RLG00000019535

NB-ARC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0008875
Physical Location & Seq
Reverse (-)
53250412 .. 53254292
3881 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019535

Sequence Viewer

Length: 3093 bp
ATGGTAGGTGCCATTGCTGCATTAGAGCAAGCATCTAGAAACTTAGATGAAGCTCCAAAGAGAATTCGAAGTCTAGAGGAATTTGTTTGTGATCTTGAGAACTTGATTCGACGACTAAAGCACAAGCATGTCAACAAACTTCATAATCCACAGTTAGAACACCAAATCCAAAGTTTGAATTCCCTGATAGAACGTCTGCATCCAAACATCACCAAGGCCAGGAGAATGGTGTCAAAGAGTAAGATTAAGAACTTGGCTAAGGTAGTTTGGACTTCCATGGCTGGAGACCCACTGGGGAAGCTTGTGAACTCAATAAGGGATGACTTGAATTGGTGGCTTGAATCACAAAGGTTGGTCCAGGATGTTGAGAAGACACTTGAGTCAACTGCAAAAGACACCCGTGTTCGACTGAAAATTAGGACCGAACAAGGCTACCCAGTTTCTAGTAAATGCTACTTTGTCAGGAATTTACTGGAAAAGAATGGTTCTCAACGTGTCATTCTAATTGTTGGGTTATCTGGTATTGGGAAGTCATTTTTGGCTCGTCAAGTAGCTTCTGATCCCCCTGAGAAATTTATGGATGGTGCAGTTGAACTTGGCTTTGGCCAATGGTGCAGTAGAGCTGCTTGCAACAAAAGTATAGCTGAATACCAGAGGCGCTTGGCAAGAAAACTTTGTAAATTTCTGGTGCGGATTGGATTTTGGAAGAAGATCAGGGATGAATATATTGGAGATCTAGAATATATATGTTGCTTGCTTCAAGAAGCCTTGTATGGGAAGAGCATCCTTATACTTCTTGATGATGTTTGGGAGCAGGACATAGTTGAGCGGTTTGCAAAGCTATATGATAATGATTGCAGTTACCTTGTAACAACAAGAAATGAAGCTGTCTATGAAATTACAGAAGCAGAGAAGGTGGAATTAAGCAAAGATGACGTAAAGGAGACAAGCATGGAAGTTCTTCTCTACCATAGCCTCCTTAGCAAGGAAGAGCTACCGCAGGTAGCAGAGAACTTACTTGAGCGCTGCGGTCACCATCCTTTGACAGTTGCTGTTATGGGTAAGGCTCTCAGAAAAGAAACAAGAGCTGATAAATGGGAAAAGGCCATCACCAACTTATCCACATTTGCTACATGTGCACCTGGTCCTGTATCATATGTCAATGAAAAAGAAGCTGAGAATGCTTTAACCATTTTTGGATCCTTTGAGTTCAGTCTAGATGCAATGCCTGGAGACTCTAGAGAGCTCTTCATAGCTTTGTCAGCTCTTGCATGGGCAGAACCTGTGCCAGAAGCTTGTGTGGAGGCTGTTTGGTCAGTTCTGGGGCAGGAGAGCCTGTTCGCCCTCATAGTTTGCAAGCTTGTAGAAGGTTCATTGCTGATGAAAATTGATGCAGATCCCTTGTACTTAGTACATGACATGGTTGCTTTGTACCTTGACAGCAAGACAAACAATTCAGTCCAGATACTACTGAATGCATCCACAGCCGAAGAAGCAGCATTCATCTGCCCTTGGCTTCTTATATTTGGGAAAGAGAGAGTGAAAGATATTGCTGAAAAGAGAATCGTGTCTTTCCTTGGTTCTTTTGAGGAAAAGCATGTGATTATCACCTTAAAGGCGACTATCCAGGCTCTAATGGCTAGCAAGTCCATATCAGAACTTGAAGAAAGTAGAGCAAACTTTAGTAGCTTATTGGGTCCTAGGACTACAGACCTGATCTCCACTGAATCACAGAGCTTGATTGCTGTGTCTGCACAAGCCATCACCACTGTATTTAGCAAGAGTGACTATTGCAATTATTTTCCATCCCTTGAATATACTGGTGCAGTCAGCAAGTTGGCTTGCATCTTAGAAAAGTGTGATGACCCTGTGATCCAAACAGATATTTCAGTTGTTCTTGCAAAGCTTTCAGAATTTGGAAGCCAAGAGACGGTCGATAAGGTGCTTCAGAGCATTCAATTTCATCAGTTGGCAGAGTTGCTCTGTCCAAATAATGAGCAATGGCATGATAGTGTGTTTTCAATACTGATCTCATTGATGAAAGCTGGGAAATCAAAAGCTGTGGAGAGAATGCTTGCTTTTGAGATTGATAAGACTCTTCTTAGACTCCTACAGAATGGATCCGAAGTAGCTCAACACCATGCAACAGTTGCATTGAAGACATTTTATGAGTTGAGAGGCCCCCATCTGGTTGGATCTCTTGAACCCAAAAATATAAACCTTCTGCCATGGCAAGCTAGACATTGTTTGGAGAGATTTCTTTTGTTGGATCAAAGTGTTCCCCTTTTACCACAGCTGCAAACTTTTGAAGATCTTATTTATAAGGTACTACACAGTGATAGCAAGCTGGTATTGGAGGCAATGCAAGATCTAATACCAATCATTGAGAATGCAGGAGAACCAAGCATCAGAGACATGATTTTAGAAAGTCCCCTCATCAAACAACTCTCTGAACTCTTGCAACGTGGAAGCTCTGAACATAATTCAGTGAAATCTCAAGCTGCCTTTCTATTGATGAAGCTAGCTTCCTCTGGTGGGGAATCCTGCATTAAGAAGTTTCTTGAGTACGATATTATACCCGATCTAGTTAAGATGATGCAGTGCAGCACTATAGAGTTGCAGGATGCAGCCTATACAGCACTACACCAAATGCTTTTTGGAAGCAGCGGAGTTCTCGTTTTAAACCAAATCCTCCAGATGGGTCTCATAGAGAGGATGGCTCAATCACTGGAAAGCAAATCAACGAAGACCAGGGAAGTGAATGTGCACTGTTTTCTGGATATTGTGGAGCTCGGAAACAAAGCCTGCATCGAGCAAATGTTTTCACTGCAAGTGGTGGAGAAGCTTGTGAAAATAGAAAAGGCTAGTGGGGGAACTAGTGAAAAACTGCTTGGATTCATAAAGGGAATTGATAAATGTAAGCATCTATCTATGGCAGAGCGTAGAGTGATGAAACAACAAGTGGTTAGGAAGATAAGGGCTTCCCTTAAAGGCCATAAATTTGAGTTTCAAATTTTGGGAGCTGTTGATGCTTGTGTATCTGAGGGCTCAAAAGTAGGTAGTAGCAGTAGAGGTAAACACAAAAGGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

1031

Amino Acids

115.54

Weight (kDa)

6.49

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 156 - 305 1.5e-13 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2322
AasI GACNNNNNNGTC 1 cut(s) 379
Acc36I ACCTGC 1 cut(s) 991
AccB1I GGYRCC 1 cut(s) 8
AccBSI CCGCTC 1 cut(s) 829
AciI CCGC 5 cut(s) 691, 829, 998, 1029, 2667
AclWI GGATC 9 cut(s) 554, 1194, 1207, 1391, 1867, 2115, 2128, 2203, 2277
AcoI YGGCCR 1 cut(s) 604
AcsI RAATTY 9 cut(s) 63, 80, 178, 466, 572, 680, 1913, 2999, 3012
AcuI CTGAAG 1 cut(s) 1931
AfaI GTAC 5 cut(s) 1406, 1413, 1433, 2328, 2567
AfeI AGCGCT 1 cut(s) 1025
AfiI CCNNNNNNNGG 7 cut(s) 219, 774, 985, 1930, 2188, 2535, 2698
AflIII ACRYGT 2 cut(s) 493, 1133
AhlI ACTAGT 1 cut(s) 2876
