut(s)	1033, 1265, 1694
BseXI	GCAGC	3 cut(s)	556, 674, 1156
BseYI	CCCAGC	1 cut(s)	748
BsgI	GTGCAG	1 cut(s)	911
Bsh1236I	CGCG	1 cut(s)	1266
Bsh1285I	CGRYCG	2 cut(s)	920, 1015
BshFI	GGCC	3 cut(s)	5, 771, 1140
BshNI	GGYRCC	1 cut(s)	1393
BshTI	ACCGGT	1 cut(s)	1706
BshVI	ATCGAT	2 cut(s)	777, 1556
BsiEI	CGRYCG	2 cut(s)	920, 1015
BsiHKAI	GWGCWC	2 cut(s)	677, 1723
BsiHKCI	CYCGRG	2 cut(s)	1564, 1581
BsiSI	CCGG	9 cut(s)	94, 159, 738, 797, 839, 1001, 1062, 1189, 1707
BsiWI	CGTACG	1 cut(s)	110
BslFI	GGGAC	6 cut(s)	703, 731, 858, 1341, 1434, 1514
BslI	CCNNNNNNNGG	5 cut(s)	410, 440, 831, 1136, 1661
BsmFI	GGGAC	6 cut(s)	703, 731, 858, 1341, 1434, 1514
BsnI	GGCC	3 cut(s)	5, 771, 1140
BsoBI	CYCGRG	2 cut(s)	1564, 1581
Bsp1286I	GDGCHC	4 cut(s)	677, 1109, 1620, 1723
Bsp143I	GATC	9 cut(s)	28, 917, 953, 976, 1012, 1115, 1133, 1472, 1747
Bsp19I	CCATGG	2 cut(s)	972, 1397
BspANI	GGCC	3 cut(s)	5, 771, 1140
BspCNI	CTCAG	2 cut(s)	892, 1716
BspDI	ATCGAT	2 cut(s)	777, 1556
BspFNI	CGCG	1 cut(s)	1266
BspLI	GGNNCC	3 cut(s)	823, 1395, 1654
BspMAI	CTGCAG	1 cut(s)	1234
BspPI	GGATC	6 cut(s)	36, 961, 984, 1141, 1467, 1755
BspT107I	GGYRCC	1 cut(s)	1393
BspTI	CTTAAG	1 cut(s)	1730
BsrFI	RCCGGY	2 cut(s)	93, 1706
BsrI	ACTGG	1 cut(s)	1666
BssAI	RCCGGY	2 cut(s)	93, 1706
BssECI	CCNNGG	4 cut(s)	972, 1001, 1397, 1416
BssMI	GATC	9 cut(s)	28, 917, 953, 976, 1012, 1115, 1133, 1472, 1747
BssNI	GRCGYC	2 cut(s)	97, 744
BssT1I	CCWWGG	2 cut(s)	972, 1397
Bst2UI	CCWGG	3 cut(s)	768, 1131, 1417
Bst4CI	ACNGT	6 cut(s)	58, 110, 115, 728, 1507, 1741
Bst6I	CTCTTC	1 cut(s)	1242
BstACI	GRCGYC	2 cut(s)	97, 744
BstAFI	CTTAAG	1 cut(s)	1730
BstBAI	YACGTR	2 cut(s)	518, 1483
BstC8I	GCNNGC	6 cut(s)	95, 894, 898, 927, 1167, 1234
BstDEI	CTNAG	2 cut(s)	879, 1724
BstDSI	CCRYGG	2 cut(s)	972, 1397
BstENI	CCTNNNNNAGG	1 cut(s)	438
BstF5I	GGATG	6 cut(s)	324, 601, 795, 909, 913, 1407
BstFNI	CGCG	1 cut(s)	1266
BstH2I	RGCGCY	1 cut(s)	989
BstHHI	GCGC	2 cut(s)	655, 988
BstKTI	GATC	9 cut(s)	31, 920, 956, 979, 1015, 1118, 1136, 1475, 1750
BstMBI	GATC	9 cut(s)	28, 917, 953, 976, 1012, 1115, 1133, 1472, 1747
