RchiOBHm_Chr6g0256641

O-acyltransferase (WSD1-like)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
11872883 .. 11875500
2618 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23024

Sequence Viewer

Length: 1422 bp
ATGGGTTCGTCGTCGGCGGCGGCGGCAACAACCGACTCCGACGAGCCCGTGACTCCGGCCGGCCGTCTCTTCCTGCAGCCCCAAATGAACCAAATAATCTACTGCGTGATGGGCTTCAAAAACCCAATCGACATCGACTCCATCAAATCCCAGGTCAGGTCCTCCCTCATGCTCACCCACCCAAGATTCTCCAGCCTCATGGTGCGTGACTCCCACGGCCGAGAACGCTGGCACAAAACCACCCACATCGACCTCGACCGCCACGTCATCGTCCTCCACGACCCCGTCTCCTCCTCCTCCTCTTCCGACGACGAGACCGCCGTCAACGACTACCTGGCCGACCTCTCCACCGGCTCGGGGCTCCCCACCGACAAACCCATGTGGGAGTTTCATCTCCTGATTGCTCACAAAGTTGGGATATTCCGAATCCACCATGCTTTGGGAGATGGGATATCGCTTATGTCCATGTTCTTGGCGAGTTGCCGGAGAGCCGACGACCAGGAGAAGTTGCCGACTTTGGCGTCGGGAAAGAGTACTAAAGGTGTGAATGAGAGGAAGGGTCTGTGGGTTTTGCTGTGCGGGTTTGTGGCAATGGTGTGGTTTAGCATGGTGTTTGTGGTGGCGTTTCTGTTGAGGTGTTTGTGGGTTTGTGATCGGAAAACTGAGATCAGTGGCGGTGATGGGGTTGAGCTCTGGCCTAGGAAATTAGCTACTGCAAAGTTTACGCTTCAAGATATGAAGCTTGTGAAGAAAGCTGTTCCTAATGCGACCATCAATGATGTACTTTTTGGGGTGATTTCATCAGGGATATCAAGATACTTGGACCACAGAAAACCAAATGCTTTGCCTGAGGGTGTTCAAATTACAGGGGTAGCTATGACTAATCTAAGAGAGCTACCTGGATTGCAGGAACTATCCGATTTGATGAGAAGCAATTCAAGATCAAGTTGGGGCAACAAGTTCGGCATGCTTCTCCTACCTATATATTACCATAACTCTAAGAGCAATGGCGACCCTCTAGCCTATCTCAAGAGATCAAAGGTGATGATTGACAAGAAGAAGCAATCTGTAGAGGGTCATTTCTCATACAAAATTGGGTTGTTTGTGATGACCTACTTTGGACCAAAGGTTGCTACCTGGCTGAATTACCGGATTCTCTGCAATACTAGCTTTACCATCTCAAATATACTCGGTCCGCAAGAAGAAATTACAGTTGGAGGCAACCCTATAACTTACCTAAGAGCCAGTTCATCAAGTTTGCCCCATGCACTCACAATGCACATGGTGAGCTATGCTGAAAGGGCAGACATGCAAATATTGGTGGCTAAAGATATCATCCCTGACCCAGCATTTCTCGCTAAGTGCTTCGAAGAGGCCTTACTTGATATGAAGGAAGCAGCTGCAGCCATCACAGAAACCTAG

Protein Analysis

473

Amino Acids

52.51

Weight (kDa)

8.53

Isoelectric Point (pI)