AjnI CCWGG 6 cut(s) 218, 357, 1141, 1228, 1626, 2750
AjuI GAANNNNNNNTTGG 6 cut(s) 521, 553, 585, 617, 2874, 2906
AloI GAACNNNNNNTCC 4 cut(s) 150, 182, 1322, 1354
Alw21I GWGCWC 4 cut(s) 1141, 1248, 2769, 2793
Alw26I GTCTC 6 cut(s) 279, 938, 1227, 1922, 2406, 2708
Alw44I GTGCAC 2 cut(s) 1137, 2765
AlwI GGATC 9 cut(s) 554, 1194, 1207, 1391, 1867, 2115, 2128, 2203, 2277
AlwNI CAGNNNCTG 2 cut(s) 1052, 1283
Aor51HI AGCGCT 1 cut(s) 1025
AoxI GGCC 5 cut(s) 216, 604, 1104, 2179, 2992
ApaLI GTGCAC 2 cut(s) 1137, 2765
ApeKI GCWGC 9 cut(s) 17, 623, 1026, 1496, 2296, 2501, 2604, 2627, 2664
ApoI RAATTY 9 cut(s) 63, 80, 178, 466, 572, 680, 1913, 2999, 3012
Asp700I GAANNNNTTC 1 cut(s) 960
AspA2I CCTAGG 1 cut(s) 1700
AspLEI GCGC 2 cut(s) 660, 1026
AspS9I GGNCC 5 cut(s) 355, 420, 1145, 1697, 2180
AsuHPI GGTGA 5 cut(s) 202, 1025, 1102, 1600, 1756
AsuII TTCGAA 1 cut(s) 67
AsuNHI GCTAGC 2 cut(s) 1640, 2521
AvaII GGWCC 4 cut(s) 355, 420, 1145, 1697
AvrII CCTAGG 1 cut(s) 1700
BaeGI GKGCMC 2 cut(s) 1141, 2769
BalI TGGCCA 1 cut(s) 606
BamHI GGATCC 2 cut(s) 1199, 2120
BanI GGYRCC 1 cut(s) 8
BanII GRGCYC 3 cut(s) 1248, 2793, 3050
BbsI GAAGAC 3 cut(s) 377, 2165, 2753
Bbv12I GWGCWC 4 cut(s) 1141, 1248, 2769, 2793
BbvI GCAGC 9 cut(s) 4, 610, 1013, 1508, 2283, 2488, 2616, 2639, 2676
BccI CCATC 8 cut(s) 575, 1044, 1115, 1769, 1813, 2193, 2692, 2710
BciT130I CCWGG 6 cut(s) 220, 359, 1143, 1230, 1628, 2752
BcoDI GTCTC 6 cut(s) 279, 938, 1227, 1922, 2406, 2708
BcuI ACTAGT 1 cut(s) 2876
BfmI CTRYAG 3 cut(s) 1707, 2111, 2610
BfoI RGCGCY 2 cut(s) 661, 1027
BfuAI ACCTGC 1 cut(s) 991
BglII AGATCT 3 cut(s) 733, 2311, 2368
BisI GCNGC 9 cut(s) 18, 624, 1027, 1497, 2297, 2502, 2605, 2628, 2665
BlnI CCTAGG 1 cut(s) 1700
BlsI GCNGC 9 cut(s) 19, 625, 1028, 1498, 2298, 2503, 2606, 2629, 2666
Bme1390I CCNGG 6 cut(s) 220, 359, 1143, 1230, 1628, 2752
Bme18I GGWCC 4 cut(s) 355, 420, 1145, 1697
BmgT120I GGNCC 5 cut(s) 355, 420, 1145, 1697, 2180
BmiI GGNNCC 5 cut(s) 10, 1201, 1698, 2122, 2182
BmrFI CCNGG 6 cut(s) 220, 359, 1143, 1230, 1628, 2752
BmrI ACTGGG 2 cut(s) 302, 431
