Thioredoxin-like 4
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07700 AT1G07700 AT1G07700 AT1G07700 |
| fragaria_vesca | FvH4_2g34430 FvH4_2g34430 FvH4_2g34430 |
| malus_domestica | MD08G1101500.v1.1 MD15G1082700.v1.1 |
| prunus_persica | Prupe.1G435400_v2.0.a1 Prupe.1G435400_v2.0.a1 Prupe.1G435400_v2.0.a1 |
| pyrus_communis | pycom08g08200 pycom15g07750 |
| rosa_chinensis | RchiOBHm_Chr2g0138871 RchiOBHm_Chr6g0307941 |
| rosa_laevigata | RLG00000010685 |
| rosa_multiflora | Rmu_co8456761.1_g000001 Rmu_sc0003252.1_g000021 |
| rosa_roxburghii | Rroxscaffold_7G00160750 |
| rosa_rugosa | Rorug06G0362000 Rorug06G0362000 |
| rosa_samantha | Rh2AG402600 Rh2CG388700 Rh2DG422900 Rh6AG470900 Rh6BG481900 Rh6CG487300 Rh6DG473400 |
| rosa_wichuraiana | Rw2G032760 Rw6G002000 Rw6G041120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 68 |
| AclWI | GGATC | 1 cut(s) | 61 |
| AcoI | YGGCCR | 1 cut(s) | 308 |
| AcsI | RAATTY | 3 cut(s) | 84, 269, 296 |
| AfaI | GTAC | 1 cut(s) | 377 |
| AflIII | ACRYGT | 1 cut(s) | 112 |
| AgsI | TTSAA | 5 cut(s) | 46, 159, 257, 294, 396 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 130, 162 |
| AluBI | AGCT | 2 cut(s) | 168, 369 |
| AluI | AGCT | 2 cut(s) | 168, 369 |
| AlwI | GGATC | 1 cut(s) | 61 |
| AoxI | GGCC | 3 cut(s) | 30, 36, 308 |
| ApeKI | GCWGC | 1 cut(s) | 369 |
| ApoI | RAATTY | 3 cut(s) | 84, 269, 296 |
| BbvI | GCAGC | 1 cut(s) | 356 |
| BceAI | ACGGC | 1 cut(s) | 323 |
| BfaI | CTAG | 1 cut(s) | 129 |
| BisI | GCNGC | 1 cut(s) | 370 |
| BlsI | GCNGC | 1 cut(s) | 371 |
| BmsI | GCATC | 1 cut(s) | 141 |
| BoxI | GACNNNNGTC | 1 cut(s) | 246 |
| BsaBI | GATNNNNATC | 2 cut(s) | 210, 348 |
| BsaJI | CCNNGG | 1 cut(s) | 33 |
| Bse1I | ACTGG | 1 cut(s) | 251 |
| Bse8I | GATNNNNATC | 2 cut(s) | 210, 348 |
| BseDI | CCNNGG | 1 cut(s) | 33 |
| BseJI | GATNNNNATC | 2 cut(s) | 210, 348 |
| BseNI | ACTGG | 1 cut(s) | 251 |
| BseXI | GCAGC | 1 cut(s) | 356 |
| BshFI | GGCC | 3 cut(s) | 32, 38, 310 |
| BsnI | GGCC | 3 cut(s) | 32, 38, 310 |
| Bsp143I | GATC | 2 cut(s) | 53, 192 |
| BspANI | GGCC | 3 cut(s) | 32, 38, 310 |
| BspPI | GGATC | 1 cut(s) | 61 |
| BsrI | ACTGG | 1 cut(s) | 251 |
| BssECI | CCNNGG | 1 cut(s) | 33 |
| BssMI | GATC | 2 cut(s) | 53, 192 |
| Bst6I | CTCTTC | 1 cut(s) | 278 |
| BstDEI | CTNAG | 1 cut(s) | 102 |
| BstKTI | GATC | 2 cut(s) | 56, 195 |
| BstMBI | GATC | 2 cut(s) | 53, 192 |
| BstNSI | RCATGY | 1 cut(s) | 116 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 246 |
| BstV1I | GCAGC | 1 cut(s) | 356 |
| BsuRI | GGCC | 3 cut(s) | 32, 38, 310 |
| Csp6I | GTAC | 1 cut(s) | 376 |
| CviAII | CATG | 1 cut(s) | 113 |
