Rh6AG083100

O-acyltransferase (WSD1-like)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
12477756 .. 12479680
1925 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG083100.1

Sequence Viewer

Length: 1416 bp
ATGGGTTCGTCGGCGGCAGCTGCAACAACCGACTCCGACGAGCCCGTGACTCCGGCCGGCCGTCTCTTCCTGCAGCCCCAAATGAACCAAATAATCTACTGCGTCATGGGCTTCAAAAACCCAATCGACATCGACTCCATCAAATCCCAGGTCAGGTCCTCCCTCATGCTCACCCACCCAAGATTCTCCAGCCTCATGGTGCGTGACTCCCACGGCCGAGAACGCTGGCACAAAACCACCCACATCGACCTCGACCGCCACGTCATCGTCCTCCACGACCCCGTCTCCTCCTCCTCTTCCGACGACGAGACCGCCGTCAACGACTACCTGGCCGACCTCTCGACCGGCTCGGGGCTCCCCACCGACAAACCCATGTGGGAGTTTCATCTCCTGATTGCTCACAAAGTTGGGATATTCCGAATCCACCATGCTTTGGGAGATGGGATATCGCTTATGTCCATGTTCTTGGCGAGTTGCCGGAGAGCCGACGACGAGGAGAAGTTGCCGACTTTGGCGTCGGGAAAGAGTGCTAAAGGTGTGAATGAGAGGAAGGGTCTGTGGGTTTTGCTGTGCGGGTTTGTGGCAATGGTGTGGTTTAGCATGGTGTTTGTGGTGGCGTTTCTGGTGAGGTGTTTGTGGGTTTGTGATCGGAAAACTGAGATCAGTGGCGGTGATGGGGTTGAGCTCTGGCCTAGGAAATTAGCTACTGCAAAGTTTAGGCTTCAAGATATGAAGCTTGTGAAGAAAGCTGTTCCTAATGCGACCATCAATGATGTACTTTTTGGGGTGATTTCATCAGGGATATCAAGATACTTGGACCACAGAAAACCAAATGCTTTGCCTGAGGGTGTTCAAATTACAGGGGTAGCTATGACTAATCTAAGAGAGCTACCTGGATTGCAGGAACTGTCCGATTTGATGAGAAGCAATTCAGGATCAAGTTGGGGCAACAAGTTCGGCATGCTTCTCCTACCTATATATTATCATAACTCTAAGAGCAATGGCGACCCTCTAGCCTATCTCAAGAGATCAAAGGTGATGATTGACAAGAAGAAGCAATCTGTAGAGGGTCATTTCTCATACAAAATTGGGTTGTTTGTGATGACCAACTTTGGACCAAAGGTTGCTACCTGGCTGAATTACCGGATTCTCTGCAATACTAGCTTTACTATCTCAAATATACTCGGTCCACAAGAAGAAATTACAGTTGGAGGCAACCCTATAACTTACCTAAGAGCCAGTTCATCAAGTTTGCCCCATGCACTCACAATGCACATGGTGAGCTATGCTGAAAGGGCAGACATGCAAATATTGGTGGCTAAAGATATCATCCCTGACCCAGCATTTCTCGCTAAGTGCTTCGAAGAGGCCTTACTTGATATGAAGGAAGCAGCTGCAGCCATCACAGAAACCTAG

Protein Analysis

471

Amino Acids

52.19

Weight (kDa)

8.35

Isoelectric Point (pI)