BmtI GCTAGC 2 cut(s) 1644, 2525
BmuI ACTGGG 2 cut(s) 302, 431
BpiI GAAGAC 3 cut(s) 377, 2165, 2753
BplI GAGNNNNNCTC 2 cut(s) 2704, 2736
BpmI CTGGAG 3 cut(s) 303, 1251, 2678
Bpu10I CCTNAGC 2 cut(s) 258, 980
Bpu14I TTCGAA 1 cut(s) 67
BpuEI CTTGAG 5 cut(s) 116, 398, 1040, 2481, 2582
BsaBI GATNNNNATC 1 cut(s) 1395
BsaI GGTCTC 2 cut(s) 279, 2708
BsaJI CCNNGG 7 cut(s) 213, 276, 1511, 1576, 1700, 2228, 2751
BsaXI ACNNNNNCTCC 6 cut(s) 1322, 1352, 1703, 1733, 2661, 2691
Bsc4I CCNNNNNNNGG 7 cut(s) 219, 774, 985, 1930, 2188, 2535, 2698
Bse1I ACTGG 5 cut(s) 297, 437, 477, 1825, 2733
Bse3DI GCAATG 5 cut(s) 12, 1230, 1373, 2006, 2367
Bse8I GATNNNNATC 1 cut(s) 1395
BseBI CCWGG 6 cut(s) 220, 359, 1143, 1230, 1628, 2752
BseDI CCNNGG 7 cut(s) 213, 276, 1511, 1576, 1700, 2228, 2751
BseJI GATNNNNATC 1 cut(s) 1395
BseLI CCNNNNNNNGG 7 cut(s) 219, 774, 985, 1930, 2188, 2535, 2698
BseMI GCAATG 5 cut(s) 12, 1230, 1373, 2006, 2367
BseMII CTCAG 4 cut(s) 558, 1084, 1167, 3033
BseNI ACTGG 5 cut(s) 297, 437, 477, 1825, 2733
BseSI GKGCMC 2 cut(s) 1141, 2769
BseXI GCAGC 9 cut(s) 4, 610, 1013, 1508, 2283, 2488, 2616, 2639, 2676
BseYI CCCAGC 1 cut(s) 2045
BsgI GTGCAG 5 cut(s) 606, 634, 1737, 1845, 2623
Bsh1285I CGRYCG 1 cut(s) 1935
BshFI GGCC 5 cut(s) 218, 606, 1106, 2181, 2994
BshNI GGYRCC 1 cut(s) 8
BsiEI CGRYCG 1 cut(s) 1935
BsiHKAI GWGCWC 4 cut(s) 1141, 1248, 2769, 2793
BslFI GGGAC 1 cut(s) 2415
BslI CCNNNNNNNGG 7 cut(s) 219, 774, 985, 1930, 2188, 2535, 2698
BsmAI GTCTC 6 cut(s) 279, 938, 1227, 1922, 2406, 2708
BsmBI CGTCTC 1 cut(s) 1922
BsmFI GGGAC 1 cut(s) 2415
BsmI GAATGC 6 cut(s) 1186, 1480, 1499, 1953, 2076, 2395
BsnI GGCC 5 cut(s) 218, 606, 1106, 2181, 2994
Bso31I GGTCTC 2 cut(s) 279, 2708
Bsp119I TTCGAA 1 cut(s) 67
Bsp1286I GDGCHC 5 cut(s) 1141, 1248, 2769, 2793, 3050
Bsp19I CCATGG 2 cut(s) 276, 2228
BspACI CCGC 5 cut(s) 691, 829, 998, 1029, 2667
BspANI GGCC 5 cut(s) 218, 606, 1106, 2181, 2994
BspCNI CTCAG 4 cut(s) 559, 1083, 1168, 3034
BspLI GGNNCC 5 cut(s) 10, 1201, 1698, 2122, 2182
BspMI ACCTGC 1 cut(s) 991
BspOI GCTAGC 2 cut(s) 1644, 2525