| CviJI | RGCY | 6 cut(s) | 32, 38, 168, 203, 310, 369 |
| CviKI_1 | RGCY | 6 cut(s) | 32, 38, 168, 203, 310, 369 |
| CviQI | GTAC | 1 cut(s) | 376 |
| DdeI | CTNAG | 1 cut(s) | 102 |
| DpnI | GATC | 2 cut(s) | 55, 194 |
| DpnII | GATC | 2 cut(s) | 53, 192 |
| EaeI | YGGCCR | 1 cut(s) | 308 |
| Eam1104I | CTCTTC | 1 cut(s) | 278 |
| EarI | CTCTTC | 1 cut(s) | 278 |
| Eco147I | AGGCCT | 1 cut(s) | 38 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 1 cut(s) | 116 |
| FatI | CATG | 1 cut(s) | 112 |
| FauNDI | CATATG | 1 cut(s) | 79 |
| Fnu4HI | GCNGC | 1 cut(s) | 370 |
| Fsp4HI | GCNGC | 1 cut(s) | 370 |
| FspBI | CTAG | 1 cut(s) | 129 |
| GluI | GCNGC | 1 cut(s) | 370 |
| HaeIII | GGCC | 3 cut(s) | 32, 38, 310 |
| Hin1II | CATG | 1 cut(s) | 116 |
| Hpy188I | TCNGA | 4 cut(s) | 137, 229, 279, 354 |
| Hpy188III | TCNNGA | 1 cut(s) | 301 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 372 |
| HpyF3I | CTNAG | 1 cut(s) | 102 |
| Hsp92II | CATG | 1 cut(s) | 116 |
| Kzo9I | GATC | 2 cut(s) | 53, 192 |
| LpnPI | CCDG | 3 cut(s) | 129, 257, 264 |
| Lsp1109I | GCAGC | 1 cut(s) | 356 |
| LweI | GCATC | 1 cut(s) | 141 |
| MaeI | CTAG | 1 cut(s) | 129 |
| MalI | GATC | 2 cut(s) | 55, 194 |
| MboI | GATC | 2 cut(s) | 53, 192 |
| MboII | GAAGA | 4 cut(s) | 202, 245, 282, 295 |
| MluCI | AATT | 7 cut(s) | 46, 84, 138, 221, 269, 296, 325 |
| MmeI | TCCRAC | 1 cut(s) | 97 |
| MnlI | CCTC | 2 cut(s) | 28, 49 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| NdeI | CATATG | 1 cut(s) | 79 |
| NdeII | GATC | 2 cut(s) | 53, 192 |
| NlaIII | CATG | 1 cut(s) | 116 |
| NmeAIII | GCCGAG | 1 cut(s) | 58 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 116 |
| PceI | AGGCCT | 1 cut(s) | 38 |
| PciI | ACATGT | 1 cut(s) | 112 |
| PkrI | GCNGC | 1 cut(s) | 371 |
| PscI | ACATGT | 1 cut(s) | 112 |
| PshAI | GACNNNNGTC | 1 cut(s) | 246 |
| PsiI | TTATAA | 1 cut(s) | 68 |
| RsaI | GTAC | 1 cut(s) | 377 |
| RsaNI | GTAC | 1 cut(s) | 376 |
| SatI | GCNGC | 1 cut(s) | 370 |
| Sau3AI | GATC | 2 cut(s) | 53, 192 |
| SetI | ASST | 5 cut(s) | 148, 170, 246, 359, 371 |
| SfaNI | GCATC | 1 cut(s) | 141 |
| Sse9I | AATT | 7 cut(s) | 46, 84, 138, 221, 269, 296, 325 |
| SseBI | AGGCCT | 1 cut(s) | 38 |
| SspMI | CTAG | 1 cut(s) | 129 |
| StuI | AGGCCT | 1 cut(s) | 38 |
| TasI | AATT | 7 cut(s) | 46, 84, 138, 221, 269, 296, 325 |
| TatI | WGTACW | 1 cut(s) | 375 |
| TseI | GCWGC | 1 cut(s) | 369 |
| TspDTI | ATGAA | 4 cut(s) | 96, 222, 246, 296 |
| XapI | RAATTY | 3 cut(s) | 84, 269, 296 |
| XceI | RCATGY | 1 cut(s) | 116 |
| XspI | CTAG | 1 cut(s) | 129 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |