No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G56660 AT1G56660 |
| fragaria_vesca | FvH4_1g28340 FvH4_1g28340 FvH4_1g28340 |
| malus_domestica | MD14G1004000.v1.1 |
| prunus_persica | Prupe.7G006500_v2.0.a1 |
| pyrus_communis | pycom12g00470 |
| rosa_chinensis | RchiOBHm_Chr3g0496751 |
| rosa_laevigata | RLG00000022508 |
| rosa_multiflora | Rmu_co8366833.1_g000001 Rmu_sc0000542.1_g000011 Rmu_sc0001832.1_g000015 |
| rosa_roxburghii | Rroxscaffold_6G00388720 |
| rosa_rugosa | Rorug03G0286300 Rorug03G0286400 |
| rosa_samantha | Rh3AG331000 Rh3BG367000 Rh3BG367200 Rh3BG367400 Rh3BG367600 Rh3CG363700 Rh3DG367000 |
| rosa_wichuraiana | Rw3G028990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 90 |
| AclWI | GGATC | 2 cut(s) | 348, 624 |
| AcuI | CTGAAG | 1 cut(s) | 176 |
| AgsI | TTSAA | 3 cut(s) | 17, 128, 235 |
| AluBI | AGCT | 2 cut(s) | 478, 508 |
| AluI | AGCT | 2 cut(s) | 478, 508 |
| AlwI | GGATC | 2 cut(s) | 348, 624 |
| AsuHPI | GGTGA | 1 cut(s) | 104 |
| BanII | GRGCYC | 1 cut(s) | 320 |
| BbsI | GAAGAC | 2 cut(s) | 12, 245 |
| BccI | CCATC | 2 cut(s) | 323, 777 |
| BclI | TGATCA | 1 cut(s) | 63 |
| BfaI | CTAG | 1 cut(s) | 86 |
| BmsI | GCATC | 1 cut(s) | 67 |
| BpiI | GAAGAC | 2 cut(s) | 12, 245 |
| BpuEI | CTTGAG | 1 cut(s) | 494 |
| BsaJI | CCNNGG | 2 cut(s) | 72, 99 |
| BseDI | CCNNGG | 2 cut(s) | 72, 99 |
| BseGI | GGATG | 3 cut(s) | 82, 457, 637 |
| BseMII | CTCAG | 1 cut(s) | 333 |
| BseRI | GAGGAG | 5 cut(s) | 188, 191, 194, 626, 808 |
| BsmI | GAATGC | 1 cut(s) | 428 |
| Bsp1286I | GDGCHC | 1 cut(s) | 320 |
| Bsp143I | GATC | 3 cut(s) | 63, 340, 616 |
| BspACI | CCGC | 1 cut(s) | 90 |
| BspCNI | CTCAG | 1 cut(s) | 332 |
| BspPI | GGATC | 2 cut(s) | 348, 624 |
| BspQI | GCTCTTC | 1 cut(s) | 468 |
| BssECI | CCNNGG | 2 cut(s) | 72, 99 |
| BssMI | GATC | 3 cut(s) | 63, 340, 616 |
| BssT1I | CCWWGG | 2 cut(s) | 72, 99 |
| Bst6I | CTCTTC | 8 cut(s) | 222, 408, 468, 486, 537, 576, 603, 770 |
| BstDEI | CTNAG | 2 cut(s) | 319, 459 |
| BstF5I | GGATG | 3 cut(s) | 82, 457, 637 |
| BstKTI | GATC | 3 cut(s) | 66, 343, 619 |
| BstMBI | GATC | 3 cut(s) | 63, 340, 616 |
| BstV2I | GAAGAC | 2 cut(s) | 12, 245 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 145 |
| BtgZI | GCGATG | 1 cut(s) | 543 |
| BtsCI | GGATG | 3 cut(s) | 82, 457, 637 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 292, 327 |
| CviJI | RGCY | 4 cut(s) | 160, 318, 478, 508 |
| CviKI_1 | RGCY | 4 cut(s) | 160, 318, 478, 508 |
| DdeI | CTNAG | 2 cut(s) | 319, 459 |
| DpnI | GATC | 3 cut(s) | 65, 342, 618 |
| DpnII | GATC | 3 cut(s) | 63, 340, 616 |
| Eam1104I | CTCTTC | 8 cut(s) | 222, 408, 468, 486, 537, 576, 603, 770 |
| EarI | CTCTTC | 8 cut(s) | 222, 408, 468, 486, 537, 576, 603, 770 |
