Cytochrome c oxidase assembly protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G66590 AT1G66590 AT1G69750 AT1G69750 AT1G69750 AT1G69750 AT1G69750 |
| malus_domestica | MD09G1206900.v1.1 MD17G1187600.v1.1 |
| prunus_persica | Prupe.3G063000_v2.0.a1 Prupe.3G063000_v2.0.a1 Prupe.3G063000_v2.0.a1 |
| pyrus_communis | pycom09g12330 |
| rosa_chinensis | RchiOBHm_Chr2g0139621 RchiOBHm_Chr4g0404221 RchiOBHm_Chr5g0082321 RchiOBHm_Chr5g0082611 |
| rosa_laevigata | RLG00000000932 |
| rosa_roxburghii | Rroxscaffold_1G00070570 Rroxscaffold_2G00105340 Rroxscaffold_4G00307960 |
| rosa_samantha | Rh1BG316700 Rh2DG428300 Rh4AG244800 Rh4CG032600 Rh5AG293100 |
| rosa_wichuraiana | Rw2G033500 Rw6G004180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 23 |
| AccI | GTMKAC | 1 cut(s) | 166 |
| AciI | CCGC | 1 cut(s) | 196 |
| AclWI | GGATC | 1 cut(s) | 93 |
| AcuI | CTGAAG | 2 cut(s) | 45, 209 |
| AfaI | GTAC | 1 cut(s) | 185 |
| AjnI | CCWGG | 1 cut(s) | 105 |
| AlwI | GGATC | 1 cut(s) | 93 |
| AoxI | GGCC | 1 cut(s) | 145 |
| AspS9I | GGNCC | 1 cut(s) | 145 |
| BanI | GGYRCC | 1 cut(s) | 23 |
| BbsI | GAAGAC | 1 cut(s) | 67 |
| BccI | CCATC | 1 cut(s) | 193 |
| BciT130I | CCWGG | 1 cut(s) | 107 |
| Bme1390I | CCNGG | 1 cut(s) | 107 |
| BmgT120I | GGNCC | 1 cut(s) | 145 |
| BmiI | GGNNCC | 1 cut(s) | 25 |
| BmrFI | CCNGG | 1 cut(s) | 107 |
| BpiI | GAAGAC | 1 cut(s) | 67 |
| BseBI | CCWGG | 1 cut(s) | 107 |
| BseGI | GGATG | 1 cut(s) | 204 |
| BshFI | GGCC | 1 cut(s) | 147 |
| BshNI | GGYRCC | 1 cut(s) | 23 |
| BsnI | GGCC | 1 cut(s) | 147 |
| Bsp143I | GATC | 1 cut(s) | 85 |
| BspACI | CCGC | 1 cut(s) | 196 |
| BspANI | GGCC | 1 cut(s) | 147 |
| BspLI | GGNNCC | 1 cut(s) | 25 |
| BspPI | GGATC | 1 cut(s) | 93 |
| BspT107I | GGYRCC | 1 cut(s) | 23 |
| BssMI | GATC | 1 cut(s) | 85 |
| Bst2UI | CCWGG | 1 cut(s) | 107 |
| BstF5I | GGATG | 1 cut(s) | 204 |
| BstKTI | GATC | 1 cut(s) | 88 |
| BstMBI | GATC | 1 cut(s) | 85 |
| BstNI | CCWGG | 1 cut(s) | 107 |
| BstSCI | CCNGG | 1 cut(s) | 105 |
| BstV2I | GAAGAC | 1 cut(s) | 67 |
| BsuRI | GGCC | 1 cut(s) | 147 |
| BtsCI | GGATG | 1 cut(s) | 204 |
| Cfr13I | GGNCC | 1 cut(s) | 145 |
| Csp6I | GTAC | 1 cut(s) | 184 |
