Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G55820 |
| malus_domestica | MD07G1214900.v1.1 |
| prunus_persica | Prupe.2G246900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0369501 RchiOBHm_Chr3g0468601 |
| rosa_laevigata | RLG00000001004 RLG00000009285 RLG00000034361 |
| rosa_multiflora | Rmu_co8213256.1_g000001 Rmu_sc0001141.1_g000022 Rmu_sc0017355.1_g000002 Rmu_sc0031857.1_g000001 Rmu_ssc0000484.1_g000025 |
| rosa_roxburghii | Rroxscaffold_4G00287580 |
| rosa_rugosa | Rorug01G0351000 |
| rosa_samantha | Rh1AG359000 Rh1BG322700 Rh1DG353500 Rh2AG179500 Rh2DG185300 Rh3BG166800 Rh4BG074800 Rh4BG080200 Rh5BG484400 Rh5CG509000 Rh7BG195500 |
| rosa_wichuraiana | Rw1G031630 Rw5G043290 Rw6G011390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 35, 80 |
| AciI | CCGC | 4 cut(s) | 244, 340, 343, 433 |
| AclWI | GGATC | 1 cut(s) | 98 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 256, 342, 496 |
| AgsI | TTSAA | 1 cut(s) | 241 |
| AjnI | CCWGG | 1 cut(s) | 12 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 337, 369, 470, 502 |
| AluBI | AGCT | 3 cut(s) | 66, 206, 236 |
| AluI | AGCT | 3 cut(s) | 66, 206, 236 |
| Alw26I | GTCTC | 1 cut(s) | 247 |
| AlwI | GGATC | 1 cut(s) | 98 |
| ApeKI | GCWGC | 1 cut(s) | 63 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 236, 380 |
| AspLEI | GCGC | 1 cut(s) | 82 |
| AspS9I | GGNCC | 2 cut(s) | 247, 259 |
| AsuHPI | GGTGA | 1 cut(s) | 524 |
| AvaII | GGWCC | 2 cut(s) | 247, 259 |
| BbsI | GAAGAC | 1 cut(s) | 89 |
| BbvI | GCAGC | 1 cut(s) | 75 |
| BccI | CCATC | 4 cut(s) | 232, 458, 469, 503 |
| BceAI | ACGGC | 1 cut(s) | 320 |
| BciT130I | CCWGG | 1 cut(s) | 14 |
| BclI | TGATCA | 1 cut(s) | 180 |
| BcoDI | GTCTC | 1 cut(s) | 247 |
| BfaI | CTAG | 2 cut(s) | 203, 315 |
| BglII | AGATCT | 1 cut(s) | 199 |
| BisI | GCNGC | 2 cut(s) | 64, 341 |
| BlsI | GCNGC | 2 cut(s) | 65, 342 |
| Bme1390I | CCNGG | 1 cut(s) | 14 |
| Bme18I | GGWCC | 2 cut(s) | 247, 259 |
| BmgT120I | GGNCC | 2 cut(s) | 247, 259 |
| BmiI | GGNNCC | 3 cut(s) | 248, 261, 355 |
| BmrFI | CCNGG | 1 cut(s) | 14 |
| BmsI | GCATC | 1 cut(s) | 469 |
| BpiI | GAAGAC | 1 cut(s) | 89 |
| BsaBI | GATNNNNATC | 1 cut(s) | 179 |
| BsaJI | CCNNGG | 1 cut(s) | 385 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 337, 367 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 256, 342, 496 |
