Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000040.1

Orthogroup ID

OG0008875

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 3633

Gene Structure 3632 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000040.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2667 bp

atggtaggtgccattgctgcattagagcaagcatctagaaacttagatgaagctccaaagagaattcgaagcctagaggaatttgtttgtgatcttgagaacttgattcgacgactaaagcacaagcatgtcaacaaacttcataatcctcagttagaacaccaaatccaaagcttgaattccctgatagaacgtctgcatccaaacatcaccaaggccaggagaatggtgtcaaagagtaagattaagaacttggctaaggtagtttggacttccatggctggagacccactggggaagcttgtgaactcaataagggatgacttgaattggtggcttgaatcacaaagattggtccaggatgttgagaagacacttgagtcaactgcaaaagacgcccgcgttcgactgaaaattaggaccgaacaaggctacccagtttctactaaatgctactttgtcaggaatttactggaaaagaatggttctcaacatgtcattctaattgttgggttatctggtattgggaagtcatttttggctcgtcaagtagcctctgatccccctgagaaatttatggatggtgcagttgaacttggctttggccaatggtgcagtagagctgcttgcaacagaagtatagctgaataccagaggcgcttggcaagaaaactttgtaaatttctggtgcagattggattttggaagaagatcagggatgaatatagtggagatctagaatatatatgttgcttgcttcaagaagccttgtttgggaagagcatccttatacttcttgatgatgtttgggagcaggacatagttgagcggtttgcaaagctatatgataatgattgcaggtaccttgtaacaacaagaaatgaagctgtctatgaaattacagaagcagagaaggtggaattaagcaaagatgacgtaaaggagacaagcatggaagttcttctctaccatagcctccttagcaaagaagagctaccgcaggtagcagagaacttacttgagcggtgcggtcatcatcctttgacagttgctgttatgggtaaggctctcagaaaagaaacaagagctgatcaatgggaaaaggccatcaccaacttatcgacatttgctacgtgtgcacctggtcctgtatcatatgtcaatgaaaaagaagctgagaatgctttaaccatttttggatccttcgagttcagtctagatgcaatgcctggagactctagagagctcttcatagctttgtcagctcttgcatgggcagaacctgtgccagaagcttgtgtggaggctgtttggtcagttctggggcaggagaccctgttcccactcatagtctgcaagcttgtagaaggctcattgctgatgaaaattgatacggatcccttgtacttggtacatgacatggttgctctgtaccttgacagcaagacaaacaattcagtccagatactattaaatgcatccacagccgaagaagcagcattcatctgcccttggcttcttatatttgggaaagagagagtaaaagatattgctgaaaagaaagtagggtctttccttggttcttttgaggaaaagcatgtgattatcaccttaaaggcgactatccaggctctaatggctagcaagtccatatcagaacttgaagaaagtagagcaaactttagtaacttattgggtcctaggactgcagacctgatctccactgaatcacagagcttgattgctgtgtctgcacaagccatcaccactgtatttagcaagagtgactattgcaattattttccatcccttgaagatactggtgcagtcagcaagttggcttgcatcttagaaaattgtgatgaccctgtgatccaaacagatatttcagttgttcttgcaaagcttgcagaatttggaagccaagagacggtcgataaggtgcttcagagcattcaatttcatcagttggcagagttgctctctccaaataatgagcaatggcatgatagtgtgttttcaatactgatctcattgatgaaagctgggaaattaaaagctgtggagagaatgcttgcttttgagattgataagactcttcttagactcctacagaatggatccgaagtagctcaacaccatgcaatagttgcattgaagacattttatgagttgagaggcccccatctggttggatctcttgaacccaaaaatataaaccttttgccatggcaagctagacattgtttggagcgatttcttttgttggatcgaagtgttccccttttaccacagctgcaaacttttgaagatcttatttataaggtactacacagtgatagcaagctggtattggaggcaatgcaagatctaataccaatcatagagaatgcaggagaaccaagcatcagagacatgattttagaaagtcccctcatcaaacaactctctgaactcttacaacgtggaagctctgaacataattcaacaaaatctcaagctgcctttctattgatgaagctagcttcctctggtggagaatcctgcattaagaagtttcttgagtacgatattatacccgatctaattaagatgatgcagtgcagcactatagagttgcaggatgcagcctatacagcactacaccaaatgctttttggaagcagc

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

889

Amino Acids

99.91

Weight (kDa)

