Protein ROOT HAIR DEFECTIVE 3 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0054821 RchiOBHm_Chr5g0054951 RchiOBHm_Chr5g0061411 RchiOBHm_Chr5g0082371 RchiOBHm_Chr7g0192241 |
| rosa_roxburghii | Rroxscaffold_1G00025860 Rroxscaffold_1G00026060 Rroxscaffold_1G00026160 |
| rosa_rugosa | Rorug03G0357000 Rorug03G0357100 Rorug05G0288000 |
| rosa_samantha | Rh3BG343700 Rh4CG064300 Rh5AG359300 Rh5BG366800 Rh5BG370200 Rh5BG414800 Rh5CG392700 Rh5CG439500 Rh5DG383800 Rh5DG429200 Rh5DG520300 Rh6BG403900 Rh7CG516000 Rh7DG262600 |
| rosa_wichuraiana | Rw7G042170 Rw7G042190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 276 |
| AclWI | GGATC | 1 cut(s) | 205 |
| AgsI | TTSAA | 3 cut(s) | 67, 214, 249 |
| AjnI | CCWGG | 1 cut(s) | 278 |
| AluBI | AGCT | 2 cut(s) | 88, 122 |
| AluI | AGCT | 2 cut(s) | 88, 122 |
| AlwI | GGATC | 1 cut(s) | 205 |
| AoxI | GGCC | 1 cut(s) | 18 |
| AspLEI | GCGC | 1 cut(s) | 117 |
| BanII | GRGCYC | 1 cut(s) | 286 |
| BccI | CCATC | 3 cut(s) | 29, 153, 290 |
| BciT130I | CCWGG | 1 cut(s) | 280 |
| BfaI | CTAG | 1 cut(s) | 126 |
| Bme1390I | CCNGG | 1 cut(s) | 280 |
| BmiI | GGNNCC | 1 cut(s) | 285 |
| BmrFI | CCNGG | 1 cut(s) | 280 |
| BmrI | ACTGGG | 1 cut(s) | 203 |
| BmsI | GCATC | 1 cut(s) | 169 |
| BmuI | ACTGGG | 1 cut(s) | 203 |
| BpuEI | CTTGAG | 1 cut(s) | 34 |
| BsaJI | CCNNGG | 1 cut(s) | 279 |
| Bse1I | ACTGG | 1 cut(s) | 198 |
| BseBI | CCWGG | 1 cut(s) | 280 |
| BseDI | CCNNGG | 1 cut(s) | 279 |
| BseGI | GGATG | 2 cut(s) | 88, 164 |
| BseNI | ACTGG | 1 cut(s) | 198 |
| BshFI | GGCC | 1 cut(s) | 20 |
| BsnI | GGCC | 1 cut(s) | 20 |
| Bsp1286I | GDGCHC | 1 cut(s) | 286 |
| Bsp143I | GATC | 2 cut(s) | 197, 206 |
| BspACI | CCGC | 1 cut(s) | 276 |
| BspANI | GGCC | 1 cut(s) | 20 |
| BspLI | GGNNCC | 1 cut(s) | 285 |
| BspPI | GGATC | 1 cut(s) | 205 |
| BsrI | ACTGG | 1 cut(s) | 198 |
| BssECI | CCNNGG | 1 cut(s) | 279 |
| BssMI | GATC | 2 cut(s) | 197, 206 |
| Bst2UI | CCWGG | 1 cut(s) | 280 |
| Bst4CI | ACNGT | 1 cut(s) | 101 |
| BstF5I | GGATG | 2 cut(s) | 88, 164 |
| BstHHI | GCGC | 1 cut(s) | 117 |
| BstKTI | GATC | 2 cut(s) | 200, 209 |
| BstMBI | GATC | 2 cut(s) | 197, 206 |
| BstNI | CCWGG | 1 cut(s) | 280 |
| BstSCI | CCNGG | 1 cut(s) | 278 |
| BstX2I | RGATCY | 1 cut(s) | 197 |
| BstYI | RGATCY | 1 cut(s) | 197 |
| BsuRI | GGCC | 1 cut(s) | 20 |
| BtsCI | GGATG | 2 cut(s) | 88, 164 |
| BtsIMutI | CAGTG | 1 cut(s) | 106 |
| CfoI | GCGC | 1 cut(s) | 117 |
| CviAII | CATG | 2 cut(s) | 13, 130 |
| CviJI | RGCY | 6 cut(s) | 20, 88, 122, 163, 284, 300 |
| CviKI_1 | RGCY | 6 cut(s) | 20, 88, 122, 163, 284, 300 |
| DpnI | GATC | 2 cut(s) | 199, 208 |
| DpnII | GATC | 2 cut(s) | 197, 206 |
| Eco24I | GRGCYC | 1 cut(s) | 286 |
| EcoRII | CCWGG | 1 cut(s) | 278 |
| EcoT22I | ATGCAT | 1 cut(s) | 184 |
| EcoT38I | GRGCYC | 1 cut(s) | 286 |
| FaeI | CATG | 2 cut(s) | 16, 133 |
| FaiI | YATR | 6 cut(s) | 9, 14, 91, 131, 150, 257 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 147, 179 |
| FatI | CATG | 2 cut(s) | 12, 129 |
| FauI | CCCGC | 1 cut(s) | 283 |
| FokI | GGATG | 2 cut(s) | 95, 171 |
| FriOI | GRGCYC | 1 cut(s) | 286 |
| FspBI | CTAG | 1 cut(s) | 126 |
| GlaI | GCGC | 1 cut(s) | 116 |
| HaeIII | GGCC | 1 cut(s) | 20 |
| HhaI | GCGC | 1 cut(s) | 117 |
| Hin1II | CATG | 2 cut(s) | 16, 133 |
| Hin6I | GCGC | 1 cut(s) | 115 |
| HinP1I | GCGC | 1 cut(s) | 115 |
| Hpy188I | TCNGA | 1 cut(s) | 202 |
| Hpy188III | TCNNGA | 1 cut(s) | 51 |
| HpyAV | CCTTC | 2 cut(s) | 29, 149 |
| HpyCH4III | ACNGT | 1 cut(s) | 101 |
| HpyCH4V | TGCA | 4 cut(s) | 182, 236, 266, 290 |
| Hsp92II | CATG | 2 cut(s) | 16, 133 |
| HspAI | GCGC | 1 cut(s) | 115 |
| Kzo9I | GATC | 2 cut(s) | 197, 206 |
| LmnI | GCTCC | 1 cut(s) | 289 |
| LpnPI | CCDG | 4 cut(s) | 179, 189, 265, 292 |
| LweI | GCATC | 1 cut(s) | 169 |
| MaeI | CTAG | 1 cut(s) | 126 |
| MaeIII | GTNAC | 1 cut(s) | 101 |
| MalI | GATC | 2 cut(s) | 199, 208 |
| MboI | GATC | 2 cut(s) | 197, 206 |
| MboII | GAAGA | 1 cut(s) | 237 |
| MfeI | CAATTG | 1 cut(s) | 62 |
| MflI | RGATCY | 1 cut(s) | 197 |
| MhlI | GDGCHC | 1 cut(s) | 286 |
| MluCI | AATT | 2 cut(s) | 62, 143 |
| MnlI | CCTC | 1 cut(s) | 10 |
| Mph1103I | ATGCAT | 1 cut(s) | 184 |
| MspR9I | CCNGG | 1 cut(s) | 280 |
| MunI | CAATTG | 1 cut(s) | 62 |
| MvaI | CCWGG | 1 cut(s) | 280 |
| NdeII | GATC | 2 cut(s) | 197, 206 |
| NlaIII | CATG | 2 cut(s) | 16, 133 |
| NlaIV | GGNNCC | 1 cut(s) | 285 |
| NmuCI | GTSAC | 1 cut(s) | 101 |
| NsiI | ATGCAT | 1 cut(s) | 184 |
| Psp6I | CCWGG | 1 cut(s) | 278 |
| PspGI | CCWGG | 1 cut(s) | 278 |
| PspN4I | GGNNCC | 1 cut(s) | 285 |
| PsuI | RGATCY | 1 cut(s) | 197 |
| Sau3AI | GATC | 2 cut(s) | 197, 206 |
| ScrFI | CCNGG | 1 cut(s) | 280 |
| SduI | GDGCHC | 1 cut(s) | 286 |
| SetI | ASST | 5 cut(s) | 40, 90, 124, 178, 229 |
| SfaNI | GCATC | 1 cut(s) | 169 |
| SmlI | CTYRAG | 1 cut(s) | 49 |
| SmoI | CTYRAG | 1 cut(s) | 49 |
| Sse9I | AATT | 2 cut(s) | 62, 143 |
| SsiI | CCGC | 1 cut(s) | 276 |
| SspMI | CTAG | 1 cut(s) | 126 |
| StyD4I | CCNGG | 1 cut(s) | 278 |
| TaaI | ACNGT | 1 cut(s) | 101 |
| TaqI | TCGA | 1 cut(s) | 271 |
| TasI | AATT | 2 cut(s) | 62, 143 |
| TscAI | CASTG | 1 cut(s) | 106 |
| TseFI | GTSAC | 1 cut(s) | 101 |
| Tsp45I | GTSAC | 1 cut(s) | 101 |
| TspDTI | ATGAA | 1 cut(s) | 48 |
| TspRI | CASTG | 1 cut(s) | 106 |
| XspI | CTAG | 1 cut(s) | 126 |
| Zsp2I | ATGCAT | 1 cut(s) | 184 |