pentatricopeptide repeat-containing protein At5g06400
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0454181 RchiOBHm_Chr6g0307821 |
| rosa_laevigata | RLG00000025477 |
| rosa_multiflora | Rmu_sc0002277.1_g000014 Rmu_sc0002277.1_g000015 Rmu_sc0004479.1_g000007 Rmu_sc0004483.1_g000001 Rmu_sc0006536.1_g000036 Rmu_ssc0000443.1_g000025 |
| rosa_roxburghii | Rroxscaffold_165G00436960 Rroxscaffold_1G00047680 Rroxscaffold_6G00425410 |
| rosa_rugosa | Rorug05G0188200 Rorug07G0270700 |
| rosa_samantha | Rh2AG431300 Rh2BG593100 Rh2CG156900 Rh2CG417200 Rh2DG449800 Rh3AG032900 Rh3AG158200 Rh3BG033100 Rh3BG182500 Rh3CG032000 Rh3CG173200 Rh3DG032900 Rh5BG425800 Rh5CG449900 Rh6AG432300 Rh7AG433200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 171 |
| AfaI | GTAC | 1 cut(s) | 116 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 92 |
| AgsI | TTSAA | 2 cut(s) | 26, 128 |
| AjnI | CCWGG | 1 cut(s) | 85 |
| AluBI | AGCT | 1 cut(s) | 175 |
| AluI | AGCT | 1 cut(s) | 175 |
| Alw21I | GWGCWC | 1 cut(s) | 177 |
| Alw26I | GTCTC | 1 cut(s) | 209 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 165 |
| AspS9I | GGNCC | 1 cut(s) | 53 |
| AsuC2I