| CviJI | RGCY | 1 cut(s) | 147 |
| CviKI_1 | RGCY | 1 cut(s) | 147 |
| CviQI | GTAC | 1 cut(s) | 184 |
| DpnI | GATC | 1 cut(s) | 87 |
| DpnII | GATC | 1 cut(s) | 85 |
| Eco57I | CTGAAG | 2 cut(s) | 45, 209 |
| EcoRII | CCWGG | 1 cut(s) | 105 |
| EcoT22I | ATGCAT | 1 cut(s) | 96 |
| FaiI | YATR | 2 cut(s) | 90, 92 |
| FauNDI | CATATG | 1 cut(s) | 90 |
| FblI | GTMKAC | 1 cut(s) | 166 |
| HaeIII | GGCC | 1 cut(s) | 147 |
| HinfI | GANTC | 1 cut(s) | 45 |
| Hpy166II | GTNNAC | 1 cut(s) | 167 |
| Hpy188I | TCNGA | 3 cut(s) | 64, 135, 157 |
| Hpy8I | GTNNAC | 1 cut(s) | 167 |
| HpyAV | CCTTC | 2 cut(s) | 69, 107 |
| HpyCH4V | TGCA | 1 cut(s) | 94 |
| Kzo9I | GATC | 1 cut(s) | 85 |
| LpnPI | CCDG | 3 cut(s) | 92, 119, 200 |
| MaeIII | GTNAC | 1 cut(s) | 101 |
| MalI | GATC | 1 cut(s) | 87 |
| MboI | GATC | 1 cut(s) | 85 |
| MboII | GAAGA | 1 cut(s) | 67 |
| MfeI | CAATTG | 1 cut(s) | 127 |
| MluCI | AATT | 3 cut(s) | 54, 127, 179 |
| MlyI | GAGTC | 1 cut(s) | 54 |
| Mph1103I | ATGCAT | 1 cut(s) | 96 |
| MslI | CAYNNNNRTG | 1 cut(s) | 99 |
| MspR9I | CCNGG | 1 cut(s) | 107 |
| MunI | CAATTG | 1 cut(s) | 127 |
| MvaI | CCWGG | 1 cut(s) | 107 |
| NdeI | CATATG | 1 cut(s) | 90 |
| NdeII | GATC | 1 cut(s) | 85 |
| NlaIV | GGNNCC | 1 cut(s) | 25 |
| NmuCI | GTSAC | 1 cut(s) | 101 |
| NsiI | ATGCAT | 1 cut(s) | 96 |
| PleI | GAGTC | 1 cut(s) | 53 |
| PpsI | GAGTC | 1 cut(s) | 53 |
| Psp6I | CCWGG | 1 cut(s) | 105 |
| PspGI | CCWGG | 1 cut(s) | 105 |
| PspN4I | GGNNCC | 1 cut(s) | 25 |
| PspPI | GGNCC | 1 cut(s) | 145 |
| RsaI | GTAC | 1 cut(s) | 185 |
| RsaNI | GTAC | 1 cut(s) | 184 |
| RseI | CAYNNNNRTG | 1 cut(s) | 99 |
| Sau3AI | GATC | 1 cut(s) | 85 |
| Sau96I | GGNCC | 1 cut(s) | 145 |
| SchI | GAGTC | 1 cut(s) | 54 |
| ScrFI | CCNGG | 1 cut(s) | 107 |
| SetI | ASST | 3 cut(s) | 22, 73, 189 |
| SgeI | CNNG | 5 cut(s) | 26, 118, 119, 156, 199 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 99 |
| Sse9I | AATT | 3 cut(s) | 54, 127, 179 |
| SsiI | CCGC | 1 cut(s) | 196 |
| StyD4I | CCNGG | 1 cut(s) | 105 |
| TasI | AATT | 3 cut(s) | 54, 127, 179 |
| TseFI | GTSAC | 1 cut(s) | 101 |
| Tsp45I | GTSAC | 1 cut(s) | 101 |
| XmiI | GTMKAC | 1 cut(s) | 166 |
| Zsp2I | ATGCAT | 1 cut(s) | 96 |