50S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G45020 AT3G45020 AT3G45020 AT3G45020 |
| fragaria_vesca | FvH4_3g31090 FvH4_3g31090 FvH4_3g31090 FvH4_3g31090 |
| malus_domestica | MD00G1033500.v1.1 |
| prunus_persica | Prupe.6G108700_v2.0.a1 |
| pyrus_communis | pycom11g11870 |
| rosa_chinensis | RchiOBHm_Chr4g0444611 RchiOBHm_Chr5g0057731 |
| rosa_laevigata | RLG00000005818 RLG00000035172 |
| rosa_multiflora | Rmu_sc0001849.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00022760 |
| rosa_rugosa | Rorug05G0309100 Rorug05G0309100 Rorug05G0309100 |
| rosa_samantha | Rh4AG414300 Rh4BG425900 Rh4CG440600 Rh4DG421600 Rh5BG388500 Rh5CG412900 Rh5DG402800 |
| rosa_wichuraiana | Rw5G035590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 288 |
| AccBSI | CCGCTC | 1 cut(s) | 138 |
| AciI | CCGC | 3 cut(s) | 7, 19, 136 |
| AclI | AACGTT | 1 cut(s) | 54 |
| AcoI | YGGCCR | 3 cut(s) | 73, 133, 365 |
| AfaI | GTAC | 3 cut(s) | 41, 280, 324 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 217, 283, 288 |
| AflII | CTTAAG | 1 cut(s) | 308 |
| AgsI | TTSAA | 3 cut(s) | 37, 104, 170 |
| AjiI | CACGTC | 1 cut(s) | 235 |
| AjnI | CCWGG | 1 cut(s) | 210 |
| AleI | CACNNNNGTG | 1 cut(s) | 127 |
| Alw21I | GWGCWC | 1 cut(s) | 180 |
| Ama87I | CYCGRG | 1 cut(s) | 125 |
| AoxI | GGCC | 3 cut(s) | 73, 133, 365 |
| ApeKI | GCWGC | 2 cut(s) | 155, 158 |
| AsuC2I | CCSGG | 1 cut(s) | 364 |
| AvaI | CYCGRG | 1 cut(s) | 125 |
| BanII | GRGCYC | 1 cut(s) | 122 |
| Bbv12I | GWGCWC | 1 cut(s) | 180 |
| BbvI | GCAGC | 2 cut(s) | 167, 170 |
| BciT130I | CCWGG | 1 cut(s) | 212 |
| BcnI | CCSGG | 1 cut(s) | 364 |
| BfrI | CTTAAG | 1 cut(s) | 308 |
| BisI | GCNGC | 3 cut(s) | 136, 156, 159 |
| BlsI | GCNGC | 3 cut(s) | 137, 157, 160 |
| BmcAI | AGTACT | 1 cut(s) | 324 |
| Bme1390I | CCNGG | 2 cut(s) | 212, 364 |
| BmeT110I | CYCGRG | 1 cut(s) | 125 |
| BmgBI | CACGTC | 1 cut(s) | 235 |
| BmrFI | CCNGG | 2 cut(s) | 212, 364 |
| BmsI | GCATC | 1 cut(s) | 101 |
| BpuMI | CCSGG | 1 cut(s) | 364 |
| BsaJI | CCNNGG | 2 cut(s) | 211, 282 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 217, 283, 288 |
| BseBI | CCWGG | 1 cut(s) | 212 |
| BseDI | CCNNGG | 2 cut(s) | 211, 282 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 217, 283, 288 |
| BseXI | GCAGC | 2 cut(s) | 167, 170 |
| BshFI | GGCC | 3 cut(s) | 75, 135, 367 |
| BsiHKAI | GWGCWC | 1 cut(s) | 180 |
| BsiHKCI | CYCGRG | 1 cut(s) | 125 |
| BsiSI | CCGG | 1 cut(s) | 364 |
