Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0054821 RchiOBHm_Chr5g0054951 RchiOBHm_Chr5g0061411 RchiOBHm_Chr5g0082371 RchiOBHm_Chr7g0192241 |
| rosa_roxburghii | Rroxscaffold_1G00025860 Rroxscaffold_1G00026060 Rroxscaffold_1G00026160 |
| rosa_rugosa | Rorug03G0357000 Rorug03G0357100 Rorug05G0288000 |
| rosa_samantha | Rh3BG343700 Rh4CG064300 Rh5AG359300 Rh5BG366800 Rh5BG370200 Rh5BG414800 Rh5CG392700 Rh5CG439500 Rh5DG383800 Rh5DG429200 Rh5DG520300 Rh6BG403900 Rh7CG516000 Rh7DG262600 |
| rosa_wichuraiana | Rw7G042170 Rw7G042190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 199, 285 |
| AcsI | RAATTY | 1 cut(s) | 88 |
| AcuI | CTGAAG | 1 cut(s) | 120 |
| AfaI | GTAC | 1 cut(s) | 271 |
| AgsI | TTSAA | 1 cut(s) | 70 |
| ApoI | RAATTY | 1 cut(s) | 88 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 246, 278 |
| AsuHPI | GGTGA | 1 cut(s) | 52 |
| AsuII | TTCGAA | 1 cut(s) | 86 |
| BbsI | GAAGAC | 1 cut(s) | 198 |
| BccI | CCATC | 2 cut(s) | 103, 136 |
| BmiI | GGNNCC | 1 cut(s) | 215 |
| BmsI | GCATC | 1 cut(s) | 234 |
| BpiI | GAAGAC | 1 cut(s) | 198 |
| Bpu14I | TTCGAA | 1 cut(s) | 86 |
| BseGI | GGATG | 1 cut(s) | 43 |
| BseMII | CTCAG | 1 cut(s) | 158 |
| Bsh1285I | CGRYCG | 1 cut(s) | 33 |
| BsiEI | CGRYCG | 1 cut(s) | 33 |
| BslFI | GGGAC | 1 cut(s) | 225 |
| BsmFI | GGGAC | 1 cut(s) | 225 |
| Bsp119I | TTCGAA | 1 cut(s) | 86 |
| Bsp143I | GATC | 2 cut(s) | 30, 101 |
| BspACI | CCGC | 2 cut(s) | 199, 285 |
| BspCNI | CTCAG | 1 cut(s) | 159 |
| BspLI | GGNNCC | 1 cut(s) | 215 |
| BspT104I | TTCGAA | 1 cut(s) | 86 |
| BssMI | GATC | 2 cut(s) | 30, 101 |
| Bst4CI | ACNGT | 1 cut(s) | 109 |
| Bst6I | CTCTTC | 2 cut(s) | 240, 249 |
| BstBI | TTCGAA | 1 cut(s) | 86 |
| BstDEI | CTNAG | 2 cut(s) | 167, 338 |
| BstF5I | GGATG | 1 cut(s) | 43 |
| BstKTI | GATC | 2 cut(s) | 33, 104 |
| BstMBI | GATC | 2 cut(s) | 30, 101 |
| BstMCI | CGRYCG | 1 cut(s) | 33 |
| BstV2I | GAAGAC | 1 cut(s) | 198 |
| BtgZI | GCGATG | 1 cut(s) | 211 |
| BtsCI | GGATG | 1 cut(s) | 43 |
| BtsIMutI | CAGTG | 1 cut(s) | 114 |
| CseI | GACGC | 1 cut(s) | 294 |
| Csp6I | GTAC | 1 cut(s) | 270 |
| CviJI | RGCY | 3 cut(s) | 50, 141, 165 |
| CviKI_1 | RGCY | 3 cut(s) | 50, 141, 165 |
| CviQI | GTAC | 1 cut(s) | 270 |
| DdeI | CTNAG | 2 cut(s) | 167, 338 |
