Heterogeneous nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g30961 |
| malus_domestica | MD00G1000100.v1.1 MD10G1108000.v1.1 MD17G1252100.v1.1 |
| prunus_persica | Prupe.1G291300_v2.0.a1 Prupe.7G065200_v2.0.a1 |
| pyrus_communis | pycom11g17820 |
| rosa_chinensis | RchiOBHm_Chr6g0273961 |
| rosa_multiflora | Rmu_sc0002299.1_g000004 Rmu_sc0006493.1_g000007 Rmu_sc0024602.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00049870 |
| rosa_rugosa | Rorug01G0485500 Rorug05G0082700 |
| rosa_samantha | Rh2DG235300 Rh6BG083700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 146 |
| AccI | GTMKAC | 1 cut(s) | 26 |
| AciI | CCGC | 1 cut(s) | 126 |
| AclWI | GGATC | 1 cut(s) | 128 |
| AcsI | RAATTY | 1 cut(s) | 248 |
| AcuI | CTGAAG | 2 cut(s) | 154, 179 |
| AcyI | GRCGYC | 1 cut(s) | 143 |
| AfaI | GTAC | 1 cut(s) | 167 |
| AgsI | TTSAA | 1 cut(s) | 271 |
| AluBI | AGCT | 1 cut(s) | 231 |
| AluI | AGCT | 1 cut(s) | 231 |
| Alw21I | GWGCWC | 1 cut(s) | 233 |
| Alw26I | GTCTC | 2 cut(s) | 9, 134 |
| AlwI | GGATC | 1 cut(s) | 128 |
| ApoI | RAATTY | 1 cut(s) | 248 |
| BanII | GRGCYC | 1 cut(s) | 233 |
| BbsI | GAAGAC | 1 cut(s) | 109 |
| Bbv12I | GWGCWC | 1 cut(s) | 233 |
| BccI | CCATC | 1 cut(s) | 105 |
| BceAI | ACGGC | 1 cut(s) | 196 |
| BcoDI | GTCTC | 2 cut(s) | 9, 134 |
| BmcAI | AGTACT | 1 cut(s) | 167 |
| BpiI | GAAGAC | 1 cut(s) | 109 |
| BpuEI | CTTGAG | 1 cut(s) | 217 |
| BsaBI | GATNNNNATC | 1 cut(s) | 119 |
| BsaHI | GRCGYC | 1 cut(s) | 143 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 22, 52 |
| Bse1I | ACTGG | 1 cut(s) | 300 |
| Bse8I | GATNNNNATC | 1 cut(s) | 119 |
| BseJI | GATNNNNATC | 1 cut(s) | 119 |
| BseNI | ACTGG | 1 cut(s) | 300 |
| BsiHKAI | GWGCWC | 1 cut(s) | 233 |
| BsmAI | GTCTC | 2 cut(s) | 9, 134 |
| BsmBI | CGTCTC | 1 cut(s) | 134 |
| Bsp1286I | GDGCHC | 1 cut(s) | 233 |
| Bsp143I | GATC | 1 cut(s) | 120 |
| BspACI | CCGC | 1 cut(s) | 126 |
| BspPI | GGATC | 1 cut(s) | 128 |
| BsrI | ACTGG | 1 cut(s) | 300 |
| BssMI | GATC | 1 cut(s) | 120 |
| BssNI | GRCGYC | 1 cut(s) | 143 |
| BstACI | GRCGYC | 1 cut(s) | 143 |
| BstKTI | GATC | 1 cut(s) | 123 |
| BstMAI | GTCTC | 2 cut(s) | 9, 134 |
| BstMBI | GATC | 1 cut(s) | 120 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 180 |
| BstV2I | GAAGAC | 1 cut(s) | 109 |
| Csp6I | GTAC | 1 cut(s) | 166 |
| CviAII | CATG | 3 cut(s) | 135, 261, 279 |
| CviJI | RGCY | 1 cut(s) | 231 |
| CviKI_1 | RGCY | 1 cut(s) | 231 |
| CviQI | GTAC | 1 cut(s) | 166 |
| DpnI | GATC | 1 cut(s) | 122 |
| DpnII | GATC | 1 cut(s) | 120 |
| DraI | TTTAAA | 1 cut(s) | 76 |
| Ecl136II | GAGCTC | 1 cut(s) | 231 |
| Eco24I | GRGCYC | 1 cut(s) | 233 |
| Eco53kI | GAGCTC | 1 cut(s) | 231 |
| Eco57I | CTGAAG | 2 cut(s) | 154, 179 |
| EcoICRI | GAGCTC | 1 cut(s) | 231 |
| EcoT38I | GRGCYC | 1 cut(s) | 233 |
| Esp3I | CGTCTC | 1 cut(s) | 134 |
| FaeI | CATG | 3 cut(s) | 138, 264, 282 |
| FaiI | YATR | 7 cut(s) | 136, 218, 222, 262, 280, 284, 291 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 152, 184 |
| FatI | CATG | 3 cut(s) | 134, 260, 278 |
| FauI | CCCGC | 1 cut(s) | 119 |
| FblI | GTMKAC | 1 cut(s) | 26 |
| FriOI | GRGCYC | 1 cut(s) | 233 |
| Hin1I | GRCGYC | 1 cut(s) | 143 |
| Hin1II | CATG | 3 cut(s) | 138, 264, 282 |
| HincII | GTYRAC | 1 cut(s) | 27 |
| HindII | GTYRAC | 1 cut(s) | 27 |
| HinfI | GANTC | 1 cut(s) | 69 |
| Hpy166II | GTNNAC | 1 cut(s) | 27 |
| Hpy188I | TCNGA | 4 cut(s) | 148, 159, 211, 228 |
| Hpy8I | GTNNAC | 1 cut(s) | 27 |
| Hpy99I | CGWCG | 2 cut(s) | 28, 148 |
| HpyAV | CCTTC | 4 cut(s) | 81, 154, 267, 284 |
| HpyCH4IV | ACGT | 1 cut(s) | 143 |
| HpyCH4V | TGCA | 1 cut(s) | 60 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 180 |
| HpySE526I | ACGT | 1 cut(s) | 143 |
| Hsp92I | GRCGYC | 1 cut(s) | 143 |
| Hsp92II | CATG | 3 cut(s) | 138, 264, 282 |
| Kzo9I | GATC | 1 cut(s) | 120 |
| LpnPI | CCDG | 4 cut(s) | 55, 79, 121, 281 |
| MaeII | ACGT | 1 cut(s) | 143 |
| MalI | GATC | 1 cut(s) | 122 |
| MboI | GATC | 1 cut(s) | 120 |
| MboII | GAAGA | 2 cut(s) | 39, 114 |
| MhlI | GDGCHC | 1 cut(s) | 233 |
| MluCI | AATT | 3 cut(s) | 55, 175, 248 |
| MmeI | TCCRAC | 1 cut(s) | 126 |
| MnlI | CCTC | 3 cut(s) | 48, 87, 142 |
| MseI | TTAA | 2 cut(s) | 75, 83 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 180 |
| NdeII | GATC | 1 cut(s) | 120 |
| NlaIII | CATG | 3 cut(s) | 138, 264, 282 |
| PfeI | GAWTC | 1 cut(s) | 69 |
| Psp124BI | GAGCTC | 1 cut(s) | 233 |
| RsaI | GTAC | 1 cut(s) | 167 |
| RsaNI | GTAC | 1 cut(s) | 166 |
| SacI | GAGCTC | 1 cut(s) | 233 |
| SalI | GTCGAC | 1 cut(s) | 25 |
| SaqAI | TTAA | 2 cut(s) | 75, 83 |
| Sau3AI | GATC | 1 cut(s) | 120 |
| ScaI | AGTACT | 1 cut(s) | 167 |
| SduI | GDGCHC | 1 cut(s) | 233 |
| SetI | ASST | 3 cut(s) | 146, 233, 276 |
| SgeI | CNNG | 9 cut(s) | 34, 54, 78, 120, 139, 147, 246, 273, 291 |
| SmlI | CTYRAG | 1 cut(s) | 232 |
| SmoI | CTYRAG | 1 cut(s) | 232 |
| Sse9I | AATT | 3 cut(s) | 55, 175, 248 |
| SsiI | CCGC | 1 cut(s) | 126 |
| SstI | GAGCTC | 1 cut(s) | 233 |
| TaiI | ACGT | 1 cut(s) | 146 |
| TaqI | TCGA | 1 cut(s) | 26 |
| TasI | AATT | 3 cut(s) | 55, 175, 248 |
| TatI | WGTACW | 1 cut(s) | 165 |
| TfiI | GAWTC | 1 cut(s) | 69 |
| Tru1I | TTAA | 2 cut(s) | 75, 83 |
| Tru9I | TTAA | 2 cut(s) | 75, 83 |
| TspDTI | ATGAA | 2 cut(s) | 123, 249 |
| XapI | RAATTY | 1 cut(s) | 248 |
| XmiI | GTMKAC | 1 cut(s) | 26 |
| ZraI | GACGTC | 1 cut(s) | 144 |
| ZrmI | AGTACT | 1 cut(s) | 167 |