| BslFI | GGGAC | 2 cut(s) | 228, 234 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 217, 283, 288 |
| BsmFI | GGGAC | 2 cut(s) | 228, 234 |
| BsnI | GGCC | 3 cut(s) | 75, 135, 367 |
| BsoBI | CYCGRG | 1 cut(s) | 125 |
| Bsp1286I | GDGCHC | 2 cut(s) | 122, 180 |
| BspACI | CCGC | 3 cut(s) | 7, 19, 136 |
| BspANI | GGCC | 3 cut(s) | 75, 135, 367 |
| BspTI | CTTAAG | 1 cut(s) | 308 |
| BsrBI | CCGCTC | 1 cut(s) | 138 |
| BssECI | CCNNGG | 2 cut(s) | 211, 282 |
| BssT1I | CCWWGG | 1 cut(s) | 282 |
| Bst2UI | CCWGG | 1 cut(s) | 212 |
| Bst4CI | ACNGT | 1 cut(s) | 278 |
| BstAFI | CTTAAG | 1 cut(s) | 308 |
| BstC8I | GCNNGC | 1 cut(s) | 180 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 141, 155, 184 |
| BstNI | CCWGG | 1 cut(s) | 212 |
| BstSCI | CCNGG | 2 cut(s) | 210, 362 |
| BstV1I | GCAGC | 2 cut(s) | 167, 170 |
| BsuRI | GGCC | 3 cut(s) | 75, 135, 367 |
| BtrI | CACGTC | 1 cut(s) | 235 |
| BtsI | GCAGTG | 1 cut(s) | 14 |
| BtsIMutI | CAGTG | 1 cut(s) | 14 |
| Cac8I | GCNNGC | 1 cut(s) | 180 |
| Csp6I | GTAC | 3 cut(s) | 40, 279, 323 |
| CviJI | RGCY | 5 cut(s) | 75, 120, 135, 293, 367 |
| CviKI_1 | RGCY | 5 cut(s) | 75, 120, 135, 293, 367 |
| CviQI | GTAC | 3 cut(s) | 40, 279, 323 |
| EaeI | YGGCCR | 3 cut(s) | 73, 133, 365 |
| Eco130I | CCWWGG | 1 cut(s) | 282 |
| Eco24I | GRGCYC | 1 cut(s) | 122 |
| Eco88I | CYCGRG | 1 cut(s) | 125 |
| EcoRII | CCWGG | 1 cut(s) | 210 |
| EcoT14I | CCWWGG | 1 cut(s) | 282 |
| EcoT38I | GRGCYC | 1 cut(s) | 122 |
| ErhI | CCWWGG | 1 cut(s) | 282 |
| FaiI | YATR | 4 cut(s) | 12, 29, 185, 289 |
| FaqI | GGGAC | 2 cut(s) | 228, 234 |
| Fnu4HI | GCNGC | 3 cut(s) | 136, 156, 159 |
| FriOI | GRGCYC | 1 cut(s) | 122 |
| Fsp4HI | GCNGC | 3 cut(s) | 136, 156, 159 |
| GluI | GCNGC | 3 cut(s) | 136, 156, 159 |
| HaeIII | GGCC | 3 cut(s) | 75, 135, 367 |
| HapII | CCGG | 1 cut(s) | 364 |
| HincII | GTYRAC | 1 cut(s) | 61 |
| HindII | GTYRAC | 1 cut(s) | 61 |
| HinfI | GANTC | 1 cut(s) | 229 |
| HpaII | CCGG | 1 cut(s) | 364 |
| Hpy166II | GTNNAC | 1 cut(s) | 61 |
| Hpy188III | TCNNGA | 2 cut(s) | 206, 338 |
| Hpy8I | GTNNAC | 1 cut(s) | 61 |
| HpyAV | CCTTC | 2 cut(s) | 194, 256 |
| HpyCH4III | ACNGT | 1 cut(s) | 278 |
| HpyCH4IV | ACGT | 2 cut(s) | 54, 234 |
| HpyCH4V | TGCA | 3 cut(s) | 14, 144, 187 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 141, 155, 184 |
| HpySE526I | ACGT | 2 cut(s) | 54, 234 |
| LpnPI | CCDG | 3 cut(s) | 197, 203, 224 |
| Lsp1109I | GCAGC | 2 cut(s) | 167, 170 |
| LweI | GCATC | 1 cut(s) | 101 |
| MaeII | ACGT | 2 cut(s) | 54, 234 |
