RchiOBHm_Chr2g0136481

NB-ARC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0008875
Physical Location & Seq
Reverse (-)
53854395 .. 53859112
4718 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50727

Sequence Viewer

Length: 3093 bp
ATGGTAGGTGCCATTGATGCATTAGAGCAAGCATCTAGAAACTTAGATGAAGCTCCAAAGAGAATTCGAAGCCTAGAGGAATTTGTTTGTGATCTTGAGAACTTGATTCGACGACTAAAGCACAAGCATGTCAACAAACTTCATAATCCTCAGTTAGAACACCAAATCCAAAGCTTGAATTCCCTGATAGAACGTCTGCATCCAAACATCACCAAGGCCAGGAGAATGGTGTCAAAGAGTAAGATTAAGAACTTGGCTAAGGTAGTTTGGACTTCCATGGCTGGAGACCCACTGGGGAAGCTTGTGAACTCAATAAGGGATGACTTGAATTGGTGGCTTGAATCACAAAGATTGGTCCAGGATGTTGAGAAGACACTTGAGTCAACTGCAAAAGACGCCCGCGTTCGACTGAAAATTAGGACCGAACAAGGCTACCCAGTTTCTACTAAATGCTACTTTGTCAGGAATTTACTGGAAAAGAATGGTTCTCAACATGTCATTCTAATTGTTGGGTTATCTGGTATTGGGAAGTCATTTTTGGCTCGTCAAGTAGCCTCTGATCCCCCTGAGAAATTTATGGATGGTGCAGTTGAACTTGGCTTTGGCCAATGGTGCAGTAGAGCTGCTTGCAACAGAAGTATAGCTGAATACCAGAGGCGCTTGGCAAGAAAACTTTGTAAATTTCTGGTGCAGATTGGATTTTGGAAGAAGATCAGGGATGAATATAGTGGAGATCTAGAATATATATGTTGCTTGCTTCAAGAAGCCTTGTTTGGGAAGAGCATCCTTATACTTCTTGATGATGTTTGGGAGCAGGACATAGTTGAGCGGTTTGCAAAGCTATATGATAATGATTGCAGGTACCTTGTAACAACAAGAAATGAAGCTGTCTATGAAATTACAGAAGCAGAGAAGGTGGAATTAAGCAAAGATGACGTAAAGGAGACAAGCATGGAAGTTCTTCTCTACCATAGCCTCCTTAGCAAAGAAGAGCTACCGCAGGTAGCAGAGAACTTACTTGAGCGGTGCGGTCATCATCCTTTGACAGTTGCTGTTATGGGTAAGGCTCTCAGAAAAGAAACAAGAGCTGATCAATGGGAAAAGGCCATCACCAACTTATCCACATTTGCTACGTGTGCACCTGGTCCTGTATCATATGTCAATGAAAAAGAAGCTGAGAATGCTTTAACCATTTTTGGATCCTTCGAGTTCAGTCTAGATGCAATGCCTGGAGACTCTAGAGAGCTCTTCATAGCTTTGTCAGCTCTTGCATGGGCAGAACCTGTGCCAGAAGCTTGTGTGGAGGCTGTTTGGTCAGTTCTGGGGCAGGAGACCCTGTTCCCACTCATAGTCTGCAAGCTTGTAGAAGGCTCATTGCTGATGAAAATTGATACGGATCCCTTGTACTTGGTACATGACATGGTTGCTCTGTACCTTGACAGCAAGACAAACAATTCAGTCCAGATACTATTAAATGCATCCACAGCCGAAGAAGCAGCATTCATCTGCCCTTGGCTTCTTATATTTGGGAAAGAGAGAGTAAAAGATATTGCTGAAAAGAAAGTAGTGTCTTTCCTTGGTTCTTTTGAGGAAAAGCATGTGATTATCACCTTAAAGGCGACTATACAGGCTCTAATGGCTAGCAAGTCCATATCAGAACTTGAAGAAAGTAGAGCAAACTTTAGTAACTTATTGGGTCCTAGGACTGCAGACCTGATCTCCACTGAATCACAGAGCTTGATTGCTGTGTCTGCACAAGCCATCACCACTGTATTTAGCAAGAGTGACTATTGCAATTATTTTCCATCCCTTGAAGATACTGGTGCAGTCAGCAAGTTGGCTTGCATCTTAGAAAATTGTGATGACCCTGTGATCCAAACAGATATTTCAGTTGTTCTTGCAAAGCTTGCAGAATTTGGAAGCCAAGAGACGGTCGATAAGGTGCTTCAGAGCATTCAATTTCATCAGTTGGCAGAGTTGCTCTCTCCAAATAATGAGCAATGGCATGATAGTGTGTTTTCAATACTGATCTCATTGATGAAAGCTGGGAAATTAAAAGCTGTTGAGAGAATGCTTGCTTTTGAGATTGATAAGACTCTTCTTAGACTCCTACAGAATGGATCCGAAGTAGCTCAACACCATGCAATAGTTGCATTGAAGACATTTTATGAGTTGAGAGGCCCCCATCTGGTTGGATCTCTTGAACCCAAAAATATAAACCTTTTGCCATGGCAAGCTAGACATTGTTTGGAGCGATTTCTTTTGTTGGATCGAAGTGTTCCCCTTTTACCACAGCTGCAAACTTTTGAAGATCTTATTTATAAGGTACTACACAGTGATAGCAAGCTGGTATTGGAGGCAATGCAAGATCTAATACCAATCATAGAGAATGCAGGAGAACCAAGCATCAGAGACATGATTTTAGAAAGTCCCTTCATCAAACAACTCTCTGAACTCTTACAACGTGGAAGCTCTGAACATAATTCAACGAAATCTCAAGCTGCCTTTCTATTGATGAAGCTAGCTTCCTCTGGTGGGGAATCCTGCATTAAGAAGTTTCTTGAGTACGATATTATACCCGATCTAGTTAAGATGATGCAGTGCAGCACTATAGAGTTGCAGGATGCAGCCTATACAGCACTACACCAAATGCTTTTTGGAAGCAGCGGAGTTCTCGTTTTGAACCAAATCCTCCAGATGGGTCTCATAGAGAGGATGGCTCAATCACTGGAAAGCAAATCAATGAAGACCAGGGAAGTGAATGTGCACTGTTTTCTGGATATTGTGGAGCTCGGAAACAAAGCCTGCATCGAGCAAATGTTTTCACTGCAAGTGGTGGAGAAGCTTGTGAAAATAGAAAAGGCTAGTGGGGGAACTAGTGAAAAACTGCTTGGATTCATAAAGGGAATTGATAAATGTAAGCATCTATCTATGGCAGAGCGTAGAGTGATGAAACAACAAGTGGTTAGGAAGATAAGAGCTTCCCTTAAAGGCCATAAATTTGAGATCCAAATTTTGGGAGCTGTTGATGCTTGTGTATCTGAGGGCTCAAAAGTAGGTAGTAGCAGTAGAGGTAAACACAAAAGGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

1030

Amino Acids

115.61

Weight (kDa)

6.24

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 156 - 305 4.2e-14 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2322
AasI GACNNNNNNGTC 1 cut(s) 379
Acc36I ACCTGC 2 cut(s) 849, 991
Acc65I GGTACC 1 cut(s) 861
AccB1I GGYRCC 2 cut(s) 8, 861
AccB7I CCANNNNNTGG 1 cut(s) 3016
AccBSI CCGCTC 2 cut(s) 829, 1024
AccII CGCG 1 cut(s) 402
AciI CCGC 6 cut(s) 400, 829, 998, 1024, 1029, 2667
AcoI YGGCCR 1 cut(s) 604
AcsI RAATTY 9 cut(s) 63, 80, 178, 466, 572, 680, 1913, 2999, 3012
AcuI CTGAAG 1 cut(s) 1931
AcyI GRCGYC 1 cut(s) 396
AfaI GTAC 6 cut(s) 863, 1406, 1413, 1433, 2328, 2567
AfiI CCNNNNNNNGG 7 cut(s) 219, 774, 1930, 2188, 2535, 2698, 3016
AflIII ACRYGT 2 cut(s) 493, 1133
AhlI ACTAGT 1 cut(s) 2876