| DpnI | GATC | 2 cut(s) | 32, 103 |
| DpnII | GATC | 2 cut(s) | 30, 101 |
| Eam1104I | CTCTTC | 2 cut(s) | 240, 249 |
| EarI | CTCTTC | 2 cut(s) | 240, 249 |
| Eco57I | CTGAAG | 1 cut(s) | 120 |
| FaiI | YATR | 4 cut(s) | 20, 318, 320, 333 |
| FaqI | GGGAC | 1 cut(s) | 225 |
| FauI | CCCGC | 1 cut(s) | 292 |
| FauNDI | CATATG | 1 cut(s) | 318 |
| FokI | GGATG | 1 cut(s) | 50 |
| HgaI | GACGC | 1 cut(s) | 294 |
| HphI | GGTGA | 1 cut(s) | 52 |
| Hpy166II | GTNNAC | 1 cut(s) | 325 |
| Hpy188I | TCNGA | 1 cut(s) | 213 |
| Hpy188III | TCNNGA | 2 cut(s) | 44, 99 |
| Hpy8I | GTNNAC | 1 cut(s) | 325 |
| HpyAV | CCTTC | 1 cut(s) | 144 |
| HpyCH4III | ACNGT | 1 cut(s) | 109 |
| HpyF3I | CTNAG | 2 cut(s) | 167, 338 |
| Kzo9I | GATC | 2 cut(s) | 30, 101 |
| LmnI | GCTCC | 1 cut(s) | 153 |
| LpnPI | CCDG | 2 cut(s) | 123, 179 |
| LweI | GCATC | 1 cut(s) | 234 |
| MalI | GATC | 2 cut(s) | 32, 103 |
| MboI | GATC | 2 cut(s) | 30, 101 |
| MboII | GAAGA | 6 cut(s) | 69, 191, 203, 227, 266, 305 |
| MfeI | CAATTG | 1 cut(s) | 120 |
| MluCI | AATT | 3 cut(s) | 88, 120, 309 |
| MmeI | TCCRAC | 2 cut(s) | 156, 299 |
| MnlI | CCTC | 8 cut(s) | 28, 61, 164, 167, 212, 253, 299, 347 |
| MseI | TTAA | 1 cut(s) | 346 |
| MunI | CAATTG | 1 cut(s) | 120 |
| NdeI | CATATG | 1 cut(s) | 318 |
| NdeII | GATC | 2 cut(s) | 30, 101 |
| NlaIV | GGNNCC | 1 cut(s) | 215 |
| NspV | TTCGAA | 1 cut(s) | 86 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 258 |
| Ple19I | CGATCG | 1 cut(s) | 33 |
| PspN4I | GGNNCC | 1 cut(s) | 215 |
| PvuI | CGATCG | 1 cut(s) | 33 |
| RsaI | GTAC | 1 cut(s) | 271 |
| RsaNI | GTAC | 1 cut(s) | 270 |
| SaqAI | TTAA | 1 cut(s) | 346 |
| Sau3AI | GATC | 2 cut(s) | 30, 101 |
| SetI | ASST | 2 cut(s) | 271, 339 |
| SfaNI | GCATC | 1 cut(s) | 234 |
| SfuI | TTCGAA | 1 cut(s) | 86 |
| SgeI | CNNG | 9 cut(s) | 46, 56, 111, 150, 157, 178, 222, 263, 296 |
| Sse9I | AATT | 3 cut(s) | 88, 120, 309 |
| SsiI | CCGC | 2 cut(s) | 199, 285 |
| TaaI | ACNGT | 1 cut(s) | 109 |
| TaqI | TCGA | 5 cut(s) | 33, 43, 86, 104, 252 |
| TasI | AATT | 3 cut(s) | 88, 120, 309 |
| Tru1I | TTAA | 1 cut(s) | 346 |
| Tru9I | TTAA | 1 cut(s) | 346 |
| TscAI | CASTG | 1 cut(s) | 114 |
| TspDTI | ATGAA | 2 cut(s) | 128, 305 |
| TspRI | CASTG | 1 cut(s) | 114 |
| XapI | RAATTY | 1 cut(s) | 88 |