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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G56660 AT1G56660 |
| fragaria_vesca | FvH4_1g28340 FvH4_1g28340 FvH4_1g28340 |
| malus_domestica | MD14G1004000.v1.1 |
| prunus_persica | Prupe.7G006500_v2.0.a1 |
| pyrus_communis | pycom12g00470 |
| rosa_chinensis | RchiOBHm_Chr3g0496751 |
| rosa_laevigata | RLG00000022508 |
| rosa_multiflora | Rmu_co8366833.1_g000001 Rmu_sc0000542.1_g000011 Rmu_sc0001832.1_g000015 |
| rosa_roxburghii | Rroxscaffold_6G00388720 |
| rosa_rugosa | Rorug03G0286300 Rorug03G0286400 |
| rosa_samantha | Rh3AG331000 Rh3BG367000 Rh3BG367200 Rh3BG367400 Rh3BG367600 Rh3CG363700 Rh3DG367000 |
| rosa_wichuraiana | Rw3G028990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1002 |
| AciI | CCGC | 3 cut(s) | 90, 839, 1145 |
| AclWI | GGATC | 2 cut(s) | 348, 624 |
| AcsI | RAATTY | 1 cut(s) | 826 |
| AcuI | CTGAAG | 1 cut(s) | 176 |
| AcyI | GRCGYC | 1 cut(s) | 999 |
| AgsI | TTSAA | 5 cut(s) | 17, 128, 235, 878, 1058 |
| AjnI | CCWGG | 1 cut(s) | 866 |
| AluBI | AGCT | 4 cut(s) | 478, 508, 1021, 1094 |
| AluI | AGCT | 4 cut(s) | 478, 508, 1021, 1094 |
| Alw26I | GTCTC | 1 cut(s) | 1112 |
| AlwI | GGATC | 2 cut(s) | 348, 624 |
| AoxI | GGCC | 1 cut(s) | 852 |
| ApeKI | GCWGC | 1 cut(s) | 1136 |
| ApoI | RAATTY | 1 cut(s) | 826 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 755, 787 |
| AseI | ATTAAT | 1 cut(s) | 1032 |
| AsuHPI | GGTGA | 2 cut(s) | 104, 419 |
| BanII | GRGCYC | 1 cut(s) | 320 |
| BbsI | GAAGAC | 2 cut(s) | 12, 245 |
| BbvI | GCAGC | 1 cut(s) | 1148 |
| BccI | CCATC | 2 cut(s) | 323, 787 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 982, 1016 |
| BciT130I | CCWGG | 1 cut(s) | 868 |
| BclI | TGATCA | 1 cut(s) | 63 |
| BcoDI | GTCTC | 1 cut(s) | 1112 |
| BfaI | CTAG | 2 cut(s) | 86, 1022 |
| BisI | GCNGC | 2 cut(s) | 1137, 1146 |
| BlsI | GCNGC | 2 cut(s) | 1138, 1147 |
| Bme1390I | CCNGG | 1 cut(s) | 868 |
| BmiI | GGNNCC | 1 cut(s) | 865 |
| BmrFI | CCNGG | 1 cut(s) | 868 |
| BmrI | ACTGGG | 1 cut(s) | 321 |
| BmsI | GCATC | 3 cut(s) | 67, 826, 1123 |
| BmuI | ACTGGG | 1 cut(s) | 321 |
| BpiI | GAAGAC | 2 cut(s) | 12, 245 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1112, 1144 |
| BpuEI | CTTGAG | 2 cut(s) | 494, 1080 |