BstMCI	CGRYCG	2 cut(s)	920, 1015
BstMWI	GCNNNNNNNGC	9 cut(s)	566, 650, 659, 729, 738, 893, 922, 1477, 1624
BstNI	CCWGG	3 cut(s)	768, 1131, 1417
BstNSI	RCATGY	2 cut(s)	331, 1356
BstSCI	CCNGG	6 cut(s)	158, 766, 1000, 1061, 1129, 1415
BstSFI	CTRYAG	3 cut(s)	67, 234, 1230
BstSNI	TACGTA	1 cut(s)	518
BstUI	CGCG	1 cut(s)	1266
BstV1I	GCAGC	3 cut(s)	556, 674, 1156
BstV2I	GAAGAC	4 cut(s)	92, 152, 498, 1742
BstX2I	RGATCY	2 cut(s)	1115, 1133
BstXI	CCANNNNNNTGG	1 cut(s)	1404
BstYI	RGATCY	2 cut(s)	1115, 1133
Bsu15I	ATCGAT	2 cut(s)	777, 1556
BsuI	GTATCC	2 cut(s)	56, 846
BsuRI	GGCC	3 cut(s)	5, 771, 1140
BsuTUI	ATCGAT	2 cut(s)	777, 1556
BtgI	CCRYGG	2 cut(s)	972, 1397
BtsCI	GGATG	6 cut(s)	324, 601, 795, 909, 913, 1407
Cac8I	GCNNGC	6 cut(s)	95, 894, 898, 927, 1167, 1234
CaiI	CAGNNNCTG	2 cut(s)	584, 950
CfoI	GCGC	2 cut(s)	655, 988
Cfr10I	RCCGGY	2 cut(s)	93, 1706
Cfr13I	GGNCC	4 cut(s)	106, 354, 764, 1652
ClaI	ATCGAT	2 cut(s)	777, 1556
CseI	GACGC	3 cut(s)	86, 733, 931
Csp6I	GTAC	4 cut(s)	111, 364, 981, 1025
CspAI	ACCGGT	1 cut(s)	1706
CviAII	CATG	6 cut(s)	328, 408, 973, 1353, 1398, 1630
CviQI	GTAC	4 cut(s)	111, 364, 981, 1025
DdeI	CTNAG	2 cut(s)	879, 1724
DpnI	GATC	9 cut(s)	30, 919, 955, 978, 1014, 1117, 1135, 1474, 1749
DpnII	GATC	9 cut(s)	28, 917, 953, 976, 1012, 1115, 1133, 1472, 1747
DraI	TTTAAA	1 cut(s)	1291
DraIII	CACNNNGTG	1 cut(s)	1509
DriI	GACNNNNNGTC	1 cut(s)	762
EaeI	YGGCCR	2 cut(s)	3, 1138
Eam1104I	CTCTTC	1 cut(s)	1242
Eam1105I	GACNNNNNGTC	1 cut(s)	762
EarI	CTCTTC	1 cut(s)	1242
EciI	GGCGGA	1 cut(s)	1063
Ecl136II	GAGCTC	1 cut(s)	675
Eco105I	TACGTA	1 cut(s)	518
Eco130I	CCWWGG	2 cut(s)	972, 1397
Eco147I	AGGCCT	1 cut(s)	771
Eco24I	GRGCYC	3 cut(s)	677, 1109, 1620
Eco47I	GGWCC	4 cut(s)	106, 354, 764, 1652
Eco47III	AGCGCT	1 cut(s)	987
Eco53kI	GAGCTC	1 cut(s)	675
Eco57I	CTGAAG	1 cut(s)	1266
Eco72I	CACGTG	1 cut(s)	1483
Eco88I	CYCGRG	2 cut(s)	1564, 1581
EcoICRI	GAGCTC	1 cut(s)	675
EcoNI	CCTNNNNNAGG	1 cut(s)	438
EcoRI	GAATTC	1 cut(s)	1691
EcoRII	CCWGG	3 cut(s)	766, 1129, 1415
EcoT14I	CCWWGG	2 cut(s)	972, 1397