| Eco130I | CCWWGG | 2 cut(s) | 72, 99 |
| Eco24I | GRGCYC | 1 cut(s) | 320 |
| Eco57I | CTGAAG | 1 cut(s) | 176 |
| EcoT14I | CCWWGG | 2 cut(s) | 72, 99 |
| EcoT38I | GRGCYC | 1 cut(s) | 320 |
| ErhI | CCWWGG | 2 cut(s) | 72, 99 |
| FaiI | YATR | 3 cut(s) | 168, 687, 764 |
| FbaI | TGATCA | 1 cut(s) | 63 |
| FokI | GGATG | 3 cut(s) | 89, 464, 644 |
| FriOI | GRGCYC | 1 cut(s) | 320 |
| FspBI | CTAG | 1 cut(s) | 86 |
| HincII | GTYRAC | 1 cut(s) | 40 |
| HindII | GTYRAC | 1 cut(s) | 40 |
| HinfI | GANTC | 2 cut(s) | 95, 455 |
| HpaI | GTTAAC | 1 cut(s) | 40 |
| HphI | GGTGA | 1 cut(s) | 104 |
| Hpy166II | GTNNAC | 1 cut(s) | 40 |
| Hpy188I | TCNGA | 1 cut(s) | 322 |
| Hpy188III | TCNNGA | 2 cut(s) | 67, 620 |
| Hpy8I | GTNNAC | 1 cut(s) | 40 |
| HpyAV | CCTTC | 7 cut(s) | 112, 256, 547, 586, 647, 664, 795 |
| HpyCH4V | TGCA | 2 cut(s) | 80, 426 |
| HpyF3I | CTNAG | 2 cut(s) | 319, 459 |
| Ksp22I | TGATCA | 1 cut(s) | 63 |
| KspAI | GTTAAC | 1 cut(s) | 40 |
| Kzo9I | GATC | 3 cut(s) | 63, 340, 616 |
| LguI | GCTCTTC | 1 cut(s) | 468 |
| LpnPI | CCDG | 4 cut(s) | 174, 464, 548, 587 |
| LweI | GCATC | 1 cut(s) | 67 |
| MaeI | CTAG | 1 cut(s) | 86 |
| MaeIII | GTNAC | 1 cut(s) | 92 |
| MalI | GATC | 3 cut(s) | 65, 342, 618 |
| MboI | GATC | 3 cut(s) | 63, 340, 616 |
| MhlI | GDGCHC | 1 cut(s) | 320 |
| MlyI | GAGTC | 1 cut(s) | 89 |
| MseI | TTAA | 3 cut(s) | 39, 447, 558 |
| MslI | CAYNNNNRTG | 1 cut(s) | 815 |
| Mva1269I | GAATGC | 1 cut(s) | 428 |
| NdeII | GATC | 3 cut(s) | 63, 340, 616 |
| NmuCI | GTSAC | 1 cut(s) | 92 |
| PciSI | GCTCTTC | 1 cut(s) | 468 |
| PctI | GAATGC | 1 cut(s) | 428 |
| PfeI | GAWTC | 1 cut(s) | 455 |
| PflFI | GACNNNGTC | 1 cut(s) | 139 |
| PleI | GAGTC | 1 cut(s) | 89 |
| PpsI | GAGTC | 1 cut(s) | 89 |
| PsyI | GACNNNGTC | 1 cut(s) | 139 |
| RseI | CAYNNNNRTG | 1 cut(s) | 815 |
| SapI | GCTCTTC | 1 cut(s) | 468 |
| SaqAI | TTAA | 3 cut(s) | 39, 447, 558 |
| Sau3AI | GATC | 3 cut(s) | 63, 340, 616 |
| SchI | GAGTC | 1 cut(s) | 89 |
| SduI | GDGCHC | 1 cut(s) | 320 |
| SetI | ASST | 6 cut(s) | 39, 391, 480, 510, 516, 558 |
| SfaNI | GCATC | 1 cut(s) | 67 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 815 |
| SmlI | CTYRAG | 1 cut(s) | 509 |
| SmoI | CTYRAG | 1 cut(s) | 509 |
| SsiI | CCGC | 1 cut(s) | 90 |
| SspMI | CTAG | 1 cut(s) | 86 |
| StyI | CCWWGG | 2 cut(s) | 72, 99 |
| TaqI | TCGA | 1 cut(s) | 440 |
| TfiI | GAWTC | 1 cut(s) | 455 |
| Tru1I | TTAA | 3 cut(s) | 39, 447, 558 |
| Tru9I | TTAA | 3 cut(s) | 39, 447, 558 |
| TseFI | GTSAC | 1 cut(s) | 92 |
| Tsp45I | GTSAC | 1 cut(s) | 92 |
| TspDTI | ATGAA | 8 cut(s) | 240, 417, 447, 504, 534, 657, 711, 782 |
| Tth111I | GACNNNGTC | 1 cut(s) | 139 |
| XspI | CTAG | 1 cut(s) | 86 |