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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G56660 AT1G56660 |
| fragaria_vesca | FvH4_1g28340 FvH4_1g28340 FvH4_1g28340 |
| malus_domestica | MD14G1004000.v1.1 |
| prunus_persica | Prupe.7G006500_v2.0.a1 |
| pyrus_communis | pycom12g00470 |
| rosa_chinensis | RchiOBHm_Chr3g0496751 |
| rosa_laevigata | RLG00000022508 |
| rosa_multiflora | Rmu_co8366833.1_g000001 Rmu_sc0000542.1_g000011 Rmu_sc0001832.1_g000015 |
| rosa_roxburghii | Rroxscaffold_6G00388720 |
| rosa_rugosa | Rorug03G0286300 Rorug03G0286400 |
| rosa_samantha | Rh3AG331000 Rh3BG367000 Rh3BG367200 Rh3BG367400 Rh3BG367600 Rh3CG363700 Rh3DG367000 |
| rosa_wichuraiana | Rw3G028990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 990 |
| AciI | CCGC | 3 cut(s) | 90, 827, 1133 |
| AclWI | GGATC | 1 cut(s) | 348 |
| AcuI | CTGAAG | 1 cut(s) | 176 |
| AcyI | GRCGYC | 2 cut(s) | 987, 1112 |
| AgsI | TTSAA | 5 cut(s) | 17, 128, 235, 641, 866 |
| AjnI | CCWGG | 1 cut(s) | 854 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1026, 1058 |
| AluBI | AGCT | 5 cut(s) | 475, 514, 997, 1009, 1082 |
| AluI | AGCT | 5 cut(s) | 475, 514, 997, 1009, 1082 |
| Alw26I | GTCTC | 3 cut(s) | 410, 1100, 1103 |
| AlwI | GGATC | 1 cut(s) | 348 |
| AoxI | GGCC | 1 cut(s) | 840 |
| ApeKI | GCWGC | 1 cut(s) | 1124 |
| AseI | ATTAAT | 1 cut(s) | 1020 |
| BanII | GRGCYC | 1 cut(s) | 320 |
| BbsI | GAAGAC | 2 cut(s) | 12, 639 |
| BbvI | GCAGC | 1 cut(s) | 1136 |
| BccI | CCATC | 2 cut(s) | 323, 775 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 970, 1004 |
| BciT130I | CCWGG | 1 cut(s) | 856 |
| BclI | TGATCA | 1 cut(s) | 63 |
| BcoDI | GTCTC | 3 cut(s) | 410, 1100, 1103 |
| BfaI | CTAG | 2 cut(s) | 86, 1010 |
| BisI | GCNGC | 3 cut(s) | 91, 1125, 1134 |
| BlsI | GCNGC | 3 cut(s) | 92, 1126, 1135 |
| Bme1390I | CCNGG | 1 cut(s) | 856 |
| BmiI | GGNNCC | 1 cut(s) | 853 |
| BmrFI | CCNGG | 1 cut(s) | 856 |
| BmsI | GCATC | 2 cut(s) | 67, 1111 |
| BpiI | GAAGAC | 2 cut(s) | 12, 639 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1100, 1132 |
| BpuEI | CTTGAG | 2 cut(s) | 500, 1068 |
| BsaHI | GRCGYC | 2 cut(s) | 987, 1112 |
| BsaJI | CCNNGG | 4 cut(s) | 72, 99, 855, 915 |
| BseBI | CCWGG | 1 cut(s) | 856 |