EcoT38I	GRGCYC	3 cut(s)	677, 1109, 1620
ErhI	CCWWGG	2 cut(s)	972, 1397
FaeI	CATG	6 cut(s)	331, 411, 976, 1356, 1401, 1633
FaqI	GGGAC	6 cut(s)	703, 731, 858, 1341, 1434, 1514
FatI	CATG	6 cut(s)	327, 407, 972, 1352, 1397, 1629
FauI	CCCGC	2 cut(s)	889, 1229
FauNDI	CATATG	1 cut(s)	619
Fnu4HI	GCNGC	8 cut(s)	570, 663, 742, 885, 962, 1170, 1267, 1270
FokI	GGATG	6 cut(s)	331, 608, 802, 916, 920, 1414
FriOI	GRGCYC	3 cut(s)	677, 1109, 1620
Fsp4HI	GCNGC	8 cut(s)	570, 663, 742, 885, 962, 1170, 1267, 1270
FspBI	CTAG	1 cut(s)	1373
GlaI	GCGC	2 cut(s)	654, 987
GluI	GCNGC	8 cut(s)	570, 663, 742, 885, 962, 1170, 1267, 1270
GsaI	CCCAGC	1 cut(s)	752
HaeII	RGCGCY	1 cut(s)	989
HaeIII	GGCC	3 cut(s)	5, 771, 1140
HapII	CCGG	9 cut(s)	94, 159, 738, 797, 839, 1001, 1062, 1189, 1707
HgaI	GACGC	3 cut(s)	86, 733, 931
HhaI	GCGC	2 cut(s)	655, 988
Hin1I	GRCGYC	2 cut(s)	97, 744
Hin1II	CATG	6 cut(s)	331, 411, 976, 1356, 1401, 1633
Hin6I	GCGC	2 cut(s)	653, 986
HinP1I	GCGC	2 cut(s)	653, 986
HincII	GTYRAC	1 cut(s)	615
HindII	GTYRAC	1 cut(s)	615
HinfI	GANTC	6 cut(s)	40, 1093, 1553, 1569, 1584, 1726
HpaII	CCGG	9 cut(s)	94, 159, 738, 797, 839, 1001, 1062, 1189, 1707
HphI	GGTGA	3 cut(s)	296, 314, 1658
Hpy166II	GTNNAC	3 cut(s)	615, 626, 1701
Hpy188III	TCNNGA	4 cut(s)	104, 1113, 1309, 1566
Hpy8I	GTNNAC	3 cut(s)	615, 626, 1701
Hpy99I	CGWCG	3 cut(s)	62, 925, 1208
HpyAV	CCTTC	4 cut(s)	59, 858, 1045, 1204
HpyCH4III	ACNGT	6 cut(s)	58, 110, 115, 728, 1507, 1741
HpyCH4IV	ACGT	2 cut(s)	517, 1482
HpyCH4V	TGCA	4 cut(s)	80, 892, 1232, 1480
HpyF10VI	GCNNNNNNNGC	9 cut(s)	566, 650, 659, 729, 738, 893, 922, 1477, 1624
HpyF3I	CTNAG	2 cut(s)	879, 1724
HpySE526I	ACGT	2 cut(s)	517, 1482
Hsp92I	GRCGYC	2 cut(s)	97, 744
Hsp92II	CATG	6 cut(s)	331, 411, 976, 1356, 1401, 1633
HspAI	GCGC	2 cut(s)	653, 986
KroI	GCCGGC	1 cut(s)	93
KroNI	GCCGGC	1 cut(s)	95
Kzo9I	GATC	9 cut(s)	28, 917, 953, 976, 1012, 1115, 1133, 1472, 1747
LmnI	GCTCC	2 cut(s)	680, 933
Lsp1109I	GCAGC	3 cut(s)	556, 674, 1156
LweI	GCATC	4 cut(s)	145, 571, 586, 761
MaeI	CTAG	1 cut(s)	1373