AjnI CCWGG 5 cut(s) 218, 357, 1141, 1228, 2750
AjuI GAANNNNNNNTTGG 8 cut(s) 521, 553, 585, 617, 756, 788, 2874, 2906
AloI GAACNNNNNNTCC 4 cut(s) 150, 182, 1322, 1354
Alw21I GWGCWC 4 cut(s) 1141, 1248, 2769, 2793
Alw26I GTCTC 7 cut(s) 279, 938, 1227, 1325, 1922, 2406, 2708
Alw44I GTGCAC 2 cut(s) 1137, 2765
AlwNI CAGNNNCTG 2 cut(s) 1052, 1283
AoxI GGCC 5 cut(s) 216, 604, 1104, 2179, 2992
ApaLI GTGCAC 2 cut(s) 1137, 2765
ApeKI GCWGC 7 cut(s) 623, 1496, 2296, 2501, 2604, 2627, 2664
ApoI RAATTY 9 cut(s) 63, 80, 178, 466, 572, 680, 1913, 2999, 3012
Asp700I GAANNNNTTC 1 cut(s) 960
Asp718I GGTACC 1 cut(s) 861
AspA2I CCTAGG 1 cut(s) 1700
AspLEI GCGC 1 cut(s) 660
AspS9I GGNCC 5 cut(s) 355, 420, 1145, 1697, 2180
AsuHPI GGTGA 4 cut(s) 202, 1102, 1600, 1756
AsuII TTCGAA 1 cut(s) 67
AsuNHI GCTAGC 2 cut(s) 1640, 2521
AvaII GGWCC 4 cut(s) 355, 420, 1145, 1697
AvrII CCTAGG 1 cut(s) 1700
BaeGI GKGCMC 2 cut(s) 1141, 2769
BalI TGGCCA 1 cut(s) 606
BamHI GGATCC 3 cut(s) 1199, 1396, 2120
BanI GGYRCC 2 cut(s) 8, 861
BanII GRGCYC 3 cut(s) 1248, 2793, 3050
BbsI GAAGAC 3 cut(s) 377, 2165, 2753
Bbv12I GWGCWC 4 cut(s) 1141, 1248, 2769, 2793
BbvI GCAGC 7 cut(s) 610, 1508, 2283, 2488, 2616, 2639, 2676
BccI CCATC 7 cut(s) 575, 1115, 1769, 1813, 2193, 2692, 2710
BciT130I CCWGG 5 cut(s) 220, 359, 1143, 1230, 2752
BclI TGATCA 1 cut(s) 1090
BcoDI GTCTC 7 cut(s) 279, 938, 1227, 1325, 1922, 2406, 2708
BcuI ACTAGT 1 cut(s) 2876
BfmI CTRYAG 3 cut(s) 1707, 2111, 2610
BfoI RGCGCY 1 cut(s) 661
BfuAI ACCTGC 2 cut(s) 849, 991
BglII AGATCT 3 cut(s) 733, 2311, 2368
BisI GCNGC 7 cut(s) 624, 1497, 2297, 2502, 2605, 2628, 2665
BlnI CCTAGG 1 cut(s) 1700
BlsI GCNGC 7 cut(s) 625, 1498, 2298, 2503, 2606, 2629, 2666
Bme1390I CCNGG 5 cut(s) 220, 359, 1143, 1230, 2752
Bme18I GGWCC 4 cut(s) 355, 420, 1145, 1697
BmgT120I GGNCC 5 cut(s) 355, 420, 1145, 1697, 2180
BmiI GGNNCC 7 cut(s) 10, 863, 1201, 1398, 1698, 2122, 2182
BmrFI CCNGG 5 cut(s) 220, 359, 1143, 1230, 2752
BmrI ACTGGG 2 cut(s) 302, 431
BmtI GCTAGC 2 cut(s) 1644, 2525
BmuI ACTGGG 2 cut(s) 302, 431
BpiI GAAGAC 3 cut(s) 377, 2165, 2753