43.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WS_DGAT_cat PF03007 71 - 176 4.4e-06 Wax ester synthase/diacylglycerol acyltransferase catalytic domain
WS_DGAT_C PF06974 317 - 464 2.7e-42 WS/DGAT C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 263, 520
AccB7I CCANNNNNTGG 1 cut(s) 439
AciI CCGC 8 cut(s) 17, 20, 23, 259, 318, 579, 675, 1196
AcoI YGGCCR 4 cut(s) 57, 61, 217, 336
AcyI GRCGYC 1 cut(s) 521
AdeI CACNNNGTG 1 cut(s) 1285
AfaI GTAC 2 cut(s) 535, 783
AfiI CCNNNNNNNGG 3 cut(s) 156, 357, 439
AgsI TTSAA 4 cut(s) 118, 731, 860, 939
AjiI CACGTC 1 cut(s) 265
AjnI CCWGG 5 cut(s) 150, 333, 498, 898, 1136
AjuI GAANNNNNNNTTGG 2 cut(s) 1197, 1229
AluBI AGCT 9 cut(s) 691, 710, 742, 755, 875, 895, 1170, 1290, 1400
AluI AGCT 9 cut(s) 691, 710, 742, 755, 875, 895, 1170, 1290, 1400
Alw21I GWGCWC 1 cut(s) 693
Alw26I GTCTC 3 cut(s) 71, 292, 308
Ama87I CYCGRG 1 cut(s) 355
AoxI GGCC 6 cut(s) 57, 61, 217, 336, 695, 1374
ApeKI GCWGC 4 cut(s) 76, 1397, 1400, 1403
ArsI GACNNNNNNTTYG 2 cut(s) 138, 170
Asp700I GAANNNNTTC 1 cut(s) 934
AspA2I CCTAGG 1 cut(s) 698
AspS9I GGNCC 4 cut(s) 159, 823, 1121, 1193
AsuHPI GGTGA 5 cut(s) 166, 689, 805, 1054, 1297
AsuII TTCGAA 1 cut(s) 1368
AvaI CYCGRG 1 cut(s) 355
AvaII GGWCC 4 cut(s) 159, 823, 1121, 1193
AvrII CCTAGG 1 cut(s) 698
AxyI CCTNAGG 1 cut(s) 849
BanII GRGCYC 3 cut(s) 48, 363, 693
BarI GAAGNNNNNNTAC 2 cut(s) 1362, 1394
Bbv12I GWGCWC 1 cut(s) 693
BbvI GCAGC 4 cut(s) 88, 1387, 1409, 1415
BccI CCATC 7 cut(s) 103, 149, 440, 674, 779, 1184, 1415
BceAI ACGGC 3 cut(s) 48, 232, 305
BcgI CGANNNNNNTGC 2 cut(s) 943, 977
BciT130I CCWGG 5 cut(s) 152, 335, 500, 900, 1138
BcoDI GTCTC 3 cut(s) 71, 292, 308
BfaI CTAG 4 cut(s) 699, 1019, 1167, 1420
BfmI CTRYAG 3 cut(s) 74, 1068, 1401
BisI GCNGC 7 cut(s) 18, 21, 24, 77, 1398, 1401, 1404
BlnI CCTAGG 1 cut(s) 698
BlsI GCNGC 7 cut(s) 19, 22, 25, 78, 1399, 1402, 1405
BmcAI AGTACT 1 cut(s) 535
Bme1390I CCNGG 5 cut(s) 152, 335, 500, 900, 1138
Bme18I GGWCC 4 cut(s) 159, 823, 1121, 1193
BmeT110I CYCGRG 1 cut(s) 355
BmgBI CACGTC 1 cut(s) 265
BmgT120I GGNCC 4 cut(s) 159, 823, 1121, 1193
BmiI GGNNCC 1 cut(s) 362
BmrFI CCNGG 5 cut(s) 152, 335, 500, 900, 1138
BoxI GACNNNNGTC 1 cut(s) 320
BpmI CTGGAG 1 cut(s) 175
Bpu14I TTCGAA 1 cut(s) 1368