BspPI GGATC 9 cut(s) 554, 1194, 1207, 1391, 1867, 2115, 2128, 2203, 2277
BspQI GCTCTTC 3 cut(s) 773, 984, 1253
BspT104I TTCGAA 1 cut(s) 67
BspT107I GGYRCC 1 cut(s) 8
BspTNI GGTCTC 2 cut(s) 279, 2708
BsrBI CCGCTC 1 cut(s) 829
BsrDI GCAATG 5 cut(s) 12, 1230, 1373, 2006, 2367
BsrI ACTGG 5 cut(s) 297, 437, 477, 1825, 2733
BssECI CCNNGG 7 cut(s) 213, 276, 1511, 1576, 1700, 2228, 2751
BssT1I CCWWGG 6 cut(s) 213, 276, 1511, 1576, 1700, 2228
Bst2UI CCWGG 6 cut(s) 220, 359, 1143, 1230, 1628, 2752
Bst4CI ACNGT 7 cut(s) 153, 1048, 1771, 1933, 2149, 2336, 2771
Bst6I CTCTTC 4 cut(s) 773, 984, 1253, 2103
BstAPI GCANNNNNTGC 1 cut(s) 2150
BstBI TTCGAA 1 cut(s) 67
BstDSI CCRYGG 2 cut(s) 276, 2228
BstEII GGTNACC 1 cut(s) 1031
BstENI CCTNNNNNAGG 1 cut(s) 983
BstH2I RGCGCY 2 cut(s) 661, 1027
BstHHI GCGC 2 cut(s) 660, 1026
BstMAI GTCTC 6 cut(s) 279, 938, 1227, 1922, 2406, 2708
BstMCI CGRYCG 1 cut(s) 1935
BstNI CCWGG 6 cut(s) 220, 359, 1143, 1230, 1628, 2752
BstNSI RCATGY 3 cut(s) 131, 1137, 1601
BstPI GGTNACC 1 cut(s) 1031
BstSCI CCNGG 6 cut(s) 218, 357, 1141, 1228, 1626, 2750
BstSFI CTRYAG 3 cut(s) 1707, 2111, 2610
BstSLI GKGCMC 2 cut(s) 1141, 2769
BstV1I GCAGC 9 cut(s) 4, 610, 1013, 1508, 2283, 2488, 2616, 2639, 2676
BstV2I GAAGAC 3 cut(s) 377, 2165, 2753
BstX2I RGATCY 7 cut(s) 733, 1199, 1396, 2120, 2195, 2311, 2368
BstXI CCANNNNNNTGG 2 cut(s) 226, 2192
BstYI RGATCY 7 cut(s) 733, 1199, 1396, 2120, 2195, 2311, 2368
BsuRI GGCC 5 cut(s) 218, 606, 1106, 2181, 2994
BtgI CCRYGG 2 cut(s) 276, 2228
BtsI GCAGTG 2 cut(s) 2606, 2825
BtsIMutI CAGTG 9 cut(s) 290, 1722, 1767, 2341, 2493, 2606, 2726, 2767, 2825
BveI ACCTGC 1 cut(s) 991
CaiI CAGNNNCTG 2 cut(s) 1052, 1283
CfoI GCGC 2 cut(s) 660, 1026
Cfr13I GGNCC 5 cut(s) 355, 420, 1145, 1697, 2180
CsiI ACCWGGT 1 cut(s) 1141
Csp6I GTAC 5 cut(s) 1405, 1412, 1432, 2327, 2566
CspCI CAANNNNNGTGG 2 cut(s) 2043, 2078
CviQI GTAC 5 cut(s) 1405, 1412, 1432, 2327, 2566
DraI TTTAAA 1 cut(s) 2682
DrdI GACNNNNNNGTC 1 cut(s) 379
DseDI GACNNNNNNGTC 1 cut(s) 379
EaeI YGGCCR 1 cut(s) 604
Eam1104I CTCTTC 4 cut(s) 773, 984, 1253, 2103