| BseDI | CCNNGG | 4 cut(s) | 72, 99, 855, 915 |
| BseGI | GGATG | 3 cut(s) | 82, 454, 634 |
| BseMII | CTCAG | 3 cut(s) | 105, 333, 1131 |
| BseRI | GAGGAG | 8 cut(s) | 185, 188, 191, 194, 803, 806, 905, 908 |
| BseXI | GCAGC | 1 cut(s) | 1136 |
| BshFI | GGCC | 1 cut(s) | 842 |
| BsmAI | GTCTC | 3 cut(s) | 410, 1100, 1103 |
| BsmBI | CGTCTC | 1 cut(s) | 1103 |
| BsmI | GAATGC | 1 cut(s) | 829 |
| BsnI | GGCC | 1 cut(s) | 842 |
| Bsp1286I | GDGCHC | 1 cut(s) | 320 |
| Bsp143I | GATC | 2 cut(s) | 63, 340 |
| BspACI | CCGC | 3 cut(s) | 90, 827, 1133 |
| BspANI | GGCC | 1 cut(s) | 842 |
| BspCNI | CTCAG | 3 cut(s) | 106, 332, 1130 |
| BspHI | TCATGA | 1 cut(s) | 1062 |
| BspLI | GGNNCC | 1 cut(s) | 853 |
| BspPI | GGATC | 1 cut(s) | 348 |
| BspQI | GCTCTTC | 2 cut(s) | 465, 609 |
| BssECI | CCNNGG | 4 cut(s) | 72, 99, 855, 915 |
| BssMI | GATC | 2 cut(s) | 63, 340 |
| BssNI | GRCGYC | 2 cut(s) | 987, 1112 |
| BssT1I | CCWWGG | 3 cut(s) | 72, 99, 915 |
| Bst2UI | CCWGG | 1 cut(s) | 856 |
| Bst6I | CTCTTC | 8 cut(s) | 222, 408, 465, 483, 543, 582, 609, 768 |
| BstACI | GRCGYC | 2 cut(s) | 987, 1112 |
| BstDEI | CTNAG | 4 cut(s) | 114, 319, 456, 1117 |
| BstF5I | GGATG | 3 cut(s) | 82, 454, 634 |
| BstKTI | GATC | 2 cut(s) | 66, 343 |
| BstMAI | GTCTC | 3 cut(s) | 410, 1100, 1103 |
| BstMBI | GATC | 2 cut(s) | 63, 340 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1130, 1133 |
| BstNI | CCWGG | 1 cut(s) | 856 |
| BstSCI | CCNGG | 1 cut(s) | 854 |
| BstV1I | GCAGC | 1 cut(s) | 1136 |
| BstV2I | GAAGAC | 2 cut(s) | 12, 639 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 145 |
| BsuRI | GGCC | 1 cut(s) | 842 |
| BtgZI | GCGATG | 1 cut(s) | 549 |
| BtsCI | GGATG | 3 cut(s) | 82, 454, 634 |
| BtsI | GCAGTG | 1 cut(s) | 1134 |
| BtsIMutI | CAGTG | 1 cut(s) | 1134 |
| CciI | TCATGA | 1 cut(s) | 1062 |
| CseI | GACGC | 1 cut(s) | 1120 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 292, 327 |
| CviAII | CATG | 1 cut(s) | 1063 |
| CviJI | RGCY | 8 cut(s) | 160, 318, 475, 514, 842, 997, 1009, 1082 |
| CviKI_1 | RGCY | 8 cut(s) | 160, 318, 475, 514, 842, 997, 1009, 1082 |
| DdeI | CTNAG | 4 cut(s) | 114, 319, 456, 1117 |
| DpnI | GATC | 2 cut(s) | 65, 342 |
| DpnII | GATC | 2 cut(s) | 63, 340 |
| Eam1104I | CTCTTC | 8 cut(s) | 222, 408, 465, 483, 543, 582, 609, 768 |
