Protein ROOT HAIR DEFECTIVE 3 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0054821 RchiOBHm_Chr5g0054951 RchiOBHm_Chr5g0061411 RchiOBHm_Chr5g0082371 RchiOBHm_Chr7g0192241 |
| rosa_roxburghii | Rroxscaffold_1G00025860 Rroxscaffold_1G00026060 Rroxscaffold_1G00026160 |
| rosa_rugosa | Rorug03G0357000 Rorug03G0357100 Rorug05G0288000 |
| rosa_samantha | Rh3BG343700 Rh4CG064300 Rh5AG359300 Rh5BG366800 Rh5BG370200 Rh5BG414800 Rh5CG392700 Rh5CG439500 Rh5DG383800 Rh5DG429200 Rh5DG520300 Rh6BG403900 Rh7CG516000 Rh7DG262600 |
| rosa_wichuraiana | Rw7G042170 Rw7G042190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 211 |
| AcsI | RAATTY | 1 cut(s) | 185 |
| AcuI | CTGAAG | 2 cut(s) | 203, 211 |
| AgsI | TTSAA | 1 cut(s) | 175 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 228 |
| AluBI | AGCT | 4 cut(s) | 73, 107, 194, 217 |
| AluI | AGCT | 4 cut(s) | 73, 107, 194, 217 |
| AoxI | GGCC | 2 cut(s) | 18, 211 |
| ApeKI | GCWGC | 1 cut(s) | 162 |
| ApoI | RAATTY | 1 cut(s) | 185 |
| AspLEI | GCGC | 1 cut(s) | 102 |
| AsuHPI | GGTGA | 1 cut(s) | 167 |
| BalI | TGGCCA | 1 cut(s) | 213 |
| BbvI | GCAGC | 1 cut(s) | 149 |
| BccI | CCATC | 2 cut(s) | 29, 138 |
| BfaI | CTAG | 3 cut(s) | 111, 200, 250 |
| BisI | GCNGC | 1 cut(s) | 163 |
| BlsI | GCNGC | 1 cut(s) | 164 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 228 |
| BpuEI | CTTGAG | 1 cut(s) | 34 |
| Bse1I | ACTGG | 1 cut(s) | 214 |
| BseGI | GGATG | 2 cut(s) | 73, 149 |
| BseNI | ACTGG | 1 cut(s) | 214 |
| BseXI | GCAGC | 1 cut(s) | 149 |
| BshFI | GGCC | 2 cut(s) | 20, 213 |
| BsmI | GAATGC | 1 cut(s) | 164 |
| BsnI | GGCC | 2 cut(s) | 20, 213 |
| BspANI | GGCC | 2 cut(s) | 20, 213 |
| BsrI | ACTGG | 1 cut(s) | 214 |
| Bst4CI | ACNGT | 1 cut(s) | 86 |
| BstC8I | GCNNGC | 1 cut(s) | 215 |
| BstF5I | GGATG | 2 cut(s) | 73, 149 |
| BstHHI | GCGC | 1 cut(s) | 102 |
| BstV1I | GCAGC | 1 cut(s) | 149 |
| BsuRI | GGCC | 2 cut(s) | 20, 213 |
| BtsCI | GGATG | 2 cut(s) | 73, 149 |
| BtsIMutI | CAGTG | 2 cut(s) | 91, 207 |
| Cac8I | GCNNGC | 1 cut(s) | 215 |
| CfoI | GCGC | 1 cut(s) | 102 |
| CviAII | CATG | 2 cut(s) | 13, 115 |
| CviJI | RGCY | 7 cut(s) | 20, 73, 107, 148, 194, 213, 217 |
| CviKI_1 | RGCY | 7 cut(s) | 20, 73, 107, 148, 194, 213, 217 |
| DriI | GACNNNNNGTC | 1 cut(s) | 228 |
| EaeI | YGGCCR | 1 cut(s) | 211 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 228 |