5.61

Isoelectric Point (pI)

39.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008875)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g30240 FvH4_6g30241
prunus_persica	Prupe.3G081300_v2.0.a1 Prupe.3G081300_v2.0.a1 Prupe.3G081300_v2.0.a1 Prupe.3G081300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0136481
rosa_laevigata	RLG00000019535
rosa_multiflora	Rmu_co8277351.1_g000001 Rmu_co8287839.1_g000001 Rmu_ssc0000040.1_g000001
rosa_roxburghii	Rroxscaffold_2G00108250
rosa_rugosa	Rorug02G0331000 Rorug02G0331100 Rorug02G0331200
rosa_samantha	Rh2AG381900 Rh2AG382000 Rh2BG388600 Rh2CG368300 Rh2DG405100 Rh2DG405200 Rh2DG405300
rosa_wichuraiana	Rw2G031220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2322
AasI	GACNNNNNNGTC	1 cut(s)	379
Acc36I	ACCTGC	2 cut(s)	849, 991
Acc65I	GGTACC	1 cut(s)	861
AccB1I	GGYRCC	2 cut(s)	8, 861
AccBSI	CCGCTC	2 cut(s)	829, 1024
AccII	CGCG	1 cut(s)	402
AciI	CCGC	5 cut(s)	400, 829, 998, 1024, 1029
AcoI	YGGCCR	1 cut(s)	604
AcsI	RAATTY	7 cut(s)	63, 80, 178, 466, 572, 680, 1913
AcuI	CTGAAG	1 cut(s)	1931
AcyI	GRCGYC	1 cut(s)	396
AfaI	GTAC	6 cut(s)	863, 1406, 1413, 1433, 2328, 2567
AfiI	CCNNNNNNNGG	4 cut(s)	219, 774, 1930, 2188
AflIII	ACRYGT	2 cut(s)	493, 1133
AjnI	CCWGG	5 cut(s)	218, 357, 1141, 1228, 1626
AjuI	GAANNNNNNNTTGG	6 cut(s)	521, 553, 585, 617, 756, 788
AloI	GAACNNNNNNTCC	4 cut(s)	150, 182, 1322, 1354
Alw21I	GWGCWC	2 cut(s)	1141, 1248
Alw26I	GTCTC	6 cut(s)	279, 938, 1227, 1325, 1922, 2406
Alw44I	GTGCAC	1 cut(s)	1137
AlwNI	CAGNNNCTG	2 cut(s)	1052, 1283
AoxI	GGCC	4 cut(s)	216, 604, 1104, 2179
ApaLI	GTGCAC	1 cut(s)	1137
ApeKI	GCWGC	8 cut(s)	17, 623, 1496, 2296, 2501, 2604, 2627, 2664
ApoI	RAATTY	7 cut(s)	63, 80, 178, 466, 572, 680, 1913
Asp700I	GAANNNNTTC	1 cut(s)	960
Asp718I	GGTACC	1 cut(s)	861
AspA2I	CCTAGG	1 cut(s)	1700
AspLEI	GCGC	1 cut(s)	660
AspS9I	GGNCC	5 cut(s)	355, 420, 1145, 1697, 2180
AsuHPI	GGTGA	4 cut(s)	202, 1102, 1600, 1756
AsuII	TTCGAA	1 cut(s)	67
AsuNHI	GCTAGC	2 cut(s)	1640, 2521
AvaII	GGWCC	4 cut(s)	355, 420, 1145, 1697
AvrII	CCTAGG	1 cut(s)	1700
BaeGI	GKGCMC	1 cut(s)	1141
BalI	TGGCCA	1 cut(s)	606
BamHI	GGATCC	3 cut(s)	1199, 1396, 2120
BanI	GGYRCC	2 cut(s)	8, 861
BanII	GRGCYC	1 cut(s)	1248
BbsI	GAAGAC	2 cut(s)	377, 2165
Bbv12I	GWGCWC	2 cut(s)	1141, 1248
BbvI	GCAGC	7 cut(s)	4, 610, 1508, 2283, 2488, 2616, 2639