| EarI | CTCTTC | 8 cut(s) | 222, 408, 465, 483, 543, 582, 609, 768 |
| Eco130I | CCWWGG | 3 cut(s) | 72, 99, 915 |
| Eco24I | GRGCYC | 1 cut(s) | 320 |
| Eco32I | GATATC | 1 cut(s) | 1060 |
| Eco57I | CTGAAG | 1 cut(s) | 176 |
| EcoRII | CCWGG | 1 cut(s) | 854 |
| EcoRV | GATATC | 1 cut(s) | 1060 |
| EcoT14I | CCWWGG | 3 cut(s) | 72, 99, 915 |
| EcoT38I | GRGCYC | 1 cut(s) | 320 |
| ErhI | CCWWGG | 3 cut(s) | 72, 99, 915 |
| Esp3I | CGTCTC | 1 cut(s) | 1103 |
| FaeI | CATG | 1 cut(s) | 1066 |
| FaiI | YATR | 6 cut(s) | 168, 424, 434, 621, 687, 1064 |
| FatI | CATG | 1 cut(s) | 1062 |
| FbaI | TGATCA | 1 cut(s) | 63 |
| Fnu4HI | GCNGC | 3 cut(s) | 91, 1125, 1134 |
| FokI | GGATG | 3 cut(s) | 89, 461, 641 |
| FriOI | GRGCYC | 1 cut(s) | 320 |
| Fsp4HI | GCNGC | 3 cut(s) | 91, 1125, 1134 |
| FspBI | CTAG | 2 cut(s) | 86, 1010 |
| GluI | GCNGC | 3 cut(s) | 91, 1125, 1134 |
| HaeIII | GGCC | 1 cut(s) | 842 |
| HgaI | GACGC | 1 cut(s) | 1120 |
| Hin1I | GRCGYC | 2 cut(s) | 987, 1112 |
| Hin1II | CATG | 1 cut(s) | 1066 |
| HincII | GTYRAC | 1 cut(s) | 40 |
| HindII | GTYRAC | 1 cut(s) | 40 |
| HinfI | GANTC | 3 cut(s) | 95, 452, 884 |
| HpaI | GTTAAC | 1 cut(s) | 40 |
| Hpy166II | GTNNAC | 1 cut(s) | 40 |
| Hpy188I | TCNGA | 6 cut(s) | 244, 322, 889, 992, 1108, 1120 |
| Hpy188III | TCNNGA | 3 cut(s) | 67, 1063, 1140 |
| Hpy8I | GTNNAC | 1 cut(s) | 40 |
| Hpy99I | CGWCG | 2 cut(s) | 989, 992 |
| HpyAV | CCTTC | 7 cut(s) | 112, 256, 553, 644, 793, 832, 928 |
| HpyCH4IV | ACGT | 1 cut(s) | 987 |
| HpyCH4V | TGCA | 4 cut(s) | 80, 426, 981, 1124 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1130, 1133 |
| HpyF3I | CTNAG | 4 cut(s) | 114, 319, 456, 1117 |
| HpySE526I | ACGT | 1 cut(s) | 987 |
| Hsp92I | GRCGYC | 2 cut(s) | 987, 1112 |
| Hsp92II | CATG | 1 cut(s) | 1066 |
| Ksp22I | TGATCA | 1 cut(s) | 63 |
| KspAI | GTTAAC | 1 cut(s) | 40 |
| Kzo9I | GATC | 2 cut(s) | 63, 340 |
| LguI | GCTCTTC | 2 cut(s) | 465, 609 |
| LpnPI | CCDG | 4 cut(s) | 461, 554, 841, 868 |
| Lsp1109I | GCAGC | 1 cut(s) | 1136 |
| LweI | GCATC | 2 cut(s) | 67, 1111 |
| MaeI | CTAG | 2 cut(s) | 86, 1010 |
| MaeII | ACGT | 1 cut(s) | 987 |
| MalI | GATC | 2 cut(s) | 65, 342 |
| MboI | GATC | 2 cut(s) | 63, 340 |
| MhlI | GDGCHC | 1 cut(s) | 320 |