MaeII	ACGT	2 cut(s)	517, 1482
MaeIII	GTNAC	3 cut(s)	586, 1646, 1657
MalI	GATC	9 cut(s)	30, 919, 955, 978, 1014, 1117, 1135, 1474, 1749
MboI	GATC	9 cut(s)	28, 917, 953, 976, 1012, 1115, 1133, 1472, 1747
MboII	GAAGA	7 cut(s)	92, 113, 157, 503, 1259, 1268, 1747
MflI	RGATCY	2 cut(s)	1115, 1133
MhlI	GDGCHC	4 cut(s)	677, 1109, 1620, 1723
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	9 cut(s)	267, 638, 696, 826, 1317, 1386, 1425, 1691, 1752
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	1593, 1735
MmeI	TCCRAC	2 cut(s)	40, 1158
Mox20I	TGGCCA	1 cut(s)	5
MroNI	GCCGGC	1 cut(s)	93
MroXI	GAANNNNTTC	1 cut(s)	375
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	5 cut(s)	86, 270, 419, 1290, 1731
MslI	CAYNNNNRTG	2 cut(s)	1402, 1716
Msp20I	TGGCCA	1 cut(s)	5
MspCI	CTTAAG	1 cut(s)	1730
MspI	CCGG	9 cut(s)	94, 159, 738, 797, 839, 1001, 1062, 1189, 1707
MspR9I	CCNGG	6 cut(s)	160, 768, 1002, 1063, 1131, 1417
MvaI	CCWGG	3 cut(s)	768, 1131, 1417
MvnI	CGCG	1 cut(s)	1266
MwoI	GCNNNNNNNGC	9 cut(s)	566, 650, 659, 729, 738, 893, 922, 1477, 1624
NaeI	GCCGGC	1 cut(s)	95
NciI	CCSGG	3 cut(s)	160, 1002, 1063
NcoI	CCATGG	2 cut(s)	972, 1397
NdeI	CATATG	1 cut(s)	619
NdeII	GATC	9 cut(s)	28, 917, 953, 976, 1012, 1115, 1133, 1472, 1747
NgoMIV	GCCGGC	1 cut(s)	93
NlaIII	CATG	6 cut(s)	331, 411, 976, 1356, 1401, 1633
NlaIV	GGNNCC	3 cut(s)	823, 1395, 1654
NmuCI	GTSAC	1 cut(s)	1646
NspI	RCATGY	2 cut(s)	331, 1356
PceI	AGGCCT	1 cut(s)	771
PdiI	GCCGGC	1 cut(s)	95
PdmI	GAANNNNTTC	1 cut(s)	375
PfeI	GAWTC	4 cut(s)	40, 1093, 1553, 1569
Pfl23II	CGTACG	1 cut(s)	110
PflMI	CCANNNNNTGG	1 cut(s)	831
PinAI	ACCGGT	1 cut(s)	1706
PkrI	GCNGC	8 cut(s)	571, 664, 743, 886, 963, 1171, 1268, 1271
Ple19I	CGATCG	2 cut(s)	920, 1015
PleI	GAGTC	2 cut(s)	1592, 1734
PmaCI	CACGTG	1 cut(s)	1483
PmlI	CACGTG	1 cut(s)	1483
PpsI	GAGTC	2 cut(s)	1592, 1734
Ppu21I	YACGTR	2 cut(s)	518, 1483
Psp124BI	GAGCTC	1 cut(s)	677
Psp6I	CCWGG	3 cut(s)	766, 1129, 1415
PspCI	CACGTG	1 cut(s)	1483
PspFI	CCCAGC	1 cut(s)	748
PspGI	CCWGG	3 cut(s)	766, 1129, 1415
PspLI	CGTACG	1 cut(s)	110
