RchiOBHm_Chr6g0307641
BZIP Family

Ocs element-binding factor

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
65925537 .. 65925743
207 bp
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UTR
Exon/CDS
Intron
PRQ27659

Sequence Viewer

Length: 207 bp
ATGAGGGCTCAGGAGAAGGAGCTGACTGATCGACTTCGCTACTTGGAGTCGATTGAACAGACTTTTGTGGAGTTCAGCGGCGTCTTCGATAAGGACATTAACGACATGGCTGAGATGCATGACTCTCTGCTCAATCCGTGGCAGCTTCCTTACTCGACTCAGTCGATCACCGCTTCTTCTGCTAATATGTTTCTCGATTGGCCATGA

Protein Analysis

68

Amino Acids

7.99

Weight (kDa)

4.27

Isoelectric Point (pI)

49.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 78, 171
AcoI YGGCCR 1 cut(s) 200
AcyI GRCGYC 1 cut(s) 81
AgsI TTSAA 1 cut(s) 56
AluBI AGCT 2 cut(s) 22, 145
AluI AGCT 2 cut(s) 22, 145
AoxI GGCC 1 cut(s) 200
ApeKI GCWGC 1 cut(s) 142
AsuHPI GGTGA 1 cut(s) 160
BalI TGGCCA 1 cut(s) 202
BanII GRGCYC 1 cut(s) 10
BbsI GAAGAC 1 cut(s) 76
BbvI GCAGC 1 cut(s) 154
BisI GCNGC 2 cut(s) 79, 143
BlsI GCNGC 2 cut(s) 80, 144
BmsI GCATC 1 cut(s) 105
BpiI GAAGAC 1 cut(s) 76
Bpu10I CCTNAGC 1 cut(s) 9
BsaHI GRCGYC 1 cut(s) 81
BsaJI CCNNGG 1 cut(s) 137
BseDI CCNNGG 1 cut(s) 137
BseMII CTCAG 3 cut(s) 23, 102, 173
BseXI GCAGC 1 cut(s) 154
BshFI GGCC 1 cut(s) 202
BsnI GGCC 1 cut(s) 202
Bsp1286I GDGCHC 1 cut(s) 10
Bsp143I GATC 2 cut(s) 28, 165
BspACI CCGC 2 cut(s) 78, 171
BspANI GGCC 1 cut(s) 202
BspCNI CTCAG 3 cut(s) 22, 103, 172
BssECI CCNNGG 1 cut(s) 137
BssMI GATC 2 cut(s) 28, 165
BssNI GRCGYC 1 cut(s) 81
BstACI GRCGYC 1 cut(s) 81
BstDEI CTNAG 3 cut(s) 9, 111, 159
BstDSI CCRYGG 1 cut(s) 137
BstKTI GATC 2 cut(s) 31, 168
BstMBI GATC 2 cut(s) 28, 165
BstMWI GCNNNNNNNGC 1 cut(s) 179
BstV1I GCAGC 1 cut(s) 154
BstV2I GAAGAC 1 cut(s) 76
BsuRI GGCC 1 cut(s) 202
BtgI CCRYGG 1 cut(s) 137
CseI GACGC 1 cut(s) 70
CviAII CATG 3 cut(s) 106, 119, 204
CviJI RGCY 5 cut(s) 8, 22, 110, 145, 202
CviKI_1 RGCY 5 cut(s) 8, 22, 110, 145, 202
DdeI CTNAG 3 cut(s) 9, 111, 159
DpnI GATC 2 cut(s) 30, 167
DpnII GATC 2 cut(s) 28, 165
EaeI YGGCCR 1 cut(s) 200
Eco24I GRGCYC 1 cut(s) 10
EcoT22I ATGCAT 1 cut(s) 120
EcoT38I GRGCYC 1 cut(s) 10
FaeI CATG 3 cut(s) 109, 122, 207
FaiI YATR 4 cut(s) 107, 120, 188, 205
FatI CATG 3 cut(s) 105, 118, 203
Fnu4HI GCNGC 2 cut(s) 79, 143
FriOI GRGCYC 1 cut(s) 10
Fsp4HI GCNGC 2 cut(s) 79, 143
GluI GCNGC 2 cut(s) 79, 143
HaeIII GGCC 1 cut(s) 202
HgaI GACGC 1 cut(s) 70
Hin1I GRCGYC 1 cut(s) 81
Hin1II CATG 3 cut(s) 109, 122, 207
HinfI GANTC 3 cut(s) 47, 122, 157
HphI GGTGA 1 cut(s) 160
Hpy188III TCNNGA 2 cut(s) 11, 194
HpyAV CCTTC 1 cut(s) 10
HpyCH4V TGCA 1 cut(s) 118
HpyF10VI GCNNNNNNNGC 1 cut(s) 179
HpyF3I CTNAG 3 cut(s) 9, 111, 159
Hsp92I GRCGYC 1 cut(s) 81
Hsp92II CATG 3 cut(s) 109, 122, 207
Kzo9I GATC 2 cut(s) 28, 165
LmnI GCTCC 1 cut(s) 19
Lsp1109I GCAGC 1 cut(s) 154
LweI GCATC 1 cut(s) 105
MalI GATC 2 cut(s) 30, 167
MboI GATC 2 cut(s) 28, 165
MboII GAAGA 2 cut(s) 76, 168
MhlI GDGCHC 1 cut(s) 10
MlsI TGGCCA 1 cut(s) 202
MluNI TGGCCA 1 cut(s) 202
MlyI GAGTC 3 cut(s) 56, 116, 151
Mox20I TGGCCA 1 cut(s) 202
Mph1103I ATGCAT 1 cut(s) 120
MscI TGGCCA 1 cut(s) 202
MseI TTAA 1 cut(s) 99
Msp20I TGGCCA 1 cut(s) 202
MspA1I CMGCKG 1 cut(s) 78
MwoI GCNNNNNNNGC 1 cut(s) 179
NdeII GATC 2 cut(s) 28, 165
NlaIII CATG 3 cut(s) 109, 122, 207
NsiI ATGCAT 1 cut(s) 120
PcsI WCGNNNNNNNCGW 1 cut(s) 161
PflFI GACNNNGTC 1 cut(s) 160
PkrI GCNGC 2 cut(s) 80, 144
PleI GAGTC 3 cut(s) 55, 116, 151
PpsI GAGTC 3 cut(s) 55, 116, 151
PsyI GACNNNGTC 1 cut(s) 160
SaqAI TTAA 1 cut(s) 99
SatI GCNGC 2 cut(s) 79, 143
Sau3AI GATC 2 cut(s) 28, 165
SchI GAGTC 3 cut(s) 56, 116, 151
SduI GDGCHC 1 cut(s) 10
SetI ASST 2 cut(s) 24, 147
SfaNI GCATC 1 cut(s) 105
SgeI CNNG 6 cut(s) 23, 55, 118, 131, 150, 166
SsiI CCGC 2 cut(s) 78, 171
TaqI TCGA 6 cut(s) 31, 50, 87, 155, 164, 195
TauI GCSGC 1 cut(s) 81
Tru1I TTAA 1 cut(s) 99
Tru9I TTAA 1 cut(s) 99
TseI GCWGC 1 cut(s) 142
TspGWI ACGGA 1 cut(s) 126
Tth111I GACNNNGTC 1 cut(s) 160
Zsp2I ATGCAT 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.