| BsaHI | GRCGYC | 1 cut(s) | 999 |
| BsaJI | CCNNGG | 3 cut(s) | 72, 99, 867 |
| Bse1I | ACTGG | 1 cut(s) | 316 |
| Bse3DI | GCAATG | 1 cut(s) | 535 |
| BseBI | CCWGG | 1 cut(s) | 868 |
| BseDI | CCNNGG | 3 cut(s) | 72, 99, 867 |
| BseGI | GGATG | 4 cut(s) | 82, 457, 637, 841 |
| BseMI | GCAATG | 1 cut(s) | 535 |
| BseMII | CTCAG | 3 cut(s) | 105, 333, 1143 |
| BseNI | ACTGG | 1 cut(s) | 316 |
| BseRI | GAGGAG | 6 cut(s) | 188, 191, 194, 626, 818, 920 |
| BseXI | GCAGC | 1 cut(s) | 1148 |
| BshFI | GGCC | 1 cut(s) | 854 |
| BsmAI | GTCTC | 1 cut(s) | 1112 |
| BsmI | GAATGC | 1 cut(s) | 428 |
| BsnI | GGCC | 1 cut(s) | 854 |
| Bsp1286I | GDGCHC | 1 cut(s) | 320 |
| Bsp143I | GATC | 3 cut(s) | 63, 340, 616 |
| BspACI | CCGC | 3 cut(s) | 90, 839, 1145 |
| BspANI | GGCC | 1 cut(s) | 854 |
| BspCNI | CTCAG | 3 cut(s) | 106, 332, 1142 |
| BspHI | TCATGA | 1 cut(s) | 1074 |
| BspLI | GGNNCC | 1 cut(s) | 865 |
| BspPI | GGATC | 2 cut(s) | 348, 624 |
| BspQI | GCTCTTC | 1 cut(s) | 468 |
| BsrDI | GCAATG | 1 cut(s) | 535 |
| BsrI | ACTGG | 1 cut(s) | 316 |
| BssECI | CCNNGG | 3 cut(s) | 72, 99, 867 |
| BssMI | GATC | 3 cut(s) | 63, 340, 616 |
| BssNI | GRCGYC | 1 cut(s) | 999 |
| BssT1I | CCWWGG | 2 cut(s) | 72, 99 |
| Bst2UI | CCWGG | 1 cut(s) | 868 |
| Bst6I | CTCTTC | 8 cut(s) | 222, 408, 468, 486, 537, 576, 603, 780 |
| BstACI | GRCGYC | 1 cut(s) | 999 |
| BstDEI | CTNAG | 4 cut(s) | 114, 319, 459, 1129 |
| BstF5I | GGATG | 4 cut(s) | 82, 457, 637, 841 |
| BstKTI | GATC | 3 cut(s) | 66, 343, 619 |
| BstMAI | GTCTC | 1 cut(s) | 1112 |
| BstMBI | GATC | 3 cut(s) | 63, 340, 616 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1142, 1145 |
| BstNI | CCWGG | 1 cut(s) | 868 |
| BstSCI | CCNGG | 1 cut(s) | 866 |
| BstV1I | GCAGC | 1 cut(s) | 1148 |
| BstV2I | GAAGAC | 2 cut(s) | 12, 245 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 145 |
| BsuRI | GGCC | 1 cut(s) | 854 |
| BtsCI | GGATG | 4 cut(s) | 82, 457, 637, 841 |
| CciI | TCATGA | 1 cut(s) | 1074 |
| CviAII | CATG | 1 cut(s) | 1075 |
| CviJI | RGCY | 7 cut(s) | 160, 318, 478, 508, 854, 1021, 1094 |
| CviKI_1 | RGCY | 7 cut(s) | 160, 318, 478, 508, 854, 1021, 1094 |
| DdeI | CTNAG | 4 cut(s) | 114, 319, 459, 1129 |
| DpnI | GATC | 3 cut(s) | 65, 342, 618 |