BplI GAGNNNNNCTC 4 cut(s) 1967, 1999, 2704, 2736
BpmI CTGGAG 3 cut(s) 303, 1251, 2678
Bpu10I CCTNAGC 2 cut(s) 258, 980
Bpu14I TTCGAA 1 cut(s) 67
BpuEI CTTGAG 5 cut(s) 116, 398, 1040, 2481, 2582
BsaAI YACGTR 1 cut(s) 1134
BsaBI GATNNNNATC 1 cut(s) 1395
BsaHI GRCGYC 1 cut(s) 396
BsaI GGTCTC 3 cut(s) 279, 1325, 2708
BsaJI CCNNGG 7 cut(s) 213, 276, 1511, 1576, 1700, 2228, 2751
BsaXI ACNNNNNCTCC 6 cut(s) 1322, 1352, 1703, 1733, 2661, 2691
Bsc4I CCNNNNNNNGG 7 cut(s) 219, 774, 1930, 2188, 2535, 2698, 3016
Bse1I ACTGG 5 cut(s) 297, 437, 477, 1825, 2733
Bse3DI GCAATG 4 cut(s) 1230, 1373, 2006, 2367
Bse8I GATNNNNATC 1 cut(s) 1395
BseBI CCWGG 5 cut(s) 220, 359, 1143, 1230, 2752
BseDI CCNNGG 7 cut(s) 213, 276, 1511, 1576, 1700, 2228, 2751
BseJI GATNNNNATC 1 cut(s) 1395
BseLI CCNNNNNNNGG 7 cut(s) 219, 774, 1930, 2188, 2535, 2698, 3016
BseMI GCAATG 4 cut(s) 1230, 1373, 2006, 2367
BseMII CTCAG 5 cut(s) 164, 558, 1084, 1167, 3033
BseNI ACTGG 5 cut(s) 297, 437, 477, 1825, 2733
BseSI GKGCMC 2 cut(s) 1141, 2769
BseXI GCAGC 7 cut(s) 610, 1508, 2283, 2488, 2616, 2639, 2676
BseYI CCCAGC 1 cut(s) 2045
BsgI GTGCAG 6 cut(s) 606, 634, 710, 1737, 1845, 2623
Bsh1236I CGCG 1 cut(s) 402
Bsh1285I CGRYCG 1 cut(s) 1935
BshFI GGCC 5 cut(s) 218, 606, 1106, 2181, 2994
BshNI GGYRCC 2 cut(s) 8, 861
BsiEI CGRYCG 1 cut(s) 1935
BsiHKAI GWGCWC 4 cut(s) 1141, 1248, 2769, 2793
BslFI GGGAC 1 cut(s) 2415
BslI CCNNNNNNNGG 7 cut(s) 219, 774, 1930, 2188, 2535, 2698, 3016
BsmAI GTCTC 7 cut(s) 279, 938, 1227, 1325, 1922, 2406, 2708
BsmBI CGTCTC 1 cut(s) 1922
BsmFI GGGAC 1 cut(s) 2415
BsmI GAATGC 5 cut(s) 1186, 1499, 1953, 2076, 2395
BsnI GGCC 5 cut(s) 218, 606, 1106, 2181, 2994
Bso31I GGTCTC 3 cut(s) 279, 1325, 2708
Bsp119I TTCGAA 1 cut(s) 67
Bsp1286I GDGCHC 5 cut(s) 1141, 1248, 2769, 2793, 3050
Bsp19I CCATGG 2 cut(s) 276, 2228
BspACI CCGC 6 cut(s) 400, 829, 998, 1024, 1029, 2667
BspANI GGCC 5 cut(s) 218, 606, 1106, 2181, 2994
BspCNI CTCAG 5 cut(s) 163, 559, 1083, 1168, 3034
BspFNI CGCG 1 cut(s) 402
BspLI GGNNCC 7 cut(s) 10, 863, 1201, 1398, 1698, 2122, 2182
BspMAI CTGCAG 1 cut(s) 1711