EarI CTCTTC 4 cut(s) 773, 984, 1253, 2103
Ecl136II GAGCTC 2 cut(s) 1246, 2791
Eco130I CCWWGG 6 cut(s) 213, 276, 1511, 1576, 1700, 2228
Eco24I GRGCYC 3 cut(s) 1248, 2793, 3050
Eco31I GGTCTC 2 cut(s) 279, 2708
Eco47I GGWCC 4 cut(s) 355, 420, 1145, 1697
Eco47III AGCGCT 1 cut(s) 1025
Eco53kI GAGCTC 2 cut(s) 1246, 2791
Eco57I CTGAAG 1 cut(s) 1931
Eco91I GGTNACC 1 cut(s) 1031
EcoICRI GAGCTC 2 cut(s) 1246, 2791
EcoNI CCTNNNNNAGG 1 cut(s) 983
EcoO109I RGGNCCY 2 cut(s) 1697, 2180
EcoO65I GGTNACC 1 cut(s) 1031
EcoRI GAATTC 2 cut(s) 63, 178
EcoRII CCWGG 6 cut(s) 218, 357, 1141, 1228, 1626, 2750
EcoT14I CCWWGG 6 cut(s) 213, 276, 1511, 1576, 1700, 2228
EcoT22I ATGCAT 1 cut(s) 1480
EcoT38I GRGCYC 3 cut(s) 1248, 2793, 3050
ErhI CCWWGG 6 cut(s) 213, 276, 1511, 1576, 1700, 2228
Esp3I CGTCTC 1 cut(s) 1922
FaqI GGGAC 1 cut(s) 2415
FauNDI CATATG 1 cut(s) 1156
Fnu4HI GCNGC 9 cut(s) 18, 624, 1027, 1497, 2297, 2502, 2605, 2628, 2665
FriOI GRGCYC 3 cut(s) 1248, 2793, 3050
Fsp4HI GCNGC 9 cut(s) 18, 624, 1027, 1497, 2297, 2502, 2605, 2628, 2665
GlaI GCGC 2 cut(s) 659, 1025
GluI GCNGC 9 cut(s) 18, 624, 1027, 1497, 2297, 2502, 2605, 2628, 2665
GsaI CCCAGC 1 cut(s) 2049
GsuI CTGGAG 3 cut(s) 303, 1251, 2678
HaeII RGCGCY 2 cut(s) 661, 1027
HaeIII GGCC 5 cut(s) 218, 606, 1106, 2181, 2994
HhaI GCGC 2 cut(s) 660, 1026
Hin6I GCGC 2 cut(s) 658, 1024
HinP1I GCGC 2 cut(s) 658, 1024
HincII GTYRAC 2 cut(s) 133, 384
HindII GTYRAC 2 cut(s) 133, 384
HindIII AAGCTT 5 cut(s) 299, 1293, 1358, 1904, 2843
HphI GGTGA 5 cut(s) 202, 1025, 1102, 1600, 1756
Hpy166II GTNNAC 6 cut(s) 133, 307, 384, 1139, 2767, 3077
Hpy8I GTNNAC 6 cut(s) 133, 307, 384, 1139, 2767, 3077
Hpy99I CGWCG 1 cut(s) 114
HpyAV CCTTC 3 cut(s) 907, 1361, 2231
HpyCH4III ACNGT 7 cut(s) 153, 1048, 1771, 1933, 2149, 2336, 2771
HpyCH4IV ACGT 4 cut(s) 193, 493, 936, 2464
HpySE526I ACGT 4 cut(s) 193, 493, 936, 2464
HspAI GCGC 2 cut(s) 658, 1024
LguI GCTCTTC 3 cut(s) 773, 984, 1253
LmnI GCTCC 4 cut(s) 58, 811, 2788, 3020
Lsp1109I GCAGC 9 cut(s) 4, 610, 1013, 1508, 2283, 2488, 2616, 2639, 2676