BccI	CCATC	5 cut(s)	575, 1115, 1769, 1813, 2193
BciT130I	CCWGG	5 cut(s)	220, 359, 1143, 1230, 1628
BclI	TGATCA	1 cut(s)	1090
BcoDI	GTCTC	6 cut(s)	279, 938, 1227, 1325, 1922, 2406
BfaI	CTAG	9 cut(s)	36, 74, 737, 1217, 1239, 1641, 1701, 2238, 2522
BfmI	CTRYAG	3 cut(s)	1707, 2111, 2610
BfoI	RGCGCY	1 cut(s)	661
BfuAI	ACCTGC	2 cut(s)	849, 991
BglII	AGATCT	3 cut(s)	733, 2311, 2368
BisI	GCNGC	8 cut(s)	18, 624, 1497, 2297, 2502, 2605, 2628, 2665
BlnI	CCTAGG	1 cut(s)	1700
BlsI	GCNGC	8 cut(s)	19, 625, 1498, 2298, 2503, 2606, 2629, 2666
Bme1390I	CCNGG	5 cut(s)	220, 359, 1143, 1230, 1628
Bme18I	GGWCC	4 cut(s)	355, 420, 1145, 1697
BmgT120I	GGNCC	5 cut(s)	355, 420, 1145, 1697, 2180
BmiI	GGNNCC	7 cut(s)	10, 863, 1201, 1398, 1698, 2122, 2182
BmrFI	CCNGG	5 cut(s)	220, 359, 1143, 1230, 1628
BmrI	ACTGGG	2 cut(s)	302, 431
BmsI	GCATC	9 cut(s)	41, 208, 792, 1210, 1487, 1854, 2415, 2586, 2614
BmtI	GCTAGC	2 cut(s)	1644, 2525
BmuI	ACTGGG	2 cut(s)	302, 431
BpiI	GAAGAC	2 cut(s)	377, 2165
BplI	GAGNNNNNCTC	2 cut(s)	1967, 1999
BpmI	CTGGAG	2 cut(s)	303, 1251
Bpu10I	CCTNAGC	2 cut(s)	258, 980
Bpu14I	TTCGAA	1 cut(s)	67
BpuEI	CTTGAG	5 cut(s)	116, 398, 1040, 2481, 2582
BsaAI	YACGTR	1 cut(s)	1134
BsaBI	GATNNNNATC	1 cut(s)	1395
BsaHI	GRCGYC	1 cut(s)	396
BsaI	GGTCTC	2 cut(s)	279, 1325
BsaJI	CCNNGG	6 cut(s)	213, 276, 1511, 1576, 1700, 2228
BsaXI	ACNNNNNCTCC	4 cut(s)	1322, 1352, 1703, 1733
Bsc4I	CCNNNNNNNGG	4 cut(s)	219, 774, 1930, 2188
Bse1I	ACTGG	4 cut(s)	297, 437, 477, 1825
Bse3DI	GCAATG	5 cut(s)	12, 1230, 1373, 2006, 2367
Bse8I	GATNNNNATC	1 cut(s)	1395
BseBI	CCWGG	5 cut(s)	220, 359, 1143, 1230, 1628
BseDI	CCNNGG	6 cut(s)	213, 276, 1511, 1576, 1700, 2228
BseJI	GATNNNNATC	1 cut(s)	1395
BseLI	CCNNNNNNNGG	4 cut(s)	219, 774, 1930, 2188
BseMI	GCAATG	5 cut(s)	12, 1230, 1373, 2006, 2367
BseMII	CTCAG	4 cut(s)	164, 558, 1084, 1167
BseNI	ACTGG	4 cut(s)	297, 437, 477, 1825
BseSI	GKGCMC	1 cut(s)	1141
BseXI	GCAGC	7 cut(s)	4, 610, 1508, 2283, 2488, 2616, 2639
BseYI	CCCAGC	1 cut(s)	2045
BsgI	GTGCAG	6 cut(s)	606, 634, 710, 1737, 1845, 2623
Bsh1236I	CGCG	1 cut(s)	402
Bsh1285I	CGRYCG	1 cut(s)	1935
BshFI	GGCC	4 cut(s)	218, 606, 1106, 2181
BshNI	GGYRCC	2 cut(s)	8, 861
BsiEI	CGRYCG	1 cut(s)	1935
BsiHKAI	GWGCWC	2 cut(s)	1141, 1248
BslFI	GGGAC	1 cut(s)	2415
BslI	CCNNNNNNNGG	4 cut(s)	219, 774, 1930, 2188