BspMI ACCTGC 2 cut(s) 849, 991
BspOI GCTAGC 2 cut(s) 1644, 2525
BspQI GCTCTTC 3 cut(s) 773, 984, 1253
BspT104I TTCGAA 1 cut(s) 67
BspT107I GGYRCC 2 cut(s) 8, 861
BspTNI GGTCTC 3 cut(s) 279, 1325, 2708
BsrBI CCGCTC 2 cut(s) 829, 1024
BsrDI GCAATG 4 cut(s) 1230, 1373, 2006, 2367
BsrI ACTGG 5 cut(s) 297, 437, 477, 1825, 2733
BssECI CCNNGG 7 cut(s) 213, 276, 1511, 1576, 1700, 2228, 2751
BssNI GRCGYC 1 cut(s) 396
BssT1I CCWWGG 6 cut(s) 213, 276, 1511, 1576, 1700, 2228
Bst2UI CCWGG 5 cut(s) 220, 359, 1143, 1230, 2752
Bst4CI ACNGT 5 cut(s) 1048, 1771, 1933, 2336, 2771
Bst6I CTCTTC 4 cut(s) 773, 984, 1253, 2103
BstACI GRCGYC 1 cut(s) 396
BstAPI GCANNNNNTGC 2 cut(s) 1907, 2150
BstBAI YACGTR 1 cut(s) 1134
BstBI TTCGAA 1 cut(s) 67
BstDSI CCRYGG 2 cut(s) 276, 2228
BstFNI CGCG 1 cut(s) 402
BstH2I RGCGCY 1 cut(s) 661
BstHHI GCGC 1 cut(s) 660
BstMAI GTCTC 7 cut(s) 279, 938, 1227, 1325, 1922, 2406, 2708
BstMCI CGRYCG 1 cut(s) 1935
BstNI CCWGG 5 cut(s) 220, 359, 1143, 1230, 2752
BstNSI RCATGY 3 cut(s) 131, 497, 1601
BstSCI CCNGG 5 cut(s) 218, 357, 1141, 1228, 2750
BstSFI CTRYAG 3 cut(s) 1707, 2111, 2610
BstSLI GKGCMC 2 cut(s) 1141, 2769
BstUI CGCG 1 cut(s) 402
BstV1I GCAGC 7 cut(s) 610, 1508, 2283, 2488, 2616, 2639, 2676
BstV2I GAAGAC 3 cut(s) 377, 2165, 2753
BstX2I RGATCY 8 cut(s) 733, 1199, 1396, 2120, 2195, 2311, 2368, 3006
BstXI CCANNNNNNTGG 2 cut(s) 226, 2192
BstYI RGATCY 8 cut(s) 733, 1199, 1396, 2120, 2195, 2311, 2368, 3006
BsuRI GGCC 5 cut(s) 218, 606, 1106, 2181, 2994
BtgI CCRYGG 2 cut(s) 276, 2228
BtsI GCAGTG 2 cut(s) 2606, 2825
BtsIMutI CAGTG 8 cut(s) 290, 1722, 1767, 2341, 2606, 2726, 2767, 2825
BveI ACCTGC 2 cut(s) 849, 991
CaiI CAGNNNCTG 2 cut(s) 1052, 1283
CfoI GCGC 1 cut(s) 660
Cfr13I GGNCC 5 cut(s) 355, 420, 1145, 1697, 2180
CseI GACGC 1 cut(s) 404
CsiI ACCWGGT 1 cut(s) 1141
Csp6I GTAC 6 cut(s) 862, 1405, 1412, 1432, 2327, 2566
CviQI GTAC 6 cut(s) 862, 1405, 1412, 1432, 2327, 2566
DrdI GACNNNNNNGTC 1 cut(s) 379
DseDI GACNNNNNNGTC 1 cut(s) 379
EaeI YGGCCR 1 cut(s) 604
Eam1104I CTCTTC 4 cut(s) 773, 984, 1253, 2103
EarI CTCTTC 4 cut(s) 773, 984, 1253, 2103