| MaeIII | GTNAC | 1 cut(s) | 85 |
| MbiI | CCGCTC | 1 cut(s) | 138 |
| MboII | GAAGA | 2 cut(s) | 271, 362 |
| MfeI | CAATTG | 1 cut(s) | 99 |
| MhlI | GDGCHC | 2 cut(s) | 122, 180 |
| MluCI | AATT | 2 cut(s) | 78, 99 |
| MnlI | CCTC | 2 cut(s) | 218, 244 |
| MseI | TTAA | 5 cut(s) | 114, 270, 309, 327, 373 |
| MslI | CAYNNNNRTG | 2 cut(s) | 127, 237 |
| MspCI | CTTAAG | 1 cut(s) | 308 |
| MspI | CCGG | 1 cut(s) | 364 |
| MspR9I | CCNGG | 2 cut(s) | 212, 364 |
| MunI | CAATTG | 1 cut(s) | 99 |
| MvaI | CCWGG | 1 cut(s) | 212 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 141, 155, 184 |
| NciI | CCSGG | 1 cut(s) | 364 |
| OliI | CACNNNNGTG | 1 cut(s) | 127 |
| PaeR7I | CTCGAG | 1 cut(s) | 125 |
| PfeI | GAWTC | 1 cut(s) | 229 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 288 |
| PkrI | GCNGC | 3 cut(s) | 137, 157, 160 |
| Psp1406I | AACGTT | 1 cut(s) | 54 |
| Psp6I | CCWGG | 1 cut(s) | 210 |
| PspGI | CCWGG | 1 cut(s) | 210 |
| PspXI | VCTCGAGB | 1 cut(s) | 125 |
| RsaI | GTAC | 3 cut(s) | 41, 280, 324 |
| RsaNI | GTAC | 3 cut(s) | 40, 279, 323 |
| RseI | CAYNNNNRTG | 2 cut(s) | 127, 237 |
| SaqAI | TTAA | 5 cut(s) | 114, 270, 309, 327, 373 |
| SatI | GCNGC | 3 cut(s) | 136, 156, 159 |
| ScaI | AGTACT | 1 cut(s) | 324 |
| ScrFI | CCNGG | 2 cut(s) | 212, 364 |
| SduI | GDGCHC | 2 cut(s) | 122, 180 |
| SetI | ASST | 5 cut(s) | 57, 205, 237, 255, 288 |
| SfaNI | GCATC | 1 cut(s) | 101 |
| Sfr274I | CTCGAG | 1 cut(s) | 125 |
| SlaI | CTCGAG | 1 cut(s) | 125 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 127, 237 |
| SmlI | CTYRAG | 2 cut(s) | 125, 308 |
| SmoI | CTYRAG | 2 cut(s) | 125, 308 |
| Sse9I | AATT | 2 cut(s) | 78, 99 |
| SsiI | CCGC | 3 cut(s) | 7, 19, 136 |
| SspI | AATATT | 1 cut(s) | 70 |
| StyD4I | CCNGG | 2 cut(s) | 210, 362 |
| StyI | CCWWGG | 1 cut(s) | 282 |
| TaaI | ACNGT | 1 cut(s) | 278 |
| TaiI | ACGT | 2 cut(s) | 57, 237 |
| TaqI | TCGA | 1 cut(s) | 126 |
| TasI | AATT | 2 cut(s) | 78, 99 |
| TatI | WGTACW | 2 cut(s) | 39, 322 |
| TauI | GCSGC | 1 cut(s) | 138 |
| TfiI | GAWTC | 1 cut(s) | 229 |
| Tru1I | TTAA | 5 cut(s) | 114, 270, 309, 327, 373 |
| Tru9I | TTAA | 5 cut(s) | 114, 270, 309, 327, 373 |
| TscAI | CASTG | 1 cut(s) | 21 |
| TseI | GCWGC | 2 cut(s) | 155, 158 |
| TspDTI | ATGAA | 4 cut(s) | 16, 17, 333, 363 |
| TspRI | CASTG | 1 cut(s) | 21 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 288 |
| Vha464I | CTTAAG | 1 cut(s) | 308 |
| XhoI | CTCGAG | 1 cut(s) | 125 |
| ZrmI | AGTACT | 1 cut(s) | 324 |