MabI ACCWGGT 1 cut(s) 1141
MaeII ACGT 4 cut(s) 193, 493, 936, 2464
MaeIII GTNAC 4 cut(s) 860, 868, 1031, 1784
MbiI CCGCTC 1 cut(s) 829
MflI RGATCY 7 cut(s) 733, 1199, 1396, 2120, 2195, 2311, 2368
MhlI GDGCHC 5 cut(s) 1141, 1248, 2769, 2793, 3050
MlsI TGGCCA 1 cut(s) 606
MluNI TGGCCA 1 cut(s) 606
MlyI GAGTC 4 cut(s) 389, 1229, 2089, 2100
MmeI TCCRAC 2 cut(s) 2173, 2247
Mox20I TGGCCA 1 cut(s) 606
Mph1103I ATGCAT 1 cut(s) 1480
MroXI GAANNNNTTC 1 cut(s) 960
MscI TGGCCA 1 cut(s) 606
MseI TTAA 8 cut(s) 246, 923, 1187, 1613, 2550, 2589, 2681, 2988
MslI CAYNNNNRTG 2 cut(s) 126, 2010
Msp20I TGGCCA 1 cut(s) 606
MspA1I CMGCKG 2 cut(s) 2296, 2667
MspR9I CCNGG 6 cut(s) 220, 359, 1143, 1230, 1628, 2752
Mva1269I GAATGC 6 cut(s) 1186, 1480, 1499, 1953, 2076, 2395
MvaI CCWGG 6 cut(s) 220, 359, 1143, 1230, 1628, 2752
NcoI CCATGG 2 cut(s) 276, 2228
NdeI CATATG 1 cut(s) 1156
NheI GCTAGC 2 cut(s) 1640, 2521
NlaIV GGNNCC 5 cut(s) 10, 1201, 1698, 2122, 2182
NmuCI GTSAC 2 cut(s) 1031, 1784
NsiI ATGCAT 1 cut(s) 1480
NspI RCATGY 3 cut(s) 131, 1137, 1601
NspV TTCGAA 1 cut(s) 67
PciI ACATGT 1 cut(s) 1133
PciSI GCTCTTC 3 cut(s) 773, 984, 1253
PctI GAATGC 6 cut(s) 1186, 1480, 1499, 1953, 2076, 2395
PdmI GAANNNNTTC 1 cut(s) 960
PfeI GAWTC 6 cut(s) 106, 341, 1563, 1727, 2540, 2895
PfoI TCCNGGA 1 cut(s) 357
PkrI GCNGC 9 cut(s) 19, 625, 1028, 1498, 2298, 2503, 2606, 2629, 2666
PleI GAGTC 4 cut(s) 388, 1229, 2089, 2100
PpsI GAGTC 4 cut(s) 388, 1229, 2089, 2100
PpuMI RGGWCCY 1 cut(s) 1697
PscI ACATGT 1 cut(s) 1133
PsiI TTATAA 1 cut(s) 2322
Psp124BI GAGCTC 2 cut(s) 1248, 2793
Psp5II RGGWCCY 1 cut(s) 1697
Psp6I CCWGG 6 cut(s) 218, 357, 1141, 1228, 1626, 2750
PspEI GGTNACC 1 cut(s) 1031
PspFI CCCAGC 1 cut(s) 2045
PspGI CCWGG 6 cut(s) 218, 357, 1141, 1228, 1626, 2750
PspN4I GGNNCC 5 cut(s) 10, 1201, 1698, 2122, 2182
PspPI GGNCC 5 cut(s) 355, 420, 1145, 1697, 2180
PspPPI RGGWCCY 1 cut(s) 1697
PstNI CAGNNNCTG 2 cut(s) 1052, 1283
PsuI RGATCY 7 cut(s) 733, 1199, 1396, 2120, 2195, 2311, 2368
PvuII CAGCTG 1 cut(s) 2296
RsaI GTAC 5 cut(s) 1406, 1413, 1433, 2328, 2567