Ecl136II GAGCTC 2 cut(s) 1246, 2791
Eco130I CCWWGG 6 cut(s) 213, 276, 1511, 1576, 1700, 2228
Eco24I GRGCYC 3 cut(s) 1248, 2793, 3050
Eco31I GGTCTC 3 cut(s) 279, 1325, 2708
Eco47I GGWCC 4 cut(s) 355, 420, 1145, 1697
Eco53kI GAGCTC 2 cut(s) 1246, 2791
Eco57I CTGAAG 1 cut(s) 1931
EcoICRI GAGCTC 2 cut(s) 1246, 2791
EcoO109I RGGNCCY 2 cut(s) 1697, 2180
EcoRI GAATTC 2 cut(s) 63, 178
EcoRII CCWGG 5 cut(s) 218, 357, 1141, 1228, 2750
EcoT14I CCWWGG 6 cut(s) 213, 276, 1511, 1576, 1700, 2228
EcoT22I ATGCAT 2 cut(s) 22, 1480
EcoT38I GRGCYC 3 cut(s) 1248, 2793, 3050
ErhI CCWWGG 6 cut(s) 213, 276, 1511, 1576, 1700, 2228
Esp3I CGTCTC 1 cut(s) 1922
FaqI GGGAC 1 cut(s) 2415
FauI CCCGC 1 cut(s) 407
FauNDI CATATG 1 cut(s) 1156
FbaI TGATCA 1 cut(s) 1090
Fnu4HI GCNGC 7 cut(s) 624, 1497, 2297, 2502, 2605, 2628, 2665
FriOI GRGCYC 3 cut(s) 1248, 2793, 3050
Fsp4HI GCNGC 7 cut(s) 624, 1497, 2297, 2502, 2605, 2628, 2665
GlaI GCGC 1 cut(s) 659
GluI GCNGC 7 cut(s) 624, 1497, 2297, 2502, 2605, 2628, 2665
GsaI CCCAGC 1 cut(s) 2049
GsuI CTGGAG 3 cut(s) 303, 1251, 2678
HaeII RGCGCY 1 cut(s) 661
HaeIII GGCC 5 cut(s) 218, 606, 1106, 2181, 2994
HgaI GACGC 1 cut(s) 404
HhaI GCGC 1 cut(s) 660
Hin1I GRCGYC 1 cut(s) 396
Hin6I GCGC 1 cut(s) 658
HinP1I GCGC 1 cut(s) 658
HincII GTYRAC 2 cut(s) 133, 384
HindII GTYRAC 2 cut(s) 133, 384
HindIII AAGCTT 6 cut(s) 172, 299, 1293, 1358, 1904, 2843
HinfI GANTC 9 cut(s) 106, 341, 380, 1235, 1727, 2095, 2106, 2540, 2895
HphI GGTGA 4 cut(s) 202, 1102, 1600, 1756
Hpy166II GTNNAC 6 cut(s) 133, 307, 384, 1139, 2767, 3077
Hpy8I GTNNAC 6 cut(s) 133, 307, 384, 1139, 2767, 3077
Hpy99I CGWCG 1 cut(s) 114
HpyAV CCTTC 4 cut(s) 907, 1213, 1361, 2443
HpyCH4III ACNGT 5 cut(s) 1048, 1771, 1933, 2336, 2771
HpyCH4IV ACGT 4 cut(s) 193, 936, 1133, 2464
HpySE526I ACGT 4 cut(s) 193, 936, 1133, 2464
Hsp92I GRCGYC 1 cut(s) 396
HspAI GCGC 1 cut(s) 658
KpnI GGTACC 1 cut(s) 865
Ksp22I TGATCA 1 cut(s) 1090
LguI GCTCTTC 3 cut(s) 773, 984, 1253
LmnI GCTCC 5 cut(s) 58, 811, 2251, 2788, 3020
Lsp1109I GCAGC 7 cut(s) 610, 1508, 2283, 2488, 2616, 2639, 2676
MabI ACCWGGT 1 cut(s) 1141