| Eco57I | CTGAAG | 2 cut(s) | 203, 211 |
| FaeI | CATG | 2 cut(s) | 16, 118 |
| FaiI | YATR | 7 cut(s) | 9, 14, 76, 116, 135, 153, 191 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 132, 164 |
| FatI | CATG | 2 cut(s) | 12, 114 |
| Fnu4HI | GCNGC | 1 cut(s) | 163 |
| FokI | GGATG | 2 cut(s) | 80, 156 |
| Fsp4HI | GCNGC | 1 cut(s) | 163 |
| FspBI | CTAG | 3 cut(s) | 111, 200, 250 |
| GlaI | GCGC | 1 cut(s) | 101 |
| GluI | GCNGC | 1 cut(s) | 163 |
| HaeIII | GGCC | 2 cut(s) | 20, 213 |
| HhaI | GCGC | 1 cut(s) | 102 |
| Hin1II | CATG | 2 cut(s) | 16, 118 |
| Hin6I | GCGC | 1 cut(s) | 100 |
| HinP1I | GCGC | 1 cut(s) | 100 |
| HphI | GGTGA | 1 cut(s) | 167 |
| Hpy188I | TCNGA | 1 cut(s) | 222 |
| Hpy188III | TCNNGA | 1 cut(s) | 51 |
| HpyAV | CCTTC | 3 cut(s) | 29, 134, 235 |
| HpyCH4III | ACNGT | 1 cut(s) | 86 |
| HpyCH4V | TGCA | 1 cut(s) | 239 |
| Hsp92II | CATG | 2 cut(s) | 16, 118 |
| HspAI | GCGC | 1 cut(s) | 100 |
| LpnPI | CCDG | 3 cut(s) | 151, 195, 227 |
| Lsp1109I | GCAGC | 1 cut(s) | 149 |
| MaeI | CTAG | 3 cut(s) | 111, 200, 250 |
| MaeIII | GTNAC | 2 cut(s) | 86, 202 |
| MfeI | CAATTG | 1 cut(s) | 62 |
| MlsI | TGGCCA | 1 cut(s) | 213 |
| MluCI | AATT | 3 cut(s) | 62, 128, 185 |
| MluNI | TGGCCA | 1 cut(s) | 213 |
| MnlI | CCTC | 1 cut(s) | 10 |
| Mox20I | TGGCCA | 1 cut(s) | 213 |
| MscI | TGGCCA | 1 cut(s) | 213 |
| Msp20I | TGGCCA | 1 cut(s) | 213 |
| MunI | CAATTG | 1 cut(s) | 62 |
| Mva1269I | GAATGC | 1 cut(s) | 164 |
| NlaIII | CATG | 2 cut(s) | 16, 118 |
| NmuCI | GTSAC | 2 cut(s) | 86, 202 |
| PctI | GAATGC | 1 cut(s) | 164 |
| PkrI | GCNGC | 1 cut(s) | 164 |
| SatI | GCNGC | 1 cut(s) | 163 |
| SetI | ASST | 6 cut(s) | 40, 75, 109, 196, 219, 227 |
| SgeI | CNNG | 8 cut(s) | 25, 63, 123, 127, 178, 212, 222, 226 |
| SmlI | CTYRAG | 1 cut(s) | 49 |
| SmoI | CTYRAG | 1 cut(s) | 49 |
| Sse9I | AATT | 3 cut(s) | 62, 128, 185 |
| SspMI | CTAG | 3 cut(s) | 111, 200, 250 |
| TaaI | ACNGT | 1 cut(s) | 86 |
| TasI | AATT | 3 cut(s) | 62, 128, 185 |
| TscAI | CASTG | 2 cut(s) | 91, 214 |
| TseFI | GTSAC | 2 cut(s) | 86, 202 |
| TseI | GCWGC | 1 cut(s) | 162 |
| Tsp45I | GTSAC | 2 cut(s) | 86, 202 |
| TspDTI | ATGAA | 1 cut(s) | 48 |
| TspRI | CASTG | 2 cut(s) | 91, 214 |
| XapI | RAATTY | 1 cut(s) | 185 |
| XspI | CTAG | 3 cut(s) | 111, 200, 250 |