40.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WS_DGAT_cat PF03007 70 - 173 1.9e-06 Wax ester synthase/diacylglycerol acyltransferase catalytic domain
WS_DGAT_C PF06974 315 - 462 1.7e-41 WS/DGAT C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 260, 514
AccB7I CCANNNNNTGG 1 cut(s) 433
AciI CCGC 5 cut(s) 14, 256, 312, 573, 669
AclWI GGATC 1 cut(s) 943
AcoI YGGCCR 4 cut(s) 54, 58, 214, 330
AcyI GRCGYC 1 cut(s) 515
AdeI CACNNNGTG 1 cut(s) 1279
AfaI GTAC 1 cut(s) 777
AfiI CCNNNNNNNGG 3 cut(s) 153, 351, 433
AgsI TTSAA 3 cut(s) 115, 725, 854
AjiI CACGTC 1 cut(s) 262
AjnI CCWGG 4 cut(s) 147, 327, 892, 1130
AjuI GAANNNNNNNTTGG 2 cut(s) 1191, 1223
Alw21I GWGCWC 1 cut(s) 687
Alw26I GTCTC 3 cut(s) 68, 289, 302
AlwI GGATC 1 cut(s) 943
AlwNI CAGNNNCTG 1 cut(s) 907
Ama87I CYCGRG 1 cut(s) 349
AoxI GGCC 6 cut(s) 54, 58, 214, 330, 689, 1368
ApeKI GCWGC 6 cut(s) 17, 20, 73, 1391, 1394, 1397
ArsI GACNNNNNNTTYG 2 cut(s) 135, 167
Asp700I GAANNNNTTC 1 cut(s) 928
AspA2I CCTAGG 1 cut(s) 692
AspS9I GGNCC 4 cut(s) 156, 817, 1115, 1187
AsuHPI GGTGA 6 cut(s) 163, 637, 683, 799, 1048, 1291
AsuII TTCGAA 1 cut(s) 1362
AvaI CYCGRG 1 cut(s) 349
AvaII GGWCC 4 cut(s) 156, 817, 1115, 1187
AvrII CCTAGG 1 cut(s) 692
AxyI CCTNAGG 1 cut(s) 843
BanII GRGCYC 3 cut(s) 45, 357, 687
BarI GAAGNNNNNNTAC 2 cut(s) 1356, 1388
Bbv12I GWGCWC 1 cut(s) 687
BbvI GCAGC 6 cut(s) 7, 29, 85, 1381, 1403, 1409
BccI CCATC 5 cut(s) 146, 434, 668, 773, 1409
BceAI ACGGC 3 cut(s) 45, 229, 299
BcgI CGANNNNNNTGC 2 cut(s) 937, 971
BciT130I CCWGG 4 cut(s) 149, 329, 894, 1132
BcoDI GTCTC 3 cut(s) 68, 289, 302
BfaI CTAG 4 cut(s) 693, 1013, 1161, 1414
BfmI CTRYAG 3 cut(s) 71, 1062, 1395
BisI GCNGC 7 cut(s) 15, 18, 21, 74, 1392, 1395, 1398
BlnI CCTAGG 1 cut(s) 692
BlsI GCNGC 7 cut(s) 16, 19, 22, 75, 1393, 1396, 1399
Bme1390I CCNGG 4 cut(s) 149, 329, 894, 1132
Bme18I GGWCC 4 cut(s) 156, 817, 1115, 1187
BmeT110I CYCGRG 1 cut(s) 349
BmgBI CACGTC 1 cut(s) 262
BmgT120I GGNCC 4 cut(s) 156, 817, 1115, 1187
BmiI GGNNCC 1 cut(s) 356
BmrFI CCNGG 4 cut(s) 149, 329, 894, 1132
BoxI GACNNNNGTC 1 cut(s) 314
BpmI CTGGAG 1 cut(s) 172
Bpu14I TTCGAA 1 cut(s) 1362
BpuEI CTTGAG 1 cut(s) 1007
BsaHI GRCGYC 1 cut(s) 515
BsaI GGTCTC 1 cut(s) 302
BsaJI CCNNGG 3 cut(s) 147, 211, 692
BsaWI WCCGGW 1 cut(s) 1143
BsaXI ACNNNNNCTCC 4 cut(s) 119, 149, 269, 299
Bsc4I CCNNNNNNNGG 3 cut(s) 153, 351, 433
Bse118I RCCGGY 2 cut(s) 56, 344
Bse1I ACTGG 1 cut(s) 1239
Bse21I CCTNAGG 1 cut(s) 843
Bse3DI GCAATG 2 cut(s) 591, 1006
BseBI CCWGG 4 cut(s) 149, 329, 894, 1132
BseDI CCNNGG 3 cut(s) 147, 211, 692
BseGI GGATG 1 cut(s) 1329
BseLI CCNNNNNNNGG 3 cut(s) 153, 351, 433
BseMI GCAATG 2 cut(s) 591, 1006
BseMII CTCAG 2 cut(s) 648, 834
BseNI ACTGG 1 cut(s) 1239
BseRI GAGGAG 4 cut(s) 277, 280, 283, 509
BseX3I CGGCCG 3 cut(s) 54, 58, 214
BseXI GCAGC 6 cut(s) 7, 29, 85, 1381, 1403, 1409
BseYI CCCAGC 1 cut(s) 1339
Bsh1285I CGRYCG 5 cut(s) 57, 61, 217, 256, 345
BshFI GGCC 6 cut(s) 56, 60, 216, 332, 691, 1370
BsiEI CGRYCG 5 cut(s) 57, 61, 217, 256, 345
BsiHKAI GWGCWC 1 cut(s) 687
BsiHKCI CYCGRG 1 cut(s) 349
BsiSI CCGG 5 cut(s) 53, 57, 345, 478, 1144
BslI CCNNNNNNNGG 3 cut(s) 153, 351, 433
BsmAI GTCTC 3 cut(s) 68, 289, 302
BsmBI CGTCTC 2 cut(s) 68, 289
BsnI GGCC 6 cut(s) 56, 60, 216, 332, 691, 1370
Bso31I GGTCTC 1 cut(s) 302
BsoBI CYCGRG 1 cut(s) 349
Bsp119I TTCGAA 1 cut(s) 1362
Bsp1286I GDGCHC 3 cut(s) 45, 357, 687
Bsp143I GATC 4 cut(s) 646, 660, 935, 1028
BspACI CCGC 5 cut(s) 14, 256, 312, 573, 669
BspANI GGCC 6 cut(s) 56, 60, 216, 332, 691, 1370
BspCNI CTCAG 2 cut(s) 649, 835
BspLI GGNNCC 1 cut(s) 356
BspMAI CTGCAG 2 cut(s) 75, 1399
BspPI GGATC 1 cut(s) 943
BspT104I TTCGAA 1 cut(s) 1362
BspTNI GGTCTC 1 cut(s) 302
BsrDI GCAATG 2 cut(s) 591, 1006
BsrFI RCCGGY 2 cut(s) 56, 344
BsrI ACTGG 1 cut(s) 1239
BssAI RCCGGY 2 cut(s) 56, 344
BssECI CCNNGG 3 cut(s) 147, 211, 692
BssMI GATC 4 cut(s) 646, 660, 935, 1028
BssNI GRCGYC 1 cut(s) 515
BssT1I CCWWGG 1 cut(s) 692
Bst2UI CCWGG 4 cut(s) 149, 329, 894, 1132
Bst4CI ACNGT 2 cut(s) 909, 1207
Bst6I CTCTTC 3 cut(s) 71, 301, 1359
BstACI GRCGYC 1 cut(s) 515
BstBI TTCGAA 1 cut(s) 1362
BstC8I GCNNGC 3 cut(s) 58, 227, 962
BstDEI CTNAG 6 cut(s) 657, 843, 881, 993, 1232, 1353
BstDSI CCRYGG 1 cut(s) 211
BstF5I GGATG 1 cut(s) 1329
BstKTI GATC 4 cut(s) 649, 663, 938, 1031
BstMAI GTCTC 3 cut(s) 68, 289, 302
BstMBI GATC 4 cut(s) 646, 660, 935, 1028
BstMCI CGRYCG 5 cut(s) 57, 61, 217, 256, 345
BstMWI GCNNNNNNNGC 7 cut(s) 20, 108, 222, 1161, 1295, 1349, 1397
BstNI CCWGG 4 cut(s) 149, 329, 894, 1132
BstNSI RCATGY 2 cut(s) 964, 1306
BstPAI GACNNNNGTC 1 cut(s) 314
BstSCI CCNGG 4 cut(s) 147, 327, 892, 1130
BstSFI CTRYAG 3 cut(s) 71, 1062, 1395
BstV1I GCAGC 6 cut(s) 7, 29, 85, 1381, 1403, 1409
BstXI CCANNNNNNTGG 2 cut(s) 196, 466
BstZI CGGCCG 3 cut(s) 54, 58, 214
Bsu36I CCTNAGG 1 cut(s) 843
BsuRI GGCC 6 cut(s) 56, 60, 216, 332, 691, 1370
BtgI CCRYGG 1 cut(s) 211
BtrI CACGTC 1 cut(s) 262
BtsCI GGATG 1 cut(s) 1329
BtsIMutI CAGTG 1 cut(s) 670
Cac8I GCNNGC 3 cut(s) 58, 227, 962
CaiI CAGNNNCTG 1 cut(s) 907
Cfr10I RCCGGY 2 cut(s) 56, 344
Cfr13I GGNCC 4 cut(s) 156, 817, 1115, 1187
CseI GACGC 2 cut(s) 91, 504
Csp6I GTAC 1 cut(s) 776
CviQI GTAC 1 cut(s) 776
DdeI CTNAG 6 cut(s) 657, 843, 881, 993, 1232, 1353
DpnI GATC 4 cut(s) 648, 662, 937, 1030
DpnII GATC 4 cut(s) 646, 660, 935, 1028
DraIII CACNNNGTG 1 cut(s) 1279
DrdI GACNNNNNNGTC 2 cut(s) 260, 514
DseDI GACNNNNNNGTC 2 cut(s) 260, 514
EaeI YGGCCR 4 cut(s) 54, 58, 214, 330
EagI CGGCCG 3 cut(s) 54, 58, 214
Eam1104I CTCTTC 3 cut(s) 71, 301, 1359
EarI CTCTTC 3 cut(s) 71, 301, 1359
Ecl136II GAGCTC 1 cut(s) 685
EclXI CGGCCG 3 cut(s) 54, 58, 214
Eco130I CCWWGG 1 cut(s) 692
Eco147I AGGCCT 1 cut(s) 1370
Eco24I GRGCYC 3 cut(s) 45, 357, 687
Eco31I GGTCTC 1 cut(s) 302
Eco32I GATATC 3 cut(s) 447, 804, 1327
Eco47I GGWCC 4 cut(s) 156, 817, 1115, 1187
Eco52I CGGCCG 3 cut(s) 54, 58, 214
Eco53kI GAGCTC 1 cut(s) 685
Eco81I CCTNAGG 1 cut(s) 843
Eco88I CYCGRG 1 cut(s) 349
EcoICRI GAGCTC 1 cut(s) 685
EcoO109I RGGNCCY 1 cut(s) 156
EcoRII CCWGG 4 cut(s) 147, 327, 892, 1130
EcoRV GATATC 3 cut(s) 447, 804, 1327
EcoT14I CCWWGG 1 cut(s) 692
EcoT38I GRGCYC 3 cut(s) 45, 357, 687
ErhI CCWWGG 1 cut(s) 692
Esp3I CGTCTC 2 cut(s) 68, 289
FauI CCCGC 1 cut(s) 566
Fnu4HI GCNGC 7 cut(s) 15, 18, 21, 74, 1392, 1395, 1398
FokI GGATG 1 cut(s) 1316
FriOI GRGCYC 3 cut(s) 45, 357, 687
FseI GGCCGGCC 1 cut(s) 60
Fsp4HI GCNGC 7 cut(s) 15, 18, 21, 74, 1392, 1395, 1398
FspBI CTAG 4 cut(s) 693, 1013, 1161, 1414
GluI GCNGC 7 cut(s) 15, 18, 21, 74, 1392, 1395, 1398
GsaI CCCAGC 1 cut(s) 1343
GsuI CTGGAG 1 cut(s) 172
HaeIII GGCC 6 cut(s) 56, 60, 216, 332, 691, 1370