BsmAI	GTCTC	6 cut(s)	279, 938, 1227, 1325, 1922, 2406
BsmBI	CGTCTC	1 cut(s)	1922
BsmFI	GGGAC	1 cut(s)	2415
BsmI	GAATGC	5 cut(s)	1186, 1499, 1953, 2076, 2395
BsnI	GGCC	4 cut(s)	218, 606, 1106, 2181
Bso31I	GGTCTC	2 cut(s)	279, 1325
Bsp119I	TTCGAA	1 cut(s)	67
Bsp1286I	GDGCHC	2 cut(s)	1141, 1248
Bsp19I	CCATGG	2 cut(s)	276, 2228
BspACI	CCGC	5 cut(s)	400, 829, 998, 1024, 1029
BspANI	GGCC	4 cut(s)	218, 606, 1106, 2181
BspCNI	CTCAG	4 cut(s)	163, 559, 1083, 1168
BspFNI	CGCG	1 cut(s)	402
BspLI	GGNNCC	7 cut(s)	10, 863, 1201, 1398, 1698, 2122, 2182
BspMAI	CTGCAG	1 cut(s)	1711
BspMI	ACCTGC	2 cut(s)	849, 991
BspOI	GCTAGC	2 cut(s)	1644, 2525
BspQI	GCTCTTC	3 cut(s)	773, 984, 1253
BspT104I	TTCGAA	1 cut(s)	67
BspT107I	GGYRCC	2 cut(s)	8, 861
BspTNI	GGTCTC	2 cut(s)	279, 1325
BsrBI	CCGCTC	2 cut(s)	829, 1024
BsrDI	GCAATG	5 cut(s)	12, 1230, 1373, 2006, 2367
BsrI	ACTGG	4 cut(s)	297, 437, 477, 1825
BssECI	CCNNGG	6 cut(s)	213, 276, 1511, 1576, 1700, 2228
BssNI	GRCGYC	1 cut(s)	396
BssT1I	CCWWGG	6 cut(s)	213, 276, 1511, 1576, 1700, 2228
Bst2UI	CCWGG	5 cut(s)	220, 359, 1143, 1230, 1628
Bst4CI	ACNGT	4 cut(s)	1048, 1771, 1933, 2336
Bst6I	CTCTTC	4 cut(s)	773, 984, 1253, 2103
BstACI	GRCGYC	1 cut(s)	396
BstAPI	GCANNNNNTGC	2 cut(s)	1907, 2150
BstBAI	YACGTR	1 cut(s)	1134
BstBI	TTCGAA	1 cut(s)	67
BstDEI	CTNAG	9 cut(s)	43, 150, 258, 567, 980, 1070, 1176, 1849, 2102
BstDSI	CCRYGG	2 cut(s)	276, 2228
BstFNI	CGCG	1 cut(s)	402
BstH2I	RGCGCY	1 cut(s)	661
BstHHI	GCGC	1 cut(s)	660
BstMAI	GTCTC	6 cut(s)	279, 938, 1227, 1325, 1922, 2406
BstMCI	CGRYCG	1 cut(s)	1935
BstNI	CCWGG	5 cut(s)	220, 359, 1143, 1230, 1628
BstNSI	RCATGY	3 cut(s)	131, 497, 1601
BstSCI	CCNGG	5 cut(s)	218, 357, 1141, 1228, 1626
BstSFI	CTRYAG	3 cut(s)	1707, 2111, 2610
BstSLI	GKGCMC	1 cut(s)	1141
BstUI	CGCG	1 cut(s)	402
BstV1I	GCAGC	7 cut(s)	4, 610, 1508, 2283, 2488, 2616, 2639
BstV2I	GAAGAC	2 cut(s)	377, 2165
BstX2I	RGATCY	7 cut(s)	733, 1199, 1396, 2120, 2195, 2311, 2368
BstXI	CCANNNNNNTGG	2 cut(s)	226, 2192
BstYI	RGATCY	7 cut(s)	733, 1199, 1396, 2120, 2195, 2311, 2368
BsuRI	GGCC	4 cut(s)	218, 606, 1106, 2181
BtgI	CCRYGG	2 cut(s)	276, 2228
BtsI	GCAGTG	1 cut(s)	2606
BtsIMutI	CAGTG	5 cut(s)	290, 1722, 1767, 2341, 2606
BveI	ACCTGC	2 cut(s)	849, 991
CaiI	CAGNNNCTG	2 cut(s)	1052, 1283
CfoI	GCGC	1 cut(s)	660
