RchiOBHm_Chr5g0024771

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
18855986 .. 18856518
533 bp
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UTR
Exon/CDS
Intron
PRQ30449

Sequence Viewer

Length: 192 bp
ATGGATGATATCCCTCCAAGCTTTTTTCCACAAATCAAAGTGAAATTGACGAATCGAAGGTTTGAATTTCTGGTTGAGAAAGATGTTTGGATGGTTGAGACGAAGCTGCTGCCAAAATTTGGTGGCCGGAGGAGGAGGTTGCCGGTGTGTGAACAGTGCGGTGGAACAGTGATTGCGGTGCGTGAACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

7.41

Weight (kDa)

9.58

Isoelectric Point (pI)

70.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 119
AciI CCGC 2 cut(s) 159, 176
AcoI YGGCCR 1 cut(s) 124
AcsI RAATTY 2 cut(s) 65, 116
AfiI CCNNNNNNNGG 1 cut(s) 119
AgsI TTSAA 1 cut(s) 65
AluBI AGCT 2 cut(s) 21, 106
AluI AGCT 2 cut(s) 21, 106
Alw26I GTCTC 1 cut(s) 92
AoxI GGCC 1 cut(s) 124
ApeKI GCWGC 2 cut(s) 106, 109
ApoI RAATTY 2 cut(s) 65, 116
BbvI GCAGC 2 cut(s) 93, 96
BccI CCATC 1 cut(s) 85
BcgI CGANNNNNNTGC 2 cut(s) 91, 125
BcoDI GTCTC 1 cut(s) 92
BisI GCNGC 2 cut(s) 107, 110
BlsI GCNGC 2 cut(s) 108, 111
Bsc4I CCNNNNNNNGG 1 cut(s) 119
Bse118I RCCGGY 1 cut(s) 142
BseGI GGATG 2 cut(s) 10, 96
BseLI CCNNNNNNNGG 1 cut(s) 119
BseRI GAGGAG 2 cut(s) 145, 148
BseXI GCAGC 2 cut(s) 93, 96
BshFI GGCC 1 cut(s) 126
BsiSI CCGG 2 cut(s) 127, 143
BslI CCNNNNNNNGG 1 cut(s) 119
BsmAI GTCTC 1 cut(s) 92
BsmBI CGTCTC 1 cut(s) 92
BsnI GGCC 1 cut(s) 126
BspACI CCGC 2 cut(s) 159, 176
BspANI GGCC 1 cut(s) 126
BsrFI RCCGGY 1 cut(s) 142
BssAI RCCGGY 1 cut(s) 142
Bst4CI ACNGT 3 cut(s) 156, 169, 189
BstF5I GGATG 2 cut(s) 10, 96
BstMAI GTCTC 1 cut(s) 92
BstV1I GCAGC 2 cut(s) 93, 96
BsuRI GGCC 1 cut(s) 126
BtsCI GGATG 2 cut(s) 10, 96
BtsIMutI CAGTG 2 cut(s) 161, 174
Cfr10I RCCGGY 1 cut(s) 142
CviJI RGCY 3 cut(s) 21, 106, 126
CviKI_1 RGCY 3 cut(s) 21, 106, 126
EaeI YGGCCR 1 cut(s) 124
Eco32I GATATC 1 cut(s) 10
EcoRV GATATC 1 cut(s) 10
Esp3I CGTCTC 1 cut(s) 92
Fnu4HI GCNGC 2 cut(s) 107, 110
FokI GGATG 2 cut(s) 17, 103
Fsp4HI GCNGC 2 cut(s) 107, 110
GluI GCNGC 2 cut(s) 107, 110
HaeIII GGCC 1 cut(s) 126
HapII CCGG 2 cut(s) 127, 143
HindIII AAGCTT 1 cut(s) 19
HinfI GANTC 1 cut(s) 52
HpaII CCGG 2 cut(s) 127, 143
Hpy166II GTNNAC 2 cut(s) 152, 185
Hpy8I GTNNAC 2 cut(s) 152, 185
HpyAV CCTTC 1 cut(s) 51
HpyCH4III ACNGT 3 cut(s) 156, 169, 189
LpnPI CCDG 3 cut(s) 56, 140, 156
Lsp1109I GCAGC 2 cut(s) 93, 96
MluCI AATT 3 cut(s) 44, 65, 116
MnlI CCTC 4 cut(s) 24, 123, 126, 129
MspI CCGG 2 cut(s) 127, 143
PfeI GAWTC 1 cut(s) 52
PflMI CCANNNNNTGG 1 cut(s) 119
PkrI GCNGC 2 cut(s) 108, 111
SatI GCNGC 2 cut(s) 107, 110
SetI ASST 4 cut(s) 23, 62, 108, 140
SgeI CNNG 4 cut(s) 30, 83, 139, 155
Sse9I AATT 3 cut(s) 44, 65, 116
SsiI CCGC 2 cut(s) 159, 176
TaaI ACNGT 3 cut(s) 156, 169, 189
TaqI TCGA 1 cut(s) 55
TasI AATT 3 cut(s) 44, 65, 116
TfiI GAWTC 1 cut(s) 52
TscAI CASTG 2 cut(s) 161, 174
TseI GCWGC 2 cut(s) 106, 109
TspRI CASTG 2 cut(s) 161, 174
Van91I CCANNNNNTGG 1 cut(s) 119
XapI RAATTY 2 cut(s) 65, 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.