| MluCI | AATT | 1 cut(s) | 427 |
| MlyI | GAGTC | 2 cut(s) | 89, 893 |
| MmeI | TCCRAC | 3 cut(s) | 867, 970, 1024 |
| MseI | TTAA | 4 cut(s) | 39, 444, 564, 1020 |
| MslI | CAYNNNNRTG | 1 cut(s) | 813 |
| MspR9I | CCNGG | 1 cut(s) | 856 |
| Mva1269I | GAATGC | 1 cut(s) | 829 |
| MvaI | CCWGG | 1 cut(s) | 856 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1130, 1133 |
| NdeII | GATC | 2 cut(s) | 63, 340 |
| NlaIII | CATG | 1 cut(s) | 1066 |
| NlaIV | GGNNCC | 1 cut(s) | 853 |
| PagI | TCATGA | 1 cut(s) | 1062 |
| PciSI | GCTCTTC | 2 cut(s) | 465, 609 |
| PctI | GAATGC | 1 cut(s) | 829 |
| PfeI | GAWTC | 1 cut(s) | 452 |
| PflFI | GACNNNGTC | 1 cut(s) | 139 |
| PkrI | GCNGC | 3 cut(s) | 92, 1126, 1135 |
| PleI | GAGTC | 2 cut(s) | 89, 892 |
| PpsI | GAGTC | 2 cut(s) | 89, 892 |
| PshBI | ATTAAT | 1 cut(s) | 1020 |
| Psp6I | CCWGG | 1 cut(s) | 854 |
| PspGI | CCWGG | 1 cut(s) | 854 |
| PspN4I | GGNNCC | 1 cut(s) | 853 |
| PsyI | GACNNNGTC | 1 cut(s) | 139 |
| RseI | CAYNNNNRTG | 1 cut(s) | 813 |
| SapI | GCTCTTC | 2 cut(s) | 465, 609 |
| SaqAI | TTAA | 4 cut(s) | 39, 444, 564, 1020 |
| SatI | GCNGC | 3 cut(s) | 91, 1125, 1134 |
| Sau3AI | GATC | 2 cut(s) | 63, 340 |
| SchI | GAGTC | 2 cut(s) | 89, 893 |
| ScrFI | CCNGG | 1 cut(s) | 856 |
| SduI | GDGCHC | 1 cut(s) | 320 |
| SfaNI | GCATC | 2 cut(s) | 67, 1111 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 813 |
| SmlI | CTYRAG | 2 cut(s) | 515, 1083 |
| SmoI | CTYRAG | 2 cut(s) | 515, 1083 |
| Sse9I | AATT | 1 cut(s) | 427 |
| SsiI | CCGC | 3 cut(s) | 90, 827, 1133 |
| SspMI | CTAG | 2 cut(s) | 86, 1010 |
| StyD4I | CCNGG | 1 cut(s) | 854 |
| StyI | CCWWGG | 3 cut(s) | 72, 99, 915 |
| TaiI | ACGT | 1 cut(s) | 990 |
| TaqI | TCGA | 1 cut(s) | 437 |
| TasI | AATT | 1 cut(s) | 427 |
| TauI | GCSGC | 2 cut(s) | 93, 1136 |
| TfiI | GAWTC | 1 cut(s) | 452 |
| Tru1I | TTAA | 4 cut(s) | 39, 444, 564, 1020 |
| Tru9I | TTAA | 4 cut(s) | 39, 444, 564, 1020 |
| TscAI | CASTG | 1 cut(s) | 1134 |
| TseI | GCWGC | 1 cut(s) | 1124 |
| TspDTI | ATGAA | 8 cut(s) | 240, 417, 501, 540, 645, 711, 780, 851 |
| TspRI | CASTG | 1 cut(s) | 1134 |
| Tth111I | GACNNNGTC | 1 cut(s) | 139 |
| VspI | ATTAAT | 1 cut(s) | 1020 |
| XspI | CTAG | 2 cut(s) | 86, 1010 |
| ZraI | GACGTC | 1 cut(s) | 988 |