HapII CCGG 5 cut(s) 53, 57, 345, 478, 1144
HgaI GACGC 2 cut(s) 91, 504
Hin1I GRCGYC 1 cut(s) 515
HincII GTYRAC 1 cut(s) 319
HindII GTYRAC 1 cut(s) 319
HindIII AAGCTT 1 cut(s) 734
HinfI GANTC 7 cut(s) 32, 49, 134, 183, 206, 420, 1147
HpaII CCGG 5 cut(s) 53, 57, 345, 478, 1144
HphI GGTGA 6 cut(s) 163, 637, 683, 799, 1048, 1291
Hpy166II GTNNAC 2 cut(s) 319, 1190
Hpy188I TCNGA 5 cut(s) 37, 301, 419, 651, 913
Hpy188III TCNNGA 7 cut(s) 340, 391, 519, 725, 807, 933, 1024
Hpy8I GTNNAC 2 cut(s) 319, 1190
Hpy99I CGWCG 7 cut(s) 13, 41, 305, 308, 491, 494, 520
HpyAV CCTTC 2 cut(s) 544, 1378
HpyCH4III ACNGT 2 cut(s) 909, 1207
HpyCH4IV ACGT 1 cut(s) 261
HpyCH4V TGCA 9 cut(s) 23, 73, 710, 901, 1155, 1262, 1273, 1306, 1397
HpyF10VI GCNNNNNNNGC 7 cut(s) 20, 108, 222, 1161, 1295, 1349, 1397
HpyF3I CTNAG 6 cut(s) 657, 843, 881, 993, 1232, 1353
HpySE526I ACGT 1 cut(s) 261
Hsp92I GRCGYC 1 cut(s) 515
KroI GCCGGC 1 cut(s) 56
KroNI GCCGGC 1 cut(s) 58
Kzo9I GATC 4 cut(s) 646, 660, 935, 1028
LmnI GCTCC 1 cut(s) 360
Lsp1109I GCAGC 6 cut(s) 7, 29, 85, 1381, 1403, 1409
MaeI CTAG 4 cut(s) 693, 1013, 1161, 1414
MaeII ACGT 1 cut(s) 261
MaeIII GTNAC 2 cut(s) 46, 203
MalI GATC 4 cut(s) 648, 662, 937, 1030
MboI GATC 4 cut(s) 646, 660, 935, 1028
MboII GAAGA 6 cut(s) 58, 288, 754, 1063, 1208, 1376
MhlI GDGCHC 3 cut(s) 45, 357, 687
MluCI AATT 6 cut(s) 698, 855, 928, 1086, 1138, 1200
MlyI GAGTC 4 cut(s) 26, 43, 128, 200
MmeI TCCRAC 3 cut(s) 60, 324, 1189
MroNI GCCGGC 1 cut(s) 56
MroXI GAANNNNTTC 1 cut(s) 928
MspA1I CMGCKG 2 cut(s) 20, 1394
MspI CCGG 5 cut(s) 53, 57, 345, 478, 1144
MspR9I CCNGG 4 cut(s) 149, 329, 894, 1132
MvaI CCWGG 4 cut(s) 149, 329, 894, 1132
MwoI GCNNNNNNNGC 7 cut(s) 20, 108, 222, 1161, 1295, 1349, 1397
NaeI GCCGGC 1 cut(s) 58
NdeII GATC 4 cut(s) 646, 660, 935, 1028
NgoMIV GCCGGC 1 cut(s) 56
NlaIV GGNNCC 1 cut(s) 356
NmeAIII GCCGAG 1 cut(s) 242
NmuCI GTSAC 2 cut(s) 46, 203
NspI RCATGY 2 cut(s) 964, 1306
NspV TTCGAA 1 cut(s) 1362
PaeI GCATGC 1 cut(s) 964
PceI AGGCCT 1 cut(s) 1370
PcsI WCGNNNNNNNCGW 3 cut(s) 258, 273, 312
PdiI GCCGGC 1 cut(s) 58
PdmI GAANNNNTTC 1 cut(s) 928
PfeI GAWTC 3 cut(s) 183, 420, 1147
PflFI GACNNNGTC 1 cut(s) 281
PflMI CCANNNNNTGG 1 cut(s) 433