PspN4I	GGNNCC	3 cut(s)	823, 1395, 1654
PspPI	GGNCC	4 cut(s)	106, 354, 764, 1652
PstI	CTGCAG	1 cut(s)	1234
PstNI	CAGNNNCTG	2 cut(s)	584, 950
PsuI	RGATCY	2 cut(s)	1115, 1133
PvuI	CGATCG	2 cut(s)	920, 1015
RsaI	GTAC	4 cut(s)	112, 365, 982, 1026
RsaNI	GTAC	4 cut(s)	111, 364, 981, 1025
RseI	CAYNNNNRTG	2 cut(s)	1402, 1716
SacI	GAGCTC	1 cut(s)	677
SaqAI	TTAA	5 cut(s)	86, 270, 419, 1290, 1731
SatI	GCNGC	8 cut(s)	570, 663, 742, 885, 962, 1170, 1267, 1270
Sau3AI	GATC	9 cut(s)	28, 917, 953, 976, 1012, 1115, 1133, 1472, 1747
Sau96I	GGNCC	4 cut(s)	106, 354, 764, 1652
SchI	GAGTC	2 cut(s)	1593, 1735
ScrFI	CCNGG	6 cut(s)	160, 768, 1002, 1063, 1131, 1417
SduI	GDGCHC	4 cut(s)	677, 1109, 1620, 1723
SfaNI	GCATC	4 cut(s)	145, 571, 586, 761
SfcI	CTRYAG	3 cut(s)	67, 234, 1230
SinI	GGWCC	4 cut(s)	106, 354, 764, 1652
SmiMI	CAYNNNNRTG	2 cut(s)	1402, 1716
SmlI	CTYRAG	1 cut(s)	1730
SmoI	CTYRAG	1 cut(s)	1730
SnaBI	TACGTA	1 cut(s)	518
Sse9I	AATT	9 cut(s)	267, 638, 696, 826, 1317, 1386, 1425, 1691, 1752
SseBI	AGGCCT	1 cut(s)	771
SspI	AATATT	1 cut(s)	275
SspMI	CTAG	1 cut(s)	1373
SstI	GAGCTC	1 cut(s)	677
StuI	AGGCCT	1 cut(s)	771
StyD4I	CCNGG	6 cut(s)	158, 766, 1000, 1061, 1129, 1415
StyI	CCWWGG	2 cut(s)	972, 1397
TaaI	ACNGT	6 cut(s)	58, 110, 115, 728, 1507, 1741
TaiI	ACGT	2 cut(s)	520, 1485
TaqII	GACCGA	1 cut(s)	371
TasI	AATT	9 cut(s)	267, 638, 696, 826, 1317, 1386, 1425, 1691, 1752
TatI	WGTACW	2 cut(s)	363, 1024
TauI	GCSGC	5 cut(s)	744, 887, 964, 1269, 1272
TfiI	GAWTC	4 cut(s)	40, 1093, 1553, 1569
Tru1I	TTAA	5 cut(s)	86, 270, 419, 1290, 1731
Tru9I	TTAA	5 cut(s)	86, 270, 419, 1290, 1731
TseFI	GTSAC	1 cut(s)	1646
TseI	GCWGC	3 cut(s)	569, 662, 1169
Tsp45I	GTSAC	1 cut(s)	1646
TspDTI	ATGAA	3 cut(s)	327, 527, 1759
TspGWI	ACGGA	2 cut(s)	482, 1665
Van91I	CCANNNNNTGG	1 cut(s)	831
Vha464I	CTTAAG	1 cut(s)	1730
VpaK11BI	GGWCC	4 cut(s)	106, 354, 764, 1652
XagI	CCTNNNNNAGG	1 cut(s)	438
XapI	RAATTY	1 cut(s)	1691
XceI	RCATGY	2 cut(s)	331, 1356
XmnI	GAANNNNTTC	1 cut(s)	375
XspI	CTAG	1 cut(s)	1373

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.