BpuEI CTTGAG 1 cut(s) 1013
BsaHI GRCGYC 1 cut(s) 521
BsaI GGTCTC 1 cut(s) 308
BsaJI CCNNGG 3 cut(s) 150, 214, 698
BsaWI WCCGGW 1 cut(s) 1149
BsaXI ACNNNNNCTCC 4 cut(s) 122, 152, 272, 302
Bsc4I CCNNNNNNNGG 3 cut(s) 156, 357, 439
Bse118I RCCGGY 2 cut(s) 59, 350
Bse1I ACTGG 1 cut(s) 1245
Bse21I CCTNAGG 1 cut(s) 849
Bse3DI GCAATG 2 cut(s) 597, 1012
BseBI CCWGG 5 cut(s) 152, 335, 500, 900, 1138
BseDI CCNNGG 3 cut(s) 150, 214, 698
BseGI GGATG 1 cut(s) 1335
BseLI CCNNNNNNNGG 3 cut(s) 156, 357, 439
BseMI GCAATG 2 cut(s) 597, 1012
BseMII CTCAG 2 cut(s) 654, 840
BseNI ACTGG 1 cut(s) 1245
BseRI GAGGAG 4 cut(s) 280, 283, 286, 289
BseX3I CGGCCG 3 cut(s) 57, 61, 217
BseXI GCAGC 4 cut(s) 88, 1387, 1409, 1415
BseYI CCCAGC 1 cut(s) 1345
Bsh1285I CGRYCG 4 cut(s) 60, 64, 220, 259
BshFI GGCC 6 cut(s) 59, 63, 219, 338, 697, 1376
BsiEI CGRYCG 4 cut(s) 60, 64, 220, 259
BsiHKAI GWGCWC 1 cut(s) 693
BsiHKCI CYCGRG 1 cut(s) 355
BsiSI CCGG 5 cut(s) 56, 60, 351, 484, 1150
BslI CCNNNNNNNGG 3 cut(s) 156, 357, 439
BsmAI GTCTC 3 cut(s) 71, 292, 308
BsmBI CGTCTC 2 cut(s) 71, 292
BsnI GGCC 6 cut(s) 59, 63, 219, 338, 697, 1376
Bso31I GGTCTC 1 cut(s) 308
BsoBI CYCGRG 1 cut(s) 355
Bsp119I TTCGAA 1 cut(s) 1368
Bsp1286I GDGCHC 3 cut(s) 48, 363, 693
Bsp143I GATC 4 cut(s) 652, 666, 941, 1034
BspACI CCGC 8 cut(s) 17, 20, 23, 259, 318, 579, 675, 1196
BspANI GGCC 6 cut(s) 59, 63, 219, 338, 697, 1376
BspCNI CTCAG 2 cut(s) 655, 841
BspLI GGNNCC 1 cut(s) 362
BspMAI CTGCAG 2 cut(s) 78, 1405
BspT104I TTCGAA 1 cut(s) 1368
BspTNI GGTCTC 1 cut(s) 308
BsrDI GCAATG 2 cut(s) 597, 1012
BsrFI RCCGGY 2 cut(s) 59, 350
BsrI ACTGG 1 cut(s) 1245
BssAI RCCGGY 2 cut(s) 59, 350
BssECI CCNNGG 3 cut(s) 150, 214, 698
BssMI GATC 4 cut(s) 652, 666, 941, 1034
BssNI GRCGYC 1 cut(s) 521
BssT1I CCWWGG 1 cut(s) 698
Bst2UI CCWGG 5 cut(s) 152, 335, 500, 900, 1138
Bst4CI ACNGT 1 cut(s) 1213
Bst6I CTCTTC 3 cut(s) 74, 307, 1365
BstACI GRCGYC 1 cut(s) 521
BstBI TTCGAA 1 cut(s) 1368
BstC8I GCNNGC 3 cut(s) 61, 230, 968
BstDEI CTNAG 6 cut(s) 663, 849, 887, 999, 1238, 1359
BstDSI CCRYGG 1 cut(s) 214
BstF5I GGATG 1 cut(s) 1335
BstKTI GATC 4 cut(s) 655, 669, 944, 1037
BstMAI GTCTC 3 cut(s) 71, 292, 308
BstMBI GATC 4 cut(s) 652, 666, 941, 1034
BstMCI CGRYCG 4 cut(s) 60, 64, 220, 259