RsaNI GTAC 5 cut(s) 1405, 1412, 1432, 2327, 2566
RseI CAYNNNNRTG 2 cut(s) 126, 2010
SacI GAGCTC 2 cut(s) 1248, 2793
SapI GCTCTTC 3 cut(s) 773, 984, 1253
SaqAI TTAA 8 cut(s) 246, 923, 1187, 1613, 2550, 2589, 2681, 2988
SatI GCNGC 9 cut(s) 18, 624, 1027, 1497, 2297, 2502, 2605, 2628, 2665
Sau96I GGNCC 5 cut(s) 355, 420, 1145, 1697, 2180
SchI GAGTC 4 cut(s) 389, 1229, 2089, 2100
ScrFI CCNGG 6 cut(s) 220, 359, 1143, 1230, 1628, 2752
SduI GDGCHC 5 cut(s) 1141, 1248, 2769, 2793, 3050
SexAI ACCWGGT 1 cut(s) 1141
SfcI CTRYAG 3 cut(s) 1707, 2111, 2610
SfuI TTCGAA 1 cut(s) 67
SinI GGWCC 4 cut(s) 355, 420, 1145, 1697
SmiMI CAYNNNNRTG 2 cut(s) 126, 2010
SmlI CTYRAG 5 cut(s) 95, 377, 1019, 2496, 2561
SmoI CTYRAG 5 cut(s) 95, 377, 1019, 2496, 2561
SpeI ACTAGT 1 cut(s) 2876
SsiI CCGC 5 cut(s) 691, 829, 998, 1029, 2667
SstI GAGCTC 2 cut(s) 1248, 2793
StyD4I CCNGG 6 cut(s) 218, 357, 1141, 1228, 1626, 2750
StyI CCWWGG 6 cut(s) 213, 276, 1511, 1576, 1700, 2228
TaaI ACNGT 7 cut(s) 153, 1048, 1771, 1933, 2149, 2336, 2771
TaiI ACGT 4 cut(s) 196, 496, 939, 2467
TaqI TCGA 5 cut(s) 67, 109, 406, 1935, 2811
TaqII GACCGA 1 cut(s) 437
TatI WGTACW 2 cut(s) 1404, 1411
TfiI GAWTC 6 cut(s) 106, 341, 1563, 1727, 2540, 2895
Tru1I TTAA 8 cut(s) 246, 923, 1187, 1613, 2550, 2589, 2681, 2988
Tru9I TTAA 8 cut(s) 246, 923, 1187, 1613, 2550, 2589, 2681, 2988
TscAI CASTG 9 cut(s) 297, 1729, 1774, 2341, 2493, 2606, 2733, 2774, 2832
TseFI GTSAC 2 cut(s) 1031, 1784
TseI GCWGC 9 cut(s) 17, 623, 1026, 1496, 2296, 2501, 2604, 2627, 2664
Tsp45I GTSAC 2 cut(s) 1031, 1784
TspRI CASTG 9 cut(s) 297, 1729, 1774, 2341, 2493, 2606, 2733, 2774, 2832
VneI GTGCAC 2 cut(s) 1137, 2765
VpaK11BI GGWCC 4 cut(s) 355, 420, 1145, 1697
XagI CCTNNNNNAGG 1 cut(s) 983
XapI RAATTY 9 cut(s) 63, 80, 178, 466, 572, 680, 1913, 2999, 3012
XbaI TCTAGA 5 cut(s) 35, 73, 736, 1216, 1238
XceI RCATGY 3 cut(s) 131, 1137, 1601
XcmI CCANNNNNNNNNTGG 1 cut(s) 2654
XmaJI CCTAGG 1 cut(s) 1700
XmnI GAANNNNTTC 1 cut(s) 960
Zsp2I ATGCAT 1 cut(s) 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.