MaeII ACGT 4 cut(s) 193, 936, 1133, 2464
MaeIII GTNAC 3 cut(s) 868, 1685, 1784
MbiI CCGCTC 2 cut(s) 829, 1024
MflI RGATCY 8 cut(s) 733, 1199, 1396, 2120, 2195, 2311, 2368, 3006
MhlI GDGCHC 5 cut(s) 1141, 1248, 2769, 2793, 3050
MlsI TGGCCA 1 cut(s) 606
MluNI TGGCCA 1 cut(s) 606
MlyI GAGTC 4 cut(s) 389, 1229, 2089, 2100
MmeI TCCRAC 2 cut(s) 2173, 2247
Mox20I TGGCCA 1 cut(s) 606
Mph1103I ATGCAT 2 cut(s) 22, 1480
MroXI GAANNNNTTC 1 cut(s) 960
MscI TGGCCA 1 cut(s) 606
MseI TTAA 9 cut(s) 246, 923, 1187, 1472, 1613, 2054, 2550, 2589, 2988
MslI CAYNNNNRTG 2 cut(s) 126, 2010
Msp20I TGGCCA 1 cut(s) 606
MspA1I CMGCKG 2 cut(s) 2296, 2667
MspR9I CCNGG 5 cut(s) 220, 359, 1143, 1230, 2752
Mva1269I GAATGC 5 cut(s) 1186, 1499, 1953, 2076, 2395
MvaI CCWGG 5 cut(s) 220, 359, 1143, 1230, 2752
MvnI CGCG 1 cut(s) 402
NcoI CCATGG 2 cut(s) 276, 2228
NdeI CATATG 1 cut(s) 1156
NheI GCTAGC 2 cut(s) 1640, 2521
NlaIV GGNNCC 7 cut(s) 10, 863, 1201, 1398, 1698, 2122, 2182
NmuCI GTSAC 1 cut(s) 1784
NsiI ATGCAT 2 cut(s) 22, 1480
NspI RCATGY 3 cut(s) 131, 497, 1601
NspV TTCGAA 1 cut(s) 67
PciI ACATGT 1 cut(s) 493
PciSI GCTCTTC 3 cut(s) 773, 984, 1253
PctI GAATGC 5 cut(s) 1186, 1499, 1953, 2076, 2395
PdmI GAANNNNTTC 1 cut(s) 960
PfeI GAWTC 5 cut(s) 106, 341, 1727, 2540, 2895
PflMI CCANNNNNTGG 1 cut(s) 3016
PfoI TCCNGGA 1 cut(s) 357
PkrI GCNGC 7 cut(s) 625, 1498, 2298, 2503, 2606, 2629, 2666
PleI GAGTC 4 cut(s) 388, 1229, 2089, 2100
PpsI GAGTC 4 cut(s) 388, 1229, 2089, 2100
Ppu21I YACGTR 1 cut(s) 1134
PpuMI RGGWCCY 1 cut(s) 1697
PscI ACATGT 1 cut(s) 493
PsiI TTATAA 1 cut(s) 2322
Psp124BI GAGCTC 2 cut(s) 1248, 2793
Psp5II RGGWCCY 1 cut(s) 1697
Psp6I CCWGG 5 cut(s) 218, 357, 1141, 1228, 2750
PspFI CCCAGC 1 cut(s) 2045
PspGI CCWGG 5 cut(s) 218, 357, 1141, 1228, 2750
PspN4I GGNNCC 7 cut(s) 10, 863, 1201, 1398, 1698, 2122, 2182
PspPI GGNCC 5 cut(s) 355, 420, 1145, 1697, 2180
PspPPI RGGWCCY 1 cut(s) 1697
PstI CTGCAG 1 cut(s) 1711
PstNI CAGNNNCTG 2 cut(s) 1052, 1283
PsuI RGATCY 8 cut(s) 733, 1199, 1396, 2120, 2195, 2311, 2368, 3006
PvuII CAGCTG 1 cut(s) 2296
RsaI GTAC 6 cut(s) 863, 1406, 1413, 1433, 2328, 2567
RsaNI GTAC 6 cut(s) 862, 1405, 1412, 1432, 2327, 2566
RseI CAYNNNNRTG 2 cut(s) 126, 2010
SacI GAGCTC 2 cut(s) 1248, 2793
SapI GCTCTTC 3 cut(s) 773, 984, 1253
SaqAI TTAA 9 cut(s) 246, 923, 1187, 1472, 1613, 2054, 2550, 2589, 2988
SatI GCNGC 7 cut(s) 624, 1497, 2297, 2502, 2605, 2628, 2665
Sau96I GGNCC 5 cut(s) 355, 420, 1145, 1697, 2180
SchI GAGTC 4 cut(s) 389, 1229, 2089, 2100
ScrFI CCNGG 5 cut(s) 220, 359, 1143, 1230, 2752
SduI GDGCHC 5 cut(s) 1141, 1248, 2769, 2793, 3050
SexAI ACCWGGT 1 cut(s) 1141
SfcI CTRYAG 3 cut(s) 1707, 2111, 2610
SfuI TTCGAA 1 cut(s) 67
SinI GGWCC 4 cut(s) 355, 420, 1145, 1697
SmiMI CAYNNNNRTG 2 cut(s) 126, 2010
SmlI CTYRAG 5 cut(s) 95, 377, 1019, 2496, 2561
SmoI CTYRAG 5 cut(s) 95, 377, 1019, 2496, 2561
SpeI ACTAGT 1 cut(s) 2876
SsiI CCGC 6 cut(s) 400, 829, 998, 1024, 1029, 2667
SstI GAGCTC 2 cut(s) 1248, 2793
StyD4I CCNGG 5 cut(s) 218, 357, 1141, 1228, 2750
StyI CCWWGG 6 cut(s) 213, 276, 1511, 1576, 1700, 2228
TaaI ACNGT 5 cut(s) 1048, 1771, 1933, 2336, 2771
TaiI ACGT 4 cut(s) 196, 939, 1136, 2467
TaqI TCGA 7 cut(s) 67, 109, 406, 1206, 1935, 2272, 2811
TaqII GACCGA 1 cut(s) 437
TatI WGTACW 1 cut(s) 1404
TfiI GAWTC 5 cut(s) 106, 341, 1727, 2540, 2895
Tru1I TTAA 9 cut(s) 246, 923, 1187, 1472, 1613, 2054, 2550, 2589, 2988
Tru9I TTAA 9 cut(s) 246, 923, 1187, 1472, 1613, 2054, 2550, 2589, 2988
TscAI CASTG 8 cut(s) 297, 1729, 1774, 2341, 2606, 2733, 2774, 2832
TseFI GTSAC 1 cut(s) 1784
TseI GCWGC 7 cut(s) 623, 1496, 2296, 2501, 2604, 2627, 2664
Tsp45I GTSAC 1 cut(s) 1784
TspGWI ACGGA 1 cut(s) 1409
TspRI CASTG 8 cut(s) 297, 1729, 1774, 2341, 2606, 2733, 2774, 2832
Van91I CCANNNNNTGG 1 cut(s) 3016
VneI GTGCAC 2 cut(s) 1137, 2765
VpaK11BI GGWCC 4 cut(s) 355, 420, 1145, 1697
XapI RAATTY 9 cut(s) 63, 80, 178, 466, 572, 680, 1913, 2999, 3012
XbaI TCTAGA 4 cut(s) 35, 736, 1216, 1238
XceI RCATGY 3 cut(s) 131, 497, 1601
XcmI CCANNNNNNNNNTGG 1 cut(s) 2654
XmaJI CCTAGG 1 cut(s) 1700
XmnI GAANNNNTTC 1 cut(s) 960
Zsp2I ATGCAT 2 cut(s) 22, 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.