| DpnII | GATC | 3 cut(s) | 63, 340, 616 |
| Eam1104I | CTCTTC | 8 cut(s) | 222, 408, 468, 486, 537, 576, 603, 780 |
| EarI | CTCTTC | 8 cut(s) | 222, 408, 468, 486, 537, 576, 603, 780 |
| Eco130I | CCWWGG | 2 cut(s) | 72, 99 |
| Eco24I | GRGCYC | 1 cut(s) | 320 |
| Eco32I | GATATC | 1 cut(s) | 1072 |
| Eco57I | CTGAAG | 1 cut(s) | 176 |
| EcoRII | CCWGG | 1 cut(s) | 866 |
| EcoRV | GATATC | 1 cut(s) | 1072 |
| EcoT14I | CCWWGG | 2 cut(s) | 72, 99 |
| EcoT38I | GRGCYC | 1 cut(s) | 320 |
| ErhI | CCWWGG | 2 cut(s) | 72, 99 |
| FaeI | CATG | 1 cut(s) | 1078 |
| FaiI | YATR | 3 cut(s) | 168, 696, 1076 |
| FatI | CATG | 1 cut(s) | 1074 |
| FbaI | TGATCA | 1 cut(s) | 63 |
| Fnu4HI | GCNGC | 2 cut(s) | 1137, 1146 |
| FokI | GGATG | 4 cut(s) | 89, 464, 644, 848 |
| FriOI | GRGCYC | 1 cut(s) | 320 |
| Fsp4HI | GCNGC | 2 cut(s) | 1137, 1146 |
| FspBI | CTAG | 2 cut(s) | 86, 1022 |
| GluI | GCNGC | 2 cut(s) | 1137, 1146 |
| HaeIII | GGCC | 1 cut(s) | 854 |
| Hin1I | GRCGYC | 1 cut(s) | 999 |
| Hin1II | CATG | 1 cut(s) | 1078 |
| HincII | GTYRAC | 1 cut(s) | 40 |
| HindII | GTYRAC | 1 cut(s) | 40 |
| HinfI | GANTC | 4 cut(s) | 95, 455, 896, 1121 |
| HpaI | GTTAAC | 1 cut(s) | 40 |
| HphI | GGTGA | 2 cut(s) | 104, 419 |
| Hpy166II | GTNNAC | 1 cut(s) | 40 |
| Hpy188I | TCNGA | 6 cut(s) | 322, 904, 1004, 1011, 1120, 1132 |
| Hpy188III | TCNNGA | 4 cut(s) | 67, 620, 1075, 1152 |
| Hpy8I | GTNNAC | 1 cut(s) | 40 |
| Hpy99I | CGWCG | 3 cut(s) | 904, 1001, 1004 |
| HpyCH4IV | ACGT | 1 cut(s) | 999 |
| HpyCH4V | TGCA | 4 cut(s) | 80, 426, 993, 1136 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1142, 1145 |
| HpyF3I | CTNAG | 4 cut(s) | 114, 319, 459, 1129 |
| HpySE526I | ACGT | 1 cut(s) | 999 |
| Hsp92I | GRCGYC | 1 cut(s) | 999 |
| Hsp92II | CATG | 1 cut(s) | 1078 |
| Ksp22I | TGATCA | 1 cut(s) | 63 |
| KspAI | GTTAAC | 1 cut(s) | 40 |
| Kzo9I | GATC | 3 cut(s) | 63, 340, 616 |
| LguI | GCTCTTC | 1 cut(s) | 468 |
| LpnPI | CCDG | 5 cut(s) | 297, 464, 548, 853, 880 |
| Lsp1109I | GCAGC | 1 cut(s) | 1148 |
| LweI | GCATC | 3 cut(s) | 67, 826, 1123 |
| MaeI | CTAG | 2 cut(s) | 86, 1022 |
| MaeII | ACGT | 1 cut(s) | 999 |
| MaeIII | GTNAC | 1 cut(s) | 92 |
| MalI | GATC | 3 cut(s) | 65, 342, 618 |
| MboI | GATC | 3 cut(s) | 63, 340, 616 |
| MhlI | GDGCHC | 1 cut(s) | 320 |
| MluCI | AATT | 1 cut(s) | 826 |
| MlyI | GAGTC | 3 cut(s) | 89, 905, 1130 |
| MmeI | TCCRAC | 2 cut(s) | 882, 982 |
| MseI | TTAA | 4 cut(s) | 39, 447, 558, 1032 |
| MspR9I | CCNGG | 1 cut(s) | 868 |
| Mva1269I | GAATGC | 1 cut(s) | 428 |
| MvaI | CCWGG | 1 cut(s) | 868 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1142, 1145 |
| NdeII | GATC | 3 cut(s) | 63, 340, 616 |
| NlaIII | CATG | 1 cut(s) | 1078 |
| NlaIV | GGNNCC | 1 cut(s) | 865 |
| NmuCI | GTSAC | 1 cut(s) | 92 |
| PagI | TCATGA | 1 cut(s) | 1074 |
| PciSI | GCTCTTC | 1 cut(s) | 468 |
| PctI | GAATGC | 1 cut(s) | 428 |
| PfeI | GAWTC | 1 cut(s) | 455 |
| PflFI | GACNNNGTC | 1 cut(s) | 139 |
| PkrI | GCNGC | 2 cut(s) | 1138, 1147 |
| PleI | GAGTC | 3 cut(s) | 89, 904, 1129 |
| PpsI | GAGTC | 3 cut(s) | 89, 904, 1129 |
| PshBI | ATTAAT | 1 cut(s) | 1032 |
| Psp6I | CCWGG | 1 cut(s) | 866 |
| PspGI | CCWGG | 1 cut(s) | 866 |
| PspN4I | GGNNCC | 1 cut(s) | 865 |
| PsyI | GACNNNGTC | 1 cut(s) | 139 |
| SapI | GCTCTTC | 1 cut(s) | 468 |
| SaqAI | TTAA | 4 cut(s) | 39, 447, 558, 1032 |
| SatI | GCNGC | 2 cut(s) | 1137, 1146 |
| Sau3AI | GATC | 3 cut(s) | 63, 340, 616 |
| SchI | GAGTC | 3 cut(s) | 89, 905, 1130 |
| ScrFI | CCNGG | 1 cut(s) | 868 |
| SduI | GDGCHC | 1 cut(s) | 320 |
| SfaNI | GCATC | 3 cut(s) | 67, 826, 1123 |
| SmlI | CTYRAG | 2 cut(s) | 509, 1095 |
| SmoI | CTYRAG | 2 cut(s) | 509, 1095 |
| Sse9I | AATT | 1 cut(s) | 826 |
| SsiI | CCGC | 3 cut(s) | 90, 839, 1145 |
| SspMI | CTAG | 2 cut(s) | 86, 1022 |
| StyD4I | CCNGG | 1 cut(s) | 866 |
| StyI | CCWWGG | 2 cut(s) | 72, 99 |
| TaiI | ACGT | 1 cut(s) | 1002 |
| TaqI | TCGA | 1 cut(s) | 440 |
| TasI | AATT | 1 cut(s) | 826 |
| TauI | GCSGC | 1 cut(s) | 1148 |
| TfiI | GAWTC | 1 cut(s) | 455 |
| Tru1I | TTAA | 4 cut(s) | 39, 447, 558, 1032 |
| Tru9I | TTAA | 4 cut(s) | 39, 447, 558, 1032 |
| TseFI | GTSAC | 1 cut(s) | 92 |
| TseI | GCWGC | 1 cut(s) | 1136 |
| Tsp45I | GTSAC | 1 cut(s) | 92 |
| TspDTI | ATGAA | 9 cut(s) | 240, 417, 447, 504, 534, 657, 720, 792, 863 |
| Tth111I | GACNNNGTC | 1 cut(s) | 139 |
| VspI | ATTAAT | 1 cut(s) | 1032 |
| XapI | RAATTY | 1 cut(s) | 826 |
| XspI | CTAG | 2 cut(s) | 86, 1022 |
| ZraI | GACGTC | 1 cut(s) | 1000 |