| Bse1I | ACTGG | 1 cut(s) | 261 |
| Bse3DI | GCAATG | 1 cut(s) | 312 |
| Bse8I | GATNNNNATC | 1 cut(s) | 179 |
| BseBI | CCWGG | 1 cut(s) | 14 |
| BseDI | CCNNGG | 1 cut(s) | 385 |
| BseGI | GGATG | 2 cut(s) | 469, 484 |
| BseJI | GATNNNNATC | 1 cut(s) | 179 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 256, 342, 496 |
| BseMI | GCAATG | 1 cut(s) | 312 |
| BseMII | CTCAG | 2 cut(s) | 242, 345 |
| BseNI | ACTGG | 1 cut(s) | 261 |
| BseXI | GCAGC | 1 cut(s) | 75 |
| Bsh1236I | CGCG | 2 cut(s) | 35, 80 |
| Bsh1285I | CGRYCG | 1 cut(s) | 416 |
| BsiEI | CGRYCG | 1 cut(s) | 416 |
| BsiSI | CCGG | 1 cut(s) | 194 |
| BslFI | GGGAC | 1 cut(s) | 260 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 256, 342, 496 |
| BsmAI | GTCTC | 1 cut(s) | 247 |
| BsmFI | GGGAC | 1 cut(s) | 260 |
| Bsp143I | GATC | 6 cut(s) | 103, 156, 180, 199, 413, 427 |
| Bsp19I | CCATGG | 1 cut(s) | 385 |
| BspACI | CCGC | 4 cut(s) | 244, 340, 343, 433 |
| BspCNI | CTCAG | 2 cut(s) | 243, 344 |
| BspFNI | CGCG | 2 cut(s) | 35, 80 |
| BspLI | GGNNCC | 3 cut(s) | 248, 261, 355 |
| BspPI | GGATC | 1 cut(s) | 98 |
| BsrDI | GCAATG | 1 cut(s) | 312 |
| BsrI | ACTGG | 1 cut(s) | 261 |
| BssECI | CCNNGG | 1 cut(s) | 385 |
| BssMI | GATC | 6 cut(s) | 103, 156, 180, 199, 413, 427 |
| BssT1I | CCWWGG | 1 cut(s) | 385 |
| Bst2UI | CCWGG | 1 cut(s) | 14 |
| Bst4CI | ACNGT | 3 cut(s) | 140, 214, 364 |
| BstDEI | CTNAG | 2 cut(s) | 251, 331 |
| BstDSI | CCRYGG | 1 cut(s) | 385 |
| BstF5I | GGATG | 2 cut(s) | 469, 484 |
| BstFNI | CGCG | 2 cut(s) | 35, 80 |
| BstHHI | GCGC | 1 cut(s) | 82 |
| BstKTI | GATC | 6 cut(s) | 106, 159, 183, 202, 416, 430 |
| BstMAI | GTCTC | 1 cut(s) | 247 |
| BstMBI | GATC | 6 cut(s) | 103, 156, 180, 199, 413, 427 |
| BstMCI | CGRYCG | 1 cut(s) | 416 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 88 |
| BstNI | CCWGG | 1 cut(s) | 14 |
| BstNSI | RCATGY | 1 cut(s) | 458 |
| BstSCI | CCNGG | 1 cut(s) | 12 |
| BstUI | CGCG | 2 cut(s) | 35, 80 |
| BstV1I | GCAGC | 1 cut(s) | 75 |
| BstV2I | GAAGAC | 1 cut(s) | 89 |
| BstX2I | RGATCY | 2 cut(s) | 103, 199 |
| BstYI | RGATCY | 2 cut(s) | 103, 199 |
| BtgI | CCRYGG | 1 cut(s) | 385 |
| BtsCI | GGATG | 2 cut(s) | 469, 484 |
| BtsIMutI | CAGTG | 1 cut(s) | 145 |
| CfoI | GCGC | 1 cut(s) | 82 |
| Cfr13I | GGNCC | 2 cut(s) | 247, 259 |
| CviAII | CATG | 2 cut(s) | 386, 455 |
| CviJI | RGCY | 8 cut(s) | 12, 66, 119, 206, 236, 327, 335, 394 |
| CviKI_1 | RGCY | 8 cut(s) | 12, 66, 119, 206, 236, 327, 335, 394 |
| DdeI | CTNAG | 2 cut(s) | 251, 331 |
| DpnI | GATC | 6 cut(s) | 105, 158, 182, 201, 415, 429 |
| DpnII | GATC | 6 cut(s) | 103, 156, 180, 199, 413, 427 |
| EciI | GGCGGA | 1 cut(s) | 358 |
| Eco130I | CCWWGG | 1 cut(s) | 385 |
| Eco47I | GGWCC | 2 cut(s) | 247, 259 |
| EcoO109I | RGGNCCY | 1 cut(s) | 247 |
| EcoRII | CCWGG | 1 cut(s) | 12 |
| EcoT14I | CCWWGG | 1 cut(s) | 385 |
| ErhI | CCWWGG | 1 cut(s) | 385 |
| FaeI | CATG | 2 cut(s) | 389, 458 |
| FaiI | YATR | 6 cut(s) | 301, 303, 387, 456, 461, 507 |
| FaqI | GGGAC | 1 cut(s) | 260 |
| FatI | CATG | 2 cut(s) | 385, 454 |
| FauI | CCCGC | 1 cut(s) | 237 |
| FauNDI | CATATG | 1 cut(s) | 301 |
| FbaI | TGATCA | 1 cut(s) | 180 |
| Fnu4HI | GCNGC | 2 cut(s) | 64, 341 |
| FokI | GGATG | 2 cut(s) | 476, 491 |
| Fsp4HI | GCNGC | 2 cut(s) | 64, 341 |
| FspBI | CTAG | 2 cut(s) | 203, 315 |
| GlaI | GCGC | 1 cut(s) | 81 |
| GluI | GCNGC | 2 cut(s) | 64, 341 |
| HapII | CCGG | 1 cut(s) | 194 |
| HhaI | GCGC | 1 cut(s) | 82 |
| Hin1II | CATG | 2 cut(s) | 389, 458 |
| Hin6I | GCGC | 1 cut(s) | 80 |
| HinP1I | GCGC | 1 cut(s) | 80 |
| HindIII | AAGCTT | 1 cut(s) | 234 |
| HinfI | GANTC | 2 cut(s) | 25, 445 |
| HpaII | CCGG | 1 cut(s) | 194 |
| HphI | GGTGA | 1 cut(s) | 524 |
| Hpy188I | TCNGA | 5 cut(s) | 161, 229, 358, 418, 474 |
| Hpy188III | TCNNGA | 2 cut(s) | 101, 315 |
| HpyAV | CCTTC | 3 cut(s) | 370, 384, 433 |
| HpyCH4III | ACNGT | 3 cut(s) | 140, 214, 364 |
| HpyCH4IV | ACGT | 1 cut(s) | 94 |
| HpyCH4V | TGCA | 3 cut(s) | 63, 305, 454 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 88 |
| HpyF3I | CTNAG | 2 cut(s) | 251, 331 |
| HpySE526I | ACGT | 1 cut(s) | 94 |
| Hsp92II | CATG | 2 cut(s) | 389, 458 |
| HspAI | GCGC | 1 cut(s) | 80 |
| Ksp22I | TGATCA | 1 cut(s) | 180 |
| Kzo9I | GATC | 6 cut(s) | 103, 156, 180, 199, 413, 427 |
| LpnPI | CCDG | 7 cut(s) | 26, 114, 207, 242, 263, 380, 503 |
| Lsp1109I | GCAGC | 1 cut(s) | 75 |
| LweI | GCATC | 1 cut(s) | 469 |
| MaeI | CTAG | 2 cut(s) | 203, 315 |
| MaeII | ACGT | 1 cut(s) | 94 |
| MaeIII | GTNAC | 1 cut(s) | 150 |
| MalI | GATC | 6 cut(s) | 105, 158, 182, 201, 415, 429 |
| MboI | GATC | 6 cut(s) | 103, 156, 180, 199, 413, 427 |
| MboII | GAAGA | 3 cut(s) | 89, 209, 298 |
| MflI | RGATCY | 2 cut(s) | 103, 199 |
| MlyI | GAGTC | 1 cut(s) | 454 |
| MmeI | TCCRAC | 1 cut(s) | 131 |
| MnlI | CCTC | 2 cut(s) | 15, 429 |
| MroXI | GAANNNNTTC | 2 cut(s) | 236, 380 |
| MspI | CCGG | 1 cut(s) | 194 |
| MspR9I | CCNGG | 1 cut(s) | 14 |
| MvaI | CCWGG | 1 cut(s) | 14 |
| MvnI | CGCG | 2 cut(s) | 35, 80 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 88 |
| NcoI | CCATGG | 1 cut(s) | 385 |
| NdeI | CATATG | 1 cut(s) | 301 |
| NdeII | GATC | 6 cut(s) | 103, 156, 180, 199, 413, 427 |
| NlaIII | CATG | 2 cut(s) | 389, 458 |
| NlaIV | GGNNCC | 3 cut(s) | 248, 261, 355 |
| NmeAIII | GCCGAG | 1 cut(s) | 508 |
| NspI | RCATGY | 1 cut(s) | 458 |
| PdmI | GAANNNNTTC | 2 cut(s) | 236, 380 |
| PfeI | GAWTC | 1 cut(s) | 25 |
| PkrI | GCNGC | 2 cut(s) | 65, 342 |
| Ple19I | CGATCG | 1 cut(s) | 416 |
| PleI | GAGTC | 1 cut(s) | 453 |
| PpsI | GAGTC | 1 cut(s) | 453 |
| PpuMI | RGGWCCY | 1 cut(s) | 247 |
| Psp5II | RGGWCCY | 1 cut(s) | 247 |
| Psp6I | CCWGG | 1 cut(s) | 12 |
| PspGI | CCWGG | 1 cut(s) | 12 |
| PspN4I | GGNNCC | 3 cut(s) | 248, 261, 355 |
| PspPI | GGNCC | 2 cut(s) | 247, 259 |
| PspPPI | RGGWCCY | 1 cut(s) | 247 |
| PsuI | RGATCY | 2 cut(s) | 103, 199 |
| PvuI | CGATCG | 1 cut(s) | 416 |
| SatI | GCNGC | 2 cut(s) | 64, 341 |
| Sau3AI | GATC | 6 cut(s) | 103, 156, 180, 199, 413, 427 |
| Sau96I | GGNCC | 2 cut(s) | 247, 259 |
| SchI | GAGTC | 1 cut(s) | 454 |
| ScrFI | CCNGG | 1 cut(s) | 14 |
| SetI | ASST | 5 cut(s) | 68, 97, 208, 238, 252 |
| SfaNI | GCATC | 1 cut(s) | 469 |
| SinI | GGWCC | 2 cut(s) | 247, 259 |
| SsiI | CCGC | 4 cut(s) | 244, 340, 343, 433 |
| SspMI | CTAG | 2 cut(s) | 203, 315 |
| StyD4I | CCNGG | 1 cut(s) | 12 |
| StyI | CCWWGG | 1 cut(s) | 385 |
| TaaI | ACNGT | 3 cut(s) | 140, 214, 364 |
| TaiI | ACGT | 1 cut(s) | 97 |
| TaqI | TCGA | 1 cut(s) | 412 |
| TauI | GCSGC | 1 cut(s) | 343 |
| TfiI | GAWTC | 1 cut(s) | 25 |
| TscAI | CASTG | 1 cut(s) | 145 |
| TseI | GCWGC | 1 cut(s) | 63 |
| TspDTI | ATGAA | 1 cut(s) | 305 |
| TspRI | CASTG | 1 cut(s) | 145 |
| VpaK11BI | GGWCC | 2 cut(s) | 247, 259 |
| XbaI | TCTAGA | 1 cut(s) | 314 |
| XceI | RCATGY | 1 cut(s) | 458 |
| XmnI | GAANNNNTTC | 2 cut(s) | 236, 380 |
| XspI | CTAG | 2 cut(s) | 203, 315 |