source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0087751 RchiOBHm_Chr2g0088051 RchiOBHm_Chr2g0105621 RchiOBHm_Chr4g0441621 RchiOBHm_Chr7g0241891 |
| rosa_multiflora | Rmu_sc0024795.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00278210 Rroxscaffold_4G00278230 Rroxscaffold_5G00385410 Rroxscaffold_7G00177440 Rroxscaffold_7G00216970 |
| rosa_samantha | Rh2BG286600 Rh2BG436500 Rh2DG186600 Rh2DG282200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 342 |
| AccII | CGCG | 1 cut(s) | 117 |
| AcsI | RAATTY | 1 cut(s) | 241 |
| AfaI | GTAC | 2 cut(s) | 174, 232 |
| AgsI | TTSAA | 2 cut(s) | 241, 247 |
| AjnI | CCWGG | 1 cut(s) | 285 |
| AluBI | AGCT | 1 cut(s) | 293 |
| AluI | AGCT | 1 cut(s) | 293 |
| Alw26I | GTCTC | 2 cut(s) | 272, 279 |
| ApeKI | GCWGC | 1 cut(s) | 16 |
| ApoI | RAATTY | 1 cut(s) | 241 |
| AsuHPI | GGTGA | 1 cut(s) | 74 |
| BbvI | GCAGC | 1 cut(s) | 3 |
| BccI | CCATC | 1 cut(s) | 257 |
| BciT130I | CCWGG | 1 cut(s) | 287 |
| BcoDI | GTCTC | 2 cut(s) | 272, 279 |
| BfaI | CTAG | 1 cut(s) | 346 |
| BglII | AGATCT | 1 cut(s) | 310 |
| BisI | GCNGC | 1 cut(s) | 17 |
| BlsI | GCNGC | 1 cut(s) | 18 |
| Bme1390I | CCNGG | 1 cut(s) | 287 |
| BmrFI | CCNGG | 1 cut(s) | 287 |
| BsaI | GGTCTC | 1 cut(s) | 272 |
| BseBI | CCWGG | 1 cut(s) | 287 |
| BseXI | GCAGC | 1 cut(s) | 3 |
| Bsh1236I | CGCG | 1 cut(s) | 117 |
| BsmAI | GTCTC | 2 cut(s) | 272, 279 |
| Bso31I | GGTCTC | 1 cut(s) | 272 |
| Bsp143I | GATC | 1 cut(s) | 310 |
| BspFNI | CGCG | 1 cut(s) | 117 |
| BspTNI | GGTCTC | 1 cut(s) | 272 |
| BssMI | GATC | 1 cut(s) | 310 |
| BssNAI | GTATAC | 1 cut(s) | 343 |
| Bst1107I | GTATAC | 1 cut(s) | 343 |
| Bst2UI | CCWGG | 1 cut(s) | 287 |
| Bst6I | CTCTTC | 2 cut(s) | 44, 89 |
| BstFNI | CGCG | 1 cut(s) | 117 |
| BstKTI | GATC | 1 cut(s) | 313 |
| BstMAI | GTCTC | 2 cut(s) | 272, 279 |
| BstMBI | GATC | 1 cut(s) | 310 |
| BstNI | CCWGG | 1 cut(s) | 287 |
| BstSCI | CCNGG | 1 cut(s) | 285 |
| BstUI | CGCG | 1 cut(s) | 117 |
| BstV1I | GCAGC | 1 cut(s) | 3 |
| BstX2I | RGATCY | 1 cut(s) | 310 |
| BstYI | RGATCY | 1 cut(s) | 310 |
| BstZ17I | GTATAC | 1 cut(s) | 343 |
| BtgZI | GCGATG | 1 cut(s) | 98 |
| Csp6I | GTAC | 2 cut(s) | 173, 231 |
| CviAII | CATG | 1 cut(s) | 271 |
| CviJI | RGCY | 2 cut(s) | 16, 293 |
| CviKI_1 | RGCY | 2 cut(s) | 16, 293 |
| CviQI | GTAC | 2 cut(s) | 173, 231 |
| DpnI | GATC | 1 cut(s) | 312 |
| DpnII | GATC | 1 cut(s) | 310 |
| Eam1104I | CTCTTC | 2 cut(s) | 44, 89 |
| EarI | CTCTTC | 2 cut(s) | 44, 89 |
| Eco31I | GGTCTC | 1 cut(s) | 272 |
| EcoRII | CCWGG | 1 cut(s) | 285 |
| EcoT22I | ATGCAT | 1 cut(s) | 198 |
| FaeI | CATG | 1 cut(s) | 274 |
| FatI | CATG | 1 cut(s) | 270 |
| FauNDI | CATATG | 1 cut(s) | 337 |
| FblI | GTMKAC | 1 cut(s) | 342 |
| Fnu4HI | GCNGC | 1 cut(s) | 17 |
| Fsp4HI | GCNGC | 1 cut(s) | 17 |
| FspBI | CTAG | 1 cut(s) | 346 |
| GluI | GCNGC | 1 cut(s) | 17 |
| Hin1II | CATG | 1 cut(s) | 274 |
| HphI | GGTGA | 1 cut(s) | 74 |
| Hpy166II | GTNNAC | 2 cut(s) | 233, 343 |
| Hpy8I | GTNNAC | 2 cut(s) | 233, 343 |
| HpyAV | CCTTC | 3 cut(s) | 76, 154, 241 |
| HpyCH4IV | ACGT | 2 cut(s) | 175, 189 |
| HpyCH4V | TGCA | 3 cut(s) | 19, 196, 298 |
| HpySE526I | ACGT | 2 cut(s) | 175, 189 |
| Hsp92II | CATG | 1 cut(s) | 274 |
| Kzo9I | GATC | 1 cut(s) | 310 |
| LpnPI | CCDG | 2 cut(s) | 272, 299 |
| Lsp1109I | GCAGC | 1 cut(s) | 3 |
| MaeI | CTAG | 1 cut(s) | 346 |
| MaeII | ACGT | 2 cut(s) | 175, 189 |
| MaeIII | GTNAC | 1 cut(s) | 62 |
| MalI | GATC | 1 cut(s) | 312 |
| MboI | GATC | 1 cut(s) | 310 |
| MboII | GAAGA | 4 cut(s) | 61, 106, 133, 217 |
| MflI | RGATCY | 1 cut(s) | 310 |
| MluCI | AATT | 2 cut(s) | 20, 241 |
| MnlI | CCTC | 2 cut(s) | 45, 120 |
| Mph1103I | ATGCAT | 1 cut(s) | 198 |
| MspR9I | CCNGG | 1 cut(s) | 287 |
| MvaI | CCWGG | 1 cut(s) | 287 |
| MvnI | CGCG | 1 cut(s) | 117 |
| NdeI | CATATG | 1 cut(s) | 337 |
| NdeII | GATC | 1 cut(s) | 310 |
| NlaIII | CATG | 1 cut(s) | 274 |
| NmuCI | GTSAC | 1 cut(s) | 62 |
| NsiI | ATGCAT | 1 cut(s) | 198 |
| PkrI | GCNGC | 1 cut(s) | 18 |
| Psp6I | CCWGG | 1 cut(s) | 285 |
| PspGI | CCWGG | 1 cut(s) | 285 |
| PsuI | RGATCY | 1 cut(s) | 310 |
| RsaI | GTAC | 2 cut(s) | 174, 232 |
| RsaNI | GTAC | 2 cut(s) | 173, 231 |
| SatI | GCNGC | 1 cut(s) | 17 |
| Sau3AI | GATC | 1 cut(s) | 310 |
| ScrFI | CCNGG | 1 cut(s) | 287 |
| SetI | ASST | 7 cut(s) | 64, 112, 165, 178, 192, 288, 295 |
| Sse9I | AATT | 2 cut(s) | 20, 241 |
| SspI | AATATT | 1 cut(s) | 138 |
| SspMI | CTAG | 1 cut(s) | 346 |
| StyD4I | CCNGG | 1 cut(s) | 285 |
| TaiI | ACGT | 2 cut(s) | 178, 192 |
| TaqI | TCGA | 1 cut(s) | 144 |
| TasI | AATT | 2 cut(s) | 20, 241 |
| TseFI | GTSAC | 1 cut(s) | 62 |
| TseI | GCWGC | 1 cut(s) | 16 |
| Tsp45I | GTSAC | 1 cut(s) | 62 |
| TspDTI | ATGAA | 1 cut(s) | 324 |
| XapI | RAATTY | 1 cut(s) | 241 |
| XmiI | GTMKAC | 1 cut(s) | 342 |
| XspI | CTAG | 1 cut(s) | 346 |
| Zsp2I | ATGCAT | 1 cut(s) | 198 |