BstMWI GCNNNNNNNGC 7 cut(s) 23, 111, 225, 1167, 1301, 1355, 1403
BstNI CCWGG 5 cut(s) 152, 335, 500, 900, 1138
BstNSI RCATGY 2 cut(s) 970, 1312
BstPAI GACNNNNGTC 1 cut(s) 320
BstSCI CCNGG 5 cut(s) 150, 333, 498, 898, 1136
BstSFI CTRYAG 3 cut(s) 74, 1068, 1401
BstV1I GCAGC 4 cut(s) 88, 1387, 1409, 1415
BstXI CCANNNNNNTGG 2 cut(s) 199, 472
BstZI CGGCCG 3 cut(s) 57, 61, 217
Bsu36I CCTNAGG 1 cut(s) 849
BsuRI GGCC 6 cut(s) 59, 63, 219, 338, 697, 1376
BtgI CCRYGG 1 cut(s) 214
BtrI CACGTC 1 cut(s) 265
BtsCI GGATG 1 cut(s) 1335
BtsIMutI CAGTG 1 cut(s) 676
Cac8I GCNNGC 3 cut(s) 61, 230, 968
Cfr10I RCCGGY 2 cut(s) 59, 350
Cfr13I GGNCC 4 cut(s) 159, 823, 1121, 1193
CpoI CGGWCCG 1 cut(s) 1193
CseI GACGC 1 cut(s) 510
Csp6I GTAC 2 cut(s) 534, 782
CspI CGGWCCG 1 cut(s) 1193
CviQI GTAC 2 cut(s) 534, 782
DdeI CTNAG 6 cut(s) 663, 849, 887, 999, 1238, 1359
DpnI GATC 4 cut(s) 654, 668, 943, 1036
DpnII GATC 4 cut(s) 652, 666, 941, 1034
DraIII CACNNNGTG 1 cut(s) 1285
DrdI GACNNNNNNGTC 2 cut(s) 263, 520
DseDI GACNNNNNNGTC 2 cut(s) 263, 520
EaeI YGGCCR 4 cut(s) 57, 61, 217, 336
EagI CGGCCG 3 cut(s) 57, 61, 217
Eam1104I CTCTTC 3 cut(s) 74, 307, 1365
EarI CTCTTC 3 cut(s) 74, 307, 1365
Ecl136II GAGCTC 1 cut(s) 691
EclXI CGGCCG 3 cut(s) 57, 61, 217
Eco130I CCWWGG 1 cut(s) 698
Eco147I AGGCCT 1 cut(s) 1376
Eco24I GRGCYC 3 cut(s) 48, 363, 693
Eco31I GGTCTC 1 cut(s) 308
Eco32I GATATC 3 cut(s) 453, 810, 1333
Eco47I GGWCC 4 cut(s) 159, 823, 1121, 1193
Eco52I CGGCCG 3 cut(s) 57, 61, 217
Eco53kI GAGCTC 1 cut(s) 691
Eco81I CCTNAGG 1 cut(s) 849
Eco88I CYCGRG 1 cut(s) 355
EcoICRI GAGCTC 1 cut(s) 691
EcoO109I RGGNCCY 1 cut(s) 159
EcoRII CCWGG 5 cut(s) 150, 333, 498, 898, 1136
EcoRV GATATC 3 cut(s) 453, 810, 1333
EcoT14I CCWWGG 1 cut(s) 698
EcoT38I GRGCYC 3 cut(s) 48, 363, 693
ErhI CCWWGG 1 cut(s) 698
Esp3I CGTCTC 2 cut(s) 71, 292
FauI CCCGC 1 cut(s) 572
Fnu4HI GCNGC 7 cut(s) 18, 21, 24, 77, 1398, 1401, 1404
FokI GGATG 1 cut(s) 1322
FriOI GRGCYC 3 cut(s) 48, 363, 693
FseI GGCCGGCC 1 cut(s) 63
Fsp4HI GCNGC 7 cut(s) 18, 21, 24, 77, 1398, 1401, 1404
FspBI CTAG 4 cut(s) 699, 1019, 1167, 1420
GluI GCNGC 7 cut(s) 18, 21, 24, 77, 1398, 1401, 1404
GsaI CCCAGC 1 cut(s) 1349
GsuI CTGGAG 1 cut(s) 175
HaeIII GGCC 6 cut(s) 59, 63, 219, 338, 697, 1376
HapII CCGG 5 cut(s) 56, 60, 351, 484, 1150
HgaI GACGC 1 cut(s) 510
Hin1I GRCGYC 1 cut(s) 521
HincII GTYRAC 1 cut(s) 325
HindII GTYRAC 1 cut(s) 325
HindIII AAGCTT 1 cut(s) 740
HinfI GANTC 7 cut(s) 35, 52, 137, 186, 209, 426, 1153
HpaII CCGG 5 cut(s) 56, 60, 351, 484, 1150
HphI GGTGA 5 cut(s) 166, 689, 805, 1054, 1297
Hpy166II GTNNAC 2 cut(s) 325, 723
Hpy188I TCNGA 5 cut(s) 40, 307, 425, 657, 919
Hpy188III TCNNGA 6 cut(s) 397, 525, 731, 813, 939, 1030
Hpy8I GTNNAC 2 cut(s) 325, 723
Hpy99I CGWCG 7 cut(s) 13, 16, 44, 311, 314, 497, 526
HpyAV CCTTC 2 cut(s) 550, 1384
HpyCH4III ACNGT 1 cut(s) 1213
HpyCH4IV ACGT 1 cut(s) 264
HpyCH4V TGCA 8 cut(s) 76, 716, 907, 1161, 1268, 1279, 1312, 1403
HpyF10VI GCNNNNNNNGC 7 cut(s) 23, 111, 225, 1167, 1301, 1355, 1403
HpyF3I CTNAG 6 cut(s) 663, 849, 887, 999, 1238, 1359
HpySE526I ACGT 1 cut(s) 264
Hsp92I GRCGYC 1 cut(s) 521
KroI GCCGGC 1 cut(s) 59
KroNI GCCGGC 1 cut(s) 61
Kzo9I GATC 4 cut(s) 652, 666, 941, 1034
LmnI GCTCC 1 cut(s) 366
Lsp1109I GCAGC 4 cut(s) 88, 1387, 1409, 1415
MaeI CTAG 4 cut(s) 699, 1019, 1167, 1420
MaeII ACGT 1 cut(s) 264
MaeIII GTNAC 2 cut(s) 49, 206
MalI GATC 4 cut(s) 654, 668, 943, 1036
MboI GATC 4 cut(s) 652, 666, 941, 1034
MboII GAAGA 6 cut(s) 61, 294, 760, 1069, 1214, 1382
MhlI GDGCHC 3 cut(s) 48, 363, 693
MluCI AATT 6 cut(s) 704, 861, 934, 1092, 1144, 1206
MlyI GAGTC 4 cut(s) 29, 46, 131, 203
MmeI TCCRAC 3 cut(s) 63, 330, 1195
MroNI GCCGGC 1 cut(s) 59
MroXI GAANNNNTTC 1 cut(s) 934
MspA1I CMGCKG 1 cut(s) 1400
MspI CCGG 5 cut(s) 56, 60, 351, 484, 1150
MspR9I CCNGG 5 cut(s) 152, 335, 500, 900, 1138
MvaI CCWGG 5 cut(s) 152, 335, 500, 900, 1138
MwoI GCNNNNNNNGC 7 cut(s) 23, 111, 225, 1167, 1301, 1355, 1403
NaeI GCCGGC 1 cut(s) 61
NdeII GATC 4 cut(s) 652, 666, 941, 1034
NgoMIV GCCGGC 1 cut(s) 59
NlaIV GGNNCC 1 cut(s) 362
NmeAIII GCCGAG 1 cut(s) 245
NmuCI GTSAC 2 cut(s) 49, 206
NspI RCATGY 2 cut(s) 970, 1312
NspV TTCGAA 1 cut(s) 1368
PaeI GCATGC 1 cut(s) 970
PceI AGGCCT 1 cut(s) 1376
PcsI WCGNNNNNNNCGW 3 cut(s) 261, 276, 318
PdiI GCCGGC 1 cut(s) 61
PdmI GAANNNNTTC 1 cut(s) 934
PfeI GAWTC 3 cut(s) 186, 426, 1153
PflFI GACNNNGTC 1 cut(s) 284
PflMI CCANNNNNTGG 1 cut(s) 439
PkrI GCNGC 7 cut(s) 19, 22, 25, 78, 1399, 1402, 1405
PleI GAGTC 4 cut(s) 29, 46, 131, 203
PpsI GAGTC 4 cut(s) 29, 46, 131, 203
PpuMI RGGWCCY 1 cut(s) 159
PshAI GACNNNNGTC 1 cut(s) 320
Psp124BI GAGCTC 1 cut(s) 693
Psp5II RGGWCCY 1 cut(s) 159
Psp6I CCWGG 5 cut(s) 150, 333, 498, 898, 1136
PspFI CCCAGC 1 cut(s) 1345
PspGI CCWGG 5 cut(s) 150, 333, 498, 898, 1136
PspN4I GGNNCC 1 cut(s) 362
PspPI GGNCC 4 cut(s) 159, 823, 1121, 1193
PspPPI RGGWCCY 1 cut(s) 159
PstI CTGCAG 2 cut(s) 78, 1405
PsyI GACNNNGTC 1 cut(s) 284
PvuII CAGCTG 1 cut(s) 1400
RigI GGCCGGCC 1 cut(s) 63
RsaI GTAC 2 cut(s) 535, 783
RsaNI GTAC 2 cut(s) 534, 782
Rsr2I CGGWCCG 1 cut(s) 1193
RsrII CGGWCCG 1 cut(s) 1193
SacI GAGCTC 1 cut(s) 693
SatI GCNGC 7 cut(s) 18, 21, 24, 77, 1398, 1401, 1404
Sau3AI GATC 4 cut(s) 652, 666, 941, 1034
Sau96I GGNCC 4 cut(s) 159, 823, 1121, 1193
ScaI AGTACT 1 cut(s) 535
SchI GAGTC 4 cut(s) 29, 46, 131, 203
ScrFI CCNGG 5 cut(s) 152, 335, 500, 900, 1138
SduI GDGCHC 3 cut(s) 48, 363, 693
SfcI CTRYAG 3 cut(s) 74, 1068, 1401
SfuI TTCGAA 1 cut(s) 1368
SinI GGWCC 4 cut(s) 159, 823, 1121, 1193
SmlI CTYRAG 1 cut(s) 1028
SmoI CTYRAG 1 cut(s) 1028
SphI GCATGC 1 cut(s) 970
Sse9I AATT 6 cut(s) 704, 861, 934, 1092, 1144, 1206
SseBI AGGCCT 1 cut(s) 1376
SsiI CCGC 8 cut(s) 17, 20, 23, 259, 318, 579, 675, 1196
SspI AATATT 1 cut(s) 1317
SspMI CTAG 4 cut(s) 699, 1019, 1167, 1420
SstI GAGCTC 1 cut(s) 693
StuI AGGCCT 1 cut(s) 1376
StyD4I CCNGG 5 cut(s) 150, 333, 498, 898, 1136
StyI CCWWGG 1 cut(s) 698
TaaI ACNGT 1 cut(s) 1213
TaiI ACGT 1 cut(s) 267
TaqI TCGA 5 cut(s) 129, 135, 249, 255, 1368
TaqII GACCGA 1 cut(s) 1181
TasI AATT 6 cut(s) 704, 861, 934, 1092, 1144, 1206
TatI WGTACW 2 cut(s) 533, 781
TauI GCSGC 3 cut(s) 20, 23, 26
TfiI GAWTC 3 cut(s) 186, 426, 1153
TscAI CASTG 1 cut(s) 676
TseFI GTSAC 2 cut(s) 49, 206
TseI GCWGC 4 cut(s) 76, 1397, 1400, 1403
Tsp45I GTSAC 2 cut(s) 49, 206
TspDTI ATGAA 6 cut(s) 101, 380, 752, 789, 1239, 1403
TspRI CASTG 1 cut(s) 676
Tth111I GACNNNGTC 1 cut(s) 284
Van91I CCANNNNNTGG 1 cut(s) 439
VpaK11BI GGWCC 4 cut(s) 159, 823, 1121, 1193
XceI RCATGY 2 cut(s) 970, 1312
XmaJI CCTAGG 1 cut(s) 698
XmnI GAANNNNTTC 1 cut(s) 934
XspI CTAG 4 cut(s) 699, 1019, 1167, 1420
ZrmI AGTACT 1 cut(s) 535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.