Protein ROOT HAIR DEFECTIVE 3 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0054821 RchiOBHm_Chr5g0054951 RchiOBHm_Chr5g0061411 RchiOBHm_Chr5g0082371 RchiOBHm_Chr7g0192241 |
| rosa_roxburghii | Rroxscaffold_1G00025860 Rroxscaffold_1G00026060 Rroxscaffold_1G00026160 |
| rosa_rugosa | Rorug03G0357000 Rorug03G0357100 Rorug05G0288000 |
| rosa_samantha | Rh3BG343700 Rh4CG064300 Rh5AG359300 Rh5BG366800 Rh5BG370200 Rh5BG414800 Rh5CG392700 Rh5CG439500 Rh5DG383800 Rh5DG429200 Rh5DG520300 Rh6BG403900 Rh7CG516000 Rh7DG262600 |
| rosa_wichuraiana | Rw7G042170 Rw7G042190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 2 cut(s) | 55, 184 |
| AluBI | AGCT | 2 cut(s) | 76, 110 |
| AluI | AGCT | 2 cut(s) | 76, 110 |
| Alw21I | GWGCWC | 1 cut(s) | 107 |
| Alw44I | GTGCAC | 1 cut(s) | 103 |
| AoxI | GGCC | 1 cut(s) | 6 |
| ApaLI | GTGCAC | 1 cut(s) | 103 |
| ApeKI | GCWGC | 1 cut(s) | 165 |
| AsuHPI | GGTGA | 1 cut(s) | 170 |
| BaeGI | GKGCMC | 1 cut(s) | 107 |
| Bbv12I | GWGCWC | 1 cut(s) | 107 |
| BbvI | GCAGC | 1 cut(s) | 152 |
| BccI | CCATC | 3 cut(s) | 17, 141, 149 |
| BfaI | CTAG | 1 cut(s) | 111 |
| BisI | GCNGC | 1 cut(s) | 166 |
| BlsI | GCNGC | 1 cut(s) | 167 |
| BpuEI | CTTGAG | 1 cut(s) | 22 |
| BseGI | GGATG | 2 cut(s) | 76, 152 |
| BseSI | GKGCMC | 1 cut(s) | 107 |
| BseXI | GCAGC | 1 cut(s) | 152 |
| BseYI | CCCAGC | 1 cut(s) | 168 |
| BshFI | GGCC | 1 cut(s) | 8 |
| BsiHKAI | GWGCWC | 1 cut(s) | 107 |
| BsmI | GAATGC | 1 cut(s) | 167 |
| BsnI | GGCC | 1 cut(s) | 8 |
| Bsp1286I | GDGCHC | 1 cut(s) | 107 |
| BspANI | GGCC | 1 cut(s) | 8 |
| Bst4CI | ACNGT | 2 cut(s) | 89, 191 |
| BstF5I | GGATG | 2 cut(s) | 76, 152 |
| BstSLI | GKGCMC | 1 cut(s) | 107 |
| BstV1I | GCAGC | 1 cut(s) | 152 |
| BsuRI | GGCC | 1 cut(s) | 8 |
| BtsCI | GGATG | 2 cut(s) | 76, 152 |
| BtsIMutI | CAGTG | 1 cut(s) | 94 |
| CviAII | CATG | 1 cut(s) | 118 |
| CviJI | RGCY | 4 cut(s) | 8, 76, 110, 151 |
| CviKI_1 | RGCY | 4 cut(s) | 8, 76, 110, 151 |
| FaeI | CATG | 1 cut(s) | 121 |
| FaiI | YATR | 4 cut(s) | 79, 119, 138, 194 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 135, 167 |
| FatI | CATG | 1 cut(s) | 117 |
| Fnu4HI | GCNGC | 1 cut(s) | 166 |
| FokI | GGATG | 2 cut(s) | 83, 159 |
| Fsp4HI | GCNGC | 1 cut(s) | 166 |
| FspBI | CTAG | 1 cut(s) | 111 |
| GluI | GCNGC | 1 cut(s) | 166 |
| GsaI | CCCAGC | 1 cut(s) | 172 |
| HaeIII | GGCC | 1 cut(s) | 8 |
| Hin1II | CATG | 1 cut(s) | 121 |
| HphI | GGTGA | 1 cut(s) | 170 |
| Hpy166II | GTNNAC | 1 cut(s) | 105 |
| Hpy188III | TCNNGA | 1 cut(s) | 39 |
| Hpy8I | GTNNAC | 1 cut(s) | 105 |
| HpyAV | CCTTC | 2 cut(s) | 17, 137 |
| HpyCH4III | ACNGT | 2 cut(s) | 89, 191 |
| HpyCH4V | TGCA | 2 cut(s) | 105, 201 |
| Hsp92II | CATG | 1 cut(s) | 121 |
| LpnPI | CCDG | 1 cut(s) | 154 |
| Lsp1109I | GCAGC | 1 cut(s) | 152 |
| MaeI | CTAG | 1 cut(s) | 111 |
| MaeIII | GTNAC | 1 cut(s) | 89 |
| MfeI | CAATTG | 1 cut(s) | 50 |
| MhlI | GDGCHC | 1 cut(s) | 107 |
| MluCI | AATT | 2 cut(s) | 50, 131 |
| MseI | TTAA | 1 cut(s) | 174 |
| MunI | CAATTG | 1 cut(s) | 50 |
| Mva1269I | GAATGC | 1 cut(s) | 167 |
| NlaIII | CATG | 1 cut(s) | 121 |
| NmuCI | GTSAC | 1 cut(s) | 89 |
| PctI | GAATGC | 1 cut(s) | 167 |
| PkrI | GCNGC | 1 cut(s) | 167 |
| PspFI | CCCAGC | 1 cut(s) | 168 |
| SaqAI | TTAA | 1 cut(s) | 174 |
| SatI | GCNGC | 1 cut(s) | 166 |
| SduI | GDGCHC | 1 cut(s) | 107 |
| SetI | ASST | 3 cut(s) | 28, 78, 112 |
| SgeI | CNNG | 6 cut(s) | 51, 72, 123, 130, 164, 181 |
| SmlI | CTYRAG | 1 cut(s) | 37 |
| SmoI | CTYRAG | 1 cut(s) | 37 |
| Sse9I | AATT | 2 cut(s) | 50, 131 |
| SspMI | CTAG | 1 cut(s) | 111 |
| TaaI | ACNGT | 2 cut(s) | 89, 191 |
| TasI | AATT | 2 cut(s) | 50, 131 |
| Tru1I | TTAA | 1 cut(s) | 174 |
| Tru9I | TTAA | 1 cut(s) | 174 |
| TscAI | CASTG | 1 cut(s) | 94 |
| TseFI | GTSAC | 1 cut(s) | 89 |
| TseI | GCWGC | 1 cut(s) | 165 |
| Tsp45I | GTSAC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 1 cut(s) | 36 |
| TspRI | CASTG | 1 cut(s) | 94 |
| VneI | GTGCAC | 1 cut(s) | 103 |
| XspI | CTAG | 1 cut(s) | 111 |