PkrI GCNGC 7 cut(s) 16, 19, 22, 75, 1393, 1396, 1399
PleI GAGTC 4 cut(s) 26, 43, 128, 200
PpsI GAGTC 4 cut(s) 26, 43, 128, 200
PpuMI RGGWCCY 1 cut(s) 156
PshAI GACNNNNGTC 1 cut(s) 314
Psp124BI GAGCTC 1 cut(s) 687
Psp5II RGGWCCY 1 cut(s) 156
Psp6I CCWGG 4 cut(s) 147, 327, 892, 1130
PspFI CCCAGC 1 cut(s) 1339
PspGI CCWGG 4 cut(s) 147, 327, 892, 1130
PspN4I GGNNCC 1 cut(s) 356
PspPI GGNCC 4 cut(s) 156, 817, 1115, 1187
PspPPI RGGWCCY 1 cut(s) 156
PstI CTGCAG 2 cut(s) 75, 1399
PstNI CAGNNNCTG 1 cut(s) 907
PsyI GACNNNGTC 1 cut(s) 281
PvuII CAGCTG 2 cut(s) 20, 1394
RigI GGCCGGCC 1 cut(s) 60
RsaI GTAC 1 cut(s) 777
RsaNI GTAC 1 cut(s) 776
SacI GAGCTC 1 cut(s) 687
SatI GCNGC 7 cut(s) 15, 18, 21, 74, 1392, 1395, 1398
Sau3AI GATC 4 cut(s) 646, 660, 935, 1028
Sau96I GGNCC 4 cut(s) 156, 817, 1115, 1187
SchI GAGTC 4 cut(s) 26, 43, 128, 200
ScrFI CCNGG 4 cut(s) 149, 329, 894, 1132
SduI GDGCHC 3 cut(s) 45, 357, 687
SfcI CTRYAG 3 cut(s) 71, 1062, 1395
SfuI TTCGAA 1 cut(s) 1362
SinI GGWCC 4 cut(s) 156, 817, 1115, 1187
SmlI CTYRAG 1 cut(s) 1022
SmoI CTYRAG 1 cut(s) 1022
SphI GCATGC 1 cut(s) 964
Sse9I AATT 6 cut(s) 698, 855, 928, 1086, 1138, 1200
SseBI AGGCCT 1 cut(s) 1370
SsiI CCGC 5 cut(s) 14, 256, 312, 573, 669
SspI AATATT 1 cut(s) 1311
SspMI CTAG 4 cut(s) 693, 1013, 1161, 1414
SstI GAGCTC 1 cut(s) 687
StuI AGGCCT 1 cut(s) 1370
StyD4I CCNGG 4 cut(s) 147, 327, 892, 1130
StyI CCWWGG 1 cut(s) 692
TaaI ACNGT 2 cut(s) 909, 1207
TaiI ACGT 1 cut(s) 264
TaqI TCGA 6 cut(s) 126, 132, 246, 252, 341, 1362
TaqII GACCGA 1 cut(s) 1175
TasI AATT 6 cut(s) 698, 855, 928, 1086, 1138, 1200
TatI WGTACW 1 cut(s) 775
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 3 cut(s) 183, 420, 1147
TscAI CASTG 1 cut(s) 670
TseFI GTSAC 2 cut(s) 46, 203
TseI GCWGC 6 cut(s) 17, 20, 73, 1391, 1394, 1397
Tsp45I GTSAC 2 cut(s) 46, 203
TspDTI ATGAA 6 cut(s) 98, 374, 746, 783, 1233, 1397
TspRI CASTG 1 cut(s) 670
Tth111I GACNNNGTC 1 cut(s) 281
Van91I CCANNNNNTGG 1 cut(s) 433
VpaK11BI GGWCC 4 cut(s) 156, 817, 1115, 1187
XceI RCATGY 2 cut(s) 964, 1306
XmaJI CCTAGG 1 cut(s) 692
XmnI GAANNNNTTC 1 cut(s) 928
XspI CTAG 4 cut(s) 693, 1013, 1161, 1414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.