Cfr13I	GGNCC	5 cut(s)	355, 420, 1145, 1697, 2180
CseI	GACGC	1 cut(s)	404
CsiI	ACCWGGT	1 cut(s)	1141
Csp6I	GTAC	6 cut(s)	862, 1405, 1412, 1432, 2327, 2566
CviQI	GTAC	6 cut(s)	862, 1405, 1412, 1432, 2327, 2566
DdeI	CTNAG	9 cut(s)	43, 150, 258, 567, 980, 1070, 1176, 1849, 2102
DrdI	GACNNNNNNGTC	1 cut(s)	379
DseDI	GACNNNNNNGTC	1 cut(s)	379
EaeI	YGGCCR	1 cut(s)	604
Eam1104I	CTCTTC	4 cut(s)	773, 984, 1253, 2103
EarI	CTCTTC	4 cut(s)	773, 984, 1253, 2103
Ecl136II	GAGCTC	1 cut(s)	1246
Eco130I	CCWWGG	6 cut(s)	213, 276, 1511, 1576, 1700, 2228
Eco24I	GRGCYC	1 cut(s)	1248
Eco31I	GGTCTC	2 cut(s)	279, 1325
Eco47I	GGWCC	4 cut(s)	355, 420, 1145, 1697
Eco53kI	GAGCTC	1 cut(s)	1246
Eco57I	CTGAAG	1 cut(s)	1931
EcoICRI	GAGCTC	1 cut(s)	1246
EcoO109I	RGGNCCY	2 cut(s)	1697, 2180
EcoRI	GAATTC	2 cut(s)	63, 178
EcoRII	CCWGG	5 cut(s)	218, 357, 1141, 1228, 1626
EcoT14I	CCWWGG	6 cut(s)	213, 276, 1511, 1576, 1700, 2228
EcoT22I	ATGCAT	1 cut(s)	1480
EcoT38I	GRGCYC	1 cut(s)	1248
ErhI	CCWWGG	6 cut(s)	213, 276, 1511, 1576, 1700, 2228
Esp3I	CGTCTC	1 cut(s)	1922
FaqI	GGGAC	1 cut(s)	2415
FauI	CCCGC	1 cut(s)	407
FauNDI	CATATG	1 cut(s)	1156
FbaI	TGATCA	1 cut(s)	1090
Fnu4HI	GCNGC	8 cut(s)	18, 624, 1497, 2297, 2502, 2605, 2628, 2665
FriOI	GRGCYC	1 cut(s)	1248
Fsp4HI	GCNGC	8 cut(s)	18, 624, 1497, 2297, 2502, 2605, 2628, 2665
FspBI	CTAG	9 cut(s)	36, 74, 737, 1217, 1239, 1641, 1701, 2238, 2522
GlaI	GCGC	1 cut(s)	659
GluI	GCNGC	8 cut(s)	18, 624, 1497, 2297, 2502, 2605, 2628, 2665
GsaI	CCCAGC	1 cut(s)	2049
GsuI	CTGGAG	2 cut(s)	303, 1251
HaeII	RGCGCY	1 cut(s)	661
HaeIII	GGCC	4 cut(s)	218, 606, 1106, 2181
HgaI	GACGC	1 cut(s)	404
HhaI	GCGC	1 cut(s)	660
Hin1I	GRCGYC	1 cut(s)	396
Hin6I	GCGC	1 cut(s)	658
HinP1I	GCGC	1 cut(s)	658
HincII	GTYRAC	2 cut(s)	133, 384
HindII	GTYRAC	2 cut(s)	133, 384
HindIII	AAGCTT	5 cut(s)	172, 299, 1293, 1358, 1904
HinfI	GANTC	8 cut(s)	106, 341, 380, 1235, 1727, 2095, 2106, 2540
HphI	GGTGA	4 cut(s)	202, 1102, 1600, 1756
Hpy166II	GTNNAC	4 cut(s)	133, 307, 384, 1139
Hpy188I	TCNGA	8 cut(s)	559, 1073, 1657, 1950, 2125, 2411, 2452, 2476
Hpy8I	GTNNAC	4 cut(s)	133, 307, 384, 1139
Hpy99I	CGWCG	1 cut(s)	114
HpyAV	CCTTC	3 cut(s)	907, 1213, 1361
HpyCH4III	ACNGT	4 cut(s)	1048, 1771, 1933, 2336
HpyCH4IV	ACGT	4 cut(s)	193, 936, 1133, 2464
HpyF3I	CTNAG	9 cut(s)	43, 150, 258, 567, 980, 1070, 1176, 1849, 2102
HpySE526I	ACGT	4 cut(s)	193, 936, 1133, 2464
Hsp92I	GRCGYC	1 cut(s)	396
HspAI	GCGC	1 cut(s)	658
KpnI	GGTACC	1 cut(s)	865
Ksp22I	TGATCA	1 cut(s)	1090
LguI	GCTCTTC	3 cut(s)	773, 984, 1253
LmnI	GCTCC	3 cut(s)	58, 811, 2251
Lsp1109I	GCAGC	7 cut(s)	4, 610, 1508, 2283, 2488, 2616, 2639
LweI	GCATC	9 cut(s)	41, 208, 792, 1210, 1487, 1854, 2415, 2586, 2614
MabI	ACCWGGT	1 cut(s)	1141
MaeI	CTAG	9 cut(s)	36, 74, 737, 1217, 1239, 1641, 1701, 2238, 2522
MaeII	ACGT	4 cut(s)	193, 936, 1133, 2464
MaeIII	GTNAC	3 cut(s)	868, 1685, 1784
MbiI	CCGCTC	2 cut(s)	829, 1024
MflI	RGATCY	7 cut(s)	733, 1199, 1396, 2120, 2195, 2311, 2368
MhlI	GDGCHC	2 cut(s)	1141, 1248
MlsI	TGGCCA	1 cut(s)	606
MluNI	TGGCCA	1 cut(s)	606
MlyI	GAGTC	4 cut(s)	389, 1229, 2089, 2100
MmeI	TCCRAC	2 cut(s)	2173, 2247
Mox20I	TGGCCA	1 cut(s)	606
Mph1103I	ATGCAT	1 cut(s)	1480
MroXI	GAANNNNTTC	1 cut(s)	960
MscI	TGGCCA	1 cut(s)	606
MseI	TTAA	8 cut(s)	246, 923, 1187, 1472, 1613, 2054, 2550, 2589
MslI	CAYNNNNRTG	2 cut(s)	126, 2010
Msp20I	TGGCCA	1 cut(s)	606
MspA1I	CMGCKG	1 cut(s)	2296
MspR9I	CCNGG	5 cut(s)	220, 359, 1143, 1230, 1628
Mva1269I	GAATGC	5 cut(s)	1186, 1499, 1953, 2076, 2395
MvaI	CCWGG	5 cut(s)	220, 359, 1143, 1230, 1628
MvnI	CGCG	1 cut(s)	402
NcoI	CCATGG	2 cut(s)	276, 2228
NdeI	CATATG	1 cut(s)	1156
NheI	GCTAGC	2 cut(s)	1640, 2521
NlaIV	GGNNCC	7 cut(s)	10, 863, 1201, 1398, 1698, 2122, 2182
NmuCI	GTSAC	1 cut(s)	1784
NsiI	ATGCAT	1 cut(s)	1480
NspI	RCATGY	3 cut(s)	131, 497, 1601
NspV	TTCGAA	1 cut(s)	67
PciI	ACATGT	1 cut(s)	493
PciSI	GCTCTTC	3 cut(s)	773, 984, 1253
PctI	GAATGC	5 cut(s)	1186, 1499, 1953, 2076, 2395
PdmI	GAANNNNTTC	1 cut(s)	960
PfeI	GAWTC	4 cut(s)	106, 341, 1727, 2540
PfoI	TCCNGGA	1 cut(s)	357
PkrI	GCNGC	8 cut(s)	19, 625, 1498, 2298, 2503, 2606, 2629, 2666
PleI	GAGTC	4 cut(s)	388, 1229, 2089, 2100
PpsI	GAGTC	4 cut(s)	388, 1229, 2089, 2100
Ppu21I	YACGTR	1 cut(s)	1134
PpuMI	RGGWCCY	1 cut(s)	1697
PscI	ACATGT	1 cut(s)	493
PsiI	TTATAA	1 cut(s)	2322
Psp124BI	GAGCTC	1 cut(s)	1248
Psp5II	RGGWCCY	1 cut(s)	1697
Psp6I	CCWGG	5 cut(s)	218, 357, 1141, 1228, 1626
PspFI	CCCAGC	1 cut(s)	2045
PspGI	CCWGG	5 cut(s)	218, 357, 1141, 1228, 1626
PspN4I	GGNNCC	7 cut(s)	10, 863, 1201, 1398, 1698, 2122, 2182
PspPI	GGNCC	5 cut(s)	355, 420, 1145, 1697, 2180
PspPPI	RGGWCCY	1 cut(s)	1697
PstI	CTGCAG	1 cut(s)	1711
PstNI	CAGNNNCTG	2 cut(s)	1052, 1283
PsuI	RGATCY	7 cut(s)	733, 1199, 1396, 2120, 2195, 2311, 2368
PvuII	CAGCTG	1 cut(s)	2296
RsaI	GTAC	6 cut(s)	863, 1406, 1413, 1433, 2328, 2567
RsaNI	GTAC	6 cut(s)	862, 1405, 1412, 1432, 2327, 2566
RseI	CAYNNNNRTG	2 cut(s)	126, 2010
SacI	GAGCTC	1 cut(s)	1248
SapI	GCTCTTC	3 cut(s)	773, 984, 1253
SaqAI	TTAA	8 cut(s)	246, 923, 1187, 1472, 1613, 2054, 2550, 2589
SatI	GCNGC	8 cut(s)	18, 624, 1497, 2297, 2502, 2605, 2628, 2665
Sau96I	GGNCC	5 cut(s)	355, 420, 1145, 1697, 2180
SchI	GAGTC	4 cut(s)	389, 1229, 2089, 2100
ScrFI	CCNGG	5 cut(s)	220, 359, 1143, 1230, 1628
SduI	GDGCHC	2 cut(s)	1141, 1248
SexAI	ACCWGGT	1 cut(s)	1141
SfaNI	GCATC	9 cut(s)	41, 208, 792, 1210, 1487, 1854, 2415, 2586, 2614
SfcI	CTRYAG	3 cut(s)	1707, 2111, 2610
SfuI	TTCGAA	1 cut(s)	67
SinI	GGWCC	4 cut(s)	355, 420, 1145, 1697
SmiMI	CAYNNNNRTG	2 cut(s)	126, 2010
SmlI	CTYRAG	5 cut(s)	95, 377, 1019, 2496, 2561
SmoI	CTYRAG	5 cut(s)	95, 377, 1019, 2496, 2561
SsiI	CCGC	5 cut(s)	400, 829, 998, 1024, 1029
SspMI	CTAG	9 cut(s)	36, 74, 737, 1217, 1239, 1641, 1701, 2238, 2522
SstI	GAGCTC	1 cut(s)	1248
StyD4I	CCNGG	5 cut(s)	218, 357, 1141, 1228, 1626
StyI	CCWWGG	6 cut(s)	213, 276, 1511, 1576, 1700, 2228
TaaI	ACNGT	4 cut(s)	1048, 1771, 1933, 2336
TaiI	ACGT	4 cut(s)	196, 939, 1136, 2467
TaqI	TCGA	7 cut(s)	67, 109, 406, 1121, 1206, 1935, 2272
TaqII	GACCGA	1 cut(s)	437
TatI	WGTACW	1 cut(s)	1404
TfiI	GAWTC	4 cut(s)	106, 341, 1727, 2540
Tru1I	TTAA	8 cut(s)	246, 923, 1187, 1472, 1613, 2054, 2550, 2589
Tru9I	TTAA	8 cut(s)	246, 923, 1187, 1472, 1613, 2054, 2550, 2589
TscAI	CASTG	5 cut(s)	297, 1729, 1774, 2341, 2606
TseFI	GTSAC	1 cut(s)	1784
TseI	GCWGC	8 cut(s)	17, 623, 1496, 2296, 2501, 2604, 2627, 2664
Tsp45I	GTSAC	1 cut(s)	1784
TspGWI	ACGGA	1 cut(s)	1409
TspRI	CASTG	5 cut(s)	297, 1729, 1774, 2341, 2606
VneI	GTGCAC	1 cut(s)	1137
VpaK11BI	GGWCC	4 cut(s)	355, 420, 1145, 1697
XapI	RAATTY	7 cut(s)	63, 80, 178, 466, 572, 680, 1913
XbaI	TCTAGA	4 cut(s)	35, 736, 1216, 1238
XceI	RCATGY	3 cut(s)	131, 497, 1601
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2654
XmaJI	CCTAGG	1 cut(s)	1700
XmnI	GAANNNNTTC	1 cut(s)	960
XspI	CTAG	9 cut(s)	36, 74, 737, 1217, 1239, 1641, 1701, 2238, 2522
Zsp2I	ATGCAT	1 cut(s)	1480

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.