Rh3AG010700

O-acyltransferase (WSD1-like)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
662576 .. 662902
327 bp
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UTR
Exon/CDS
Intron
Rh3AG010700.1

Sequence Viewer

Length: 327 bp
ATGCTCACCCACCCAAGATTCTCTAGCCTCATGATGCGTGACTCCCACTGCCGAGAACGTTGGCACAAAACCACCCAAATCGACCCTGACCGCCACGTCATCATCCTTCACCACCTCGTCTCCTCCGGCGTTGATGATGAGACCGCCGTCAATGACTACTTGGCCGACCTCTCCACCGACTCGGGGCTCTCTACCGACAAACCCTTGTGGGAGTTTCATATTTTGATTGCTCACAATGTTGGGATTTTCCGAATCCATCATGCTTTAGGAGATGGGATATCGCTTATGTTAATGTTTTTGGCGAGTTGCTGGAGTGCCGAAGACTAG

Protein Analysis

108

Amino Acids

12.33

Weight (kDa)

5.7

Isoelectric Point (pI)

37.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 95
AciI CCGC 2 cut(s) 91, 144
AclI AACGTT 1 cut(s) 58
AcoI YGGCCR 1 cut(s) 162
AfiI CCNNNNNNNGG 1 cut(s) 183
AjiI CACGTC 1 cut(s) 97
Alw26I GTCTC 2 cut(s) 124, 134
Ama87I CYCGRG 1 cut(s) 181
AoxI GGCC 1 cut(s) 162
AsuHPI GGTGA 1 cut(s) 101
AvaI CYCGRG 1 cut(s) 181
BanII GRGCYC 1 cut(s) 189
BccI CCATC 2 cut(s) 264, 266
BceAI ACGGC 1 cut(s) 131
BcoDI GTCTC 2 cut(s) 124, 134
BfaI CTAG 2 cut(s) 24, 325
BmeT110I CYCGRG 1 cut(s) 181
BmgBI CACGTC 1 cut(s) 97
BmsI GCATC 1 cut(s) 24
BoxI GACNNNNGTC 1 cut(s) 146
BsaI GGTCTC 1 cut(s) 134
BsaXI ACNNNNNCTCC 2 cut(s) 104, 134
Bsc4I CCNNNNNNNGG 1 cut(s) 183
BseGI GGATG 1 cut(s) 102
BseLI CCNNNNNNNGG 1 cut(s) 183
BseRI GAGGAG 1 cut(s) 112
BshFI GGCC 1 cut(s) 164
BsiHKCI CYCGRG 1 cut(s) 181
BsiSI CCGG 1 cut(s) 126
BslI CCNNNNNNNGG 1 cut(s) 183
BsmAI GTCTC 2 cut(s) 124, 134
BsmBI CGTCTC 1 cut(s) 124
BsnI GGCC 1 cut(s) 164
Bso31I GGTCTC 1 cut(s) 134
BsoBI CYCGRG 1 cut(s) 181
Bsp1286I GDGCHC 1 cut(s) 189
BspACI CCGC 2 cut(s) 91, 144
BspANI GGCC 1 cut(s) 164
BspHI TCATGA 1 cut(s) 30
BspTNI GGTCTC 1 cut(s) 134
BstF5I GGATG 1 cut(s) 102
BstMAI GTCTC 2 cut(s) 124, 134
BstPAI GACNNNNGTC 1 cut(s) 146
BsuRI GGCC 1 cut(s) 164
BtrI CACGTC 1 cut(s) 97
BtsCI GGATG 1 cut(s) 102
BtsI GCAGTG 1 cut(s) 46
BtsIMutI CAGTG 1 cut(s) 46
CciI TCATGA 1 cut(s) 30
CviAII CATG 2 cut(s) 31, 260
CviJI RGCY 3 cut(s) 27, 164, 187
CviKI_1 RGCY 3 cut(s) 27, 164, 187
DrdI GACNNNNNNGTC 1 cut(s) 95
DseDI GACNNNNNNGTC 1 cut(s) 95
EaeI YGGCCR 1 cut(s) 162
Eco24I GRGCYC 1 cut(s) 189
Eco31I GGTCTC 1 cut(s) 134
Eco32I GATATC 1 cut(s) 279
Eco88I CYCGRG 1 cut(s) 181
EcoRV GATATC 1 cut(s) 279
EcoT38I GRGCYC 1 cut(s) 189
Esp3I CGTCTC 1 cut(s) 124
FaeI CATG 2 cut(s) 34, 263
FaiI YATR 4 cut(s) 32, 219, 261, 287
FatI CATG 2 cut(s) 30, 259
FokI GGATG 1 cut(s) 89
FriOI GRGCYC 1 cut(s) 189
FspBI CTAG 2 cut(s) 24, 325
HaeIII GGCC 1 cut(s) 164
HapII CCGG 1 cut(s) 126
Hin1II CATG 2 cut(s) 34, 263
HinfI GANTC 4 cut(s) 18, 41, 179, 252
HpaII CCGG 1 cut(s) 126
HphI GGTGA 1 cut(s) 101
Hpy188I TCNGA 1 cut(s) 251
Hpy188III TCNNGA 1 cut(s) 31
HpyAV CCTTC 1 cut(s) 116
HpyCH4IV ACGT 2 cut(s) 58, 96
HpySE526I ACGT 2 cut(s) 58, 96
Hsp92II CATG 2 cut(s) 34, 263
LpnPI CCDG 3 cut(s) 99, 139, 295
LweI GCATC 1 cut(s) 24
MaeI CTAG 2 cut(s) 24, 325
MaeII ACGT 2 cut(s) 58, 96
MaeIII GTNAC 1 cut(s) 38
MhlI GDGCHC 1 cut(s) 189
MlyI GAGTC 2 cut(s) 35, 173
MnlI CCTC 4 cut(s) 38, 125, 133, 179
MseI TTAA 1 cut(s) 290
MspI CCGG 1 cut(s) 126
NlaIII CATG 2 cut(s) 34, 263
NmeAIII GCCGAG 1 cut(s) 77
NmuCI GTSAC 1 cut(s) 38
PagI TCATGA 1 cut(s) 30
PfeI GAWTC 2 cut(s) 18, 252
PleI GAGTC 2 cut(s) 35, 173
PpsI GAGTC 2 cut(s) 35, 173
PshAI GACNNNNGTC 1 cut(s) 146
Psp1406I AACGTT 1 cut(s) 58
SaqAI TTAA 1 cut(s) 290
SchI GAGTC 2 cut(s) 35, 173
SduI GDGCHC 1 cut(s) 189
SetI ASST 4 cut(s) 61, 99, 117, 171
SfaNI GCATC 1 cut(s) 24
SsiI CCGC 2 cut(s) 91, 144
SspMI CTAG 2 cut(s) 24, 325
TaiI ACGT 2 cut(s) 61, 99
TaqI TCGA 1 cut(s) 81
TfiI GAWTC 2 cut(s) 18, 252
Tru1I TTAA 1 cut(s) 290
Tru9I TTAA 1 cut(s) 290
TscAI CASTG 1 cut(s) 53
TseFI GTSAC 1 cut(s) 38
Tsp45I GTSAC 1 cut(s) 38
TspDTI ATGAA 1 cut(s) 206
TspRI CASTG 1 cut(s) 53
XspI CTAG 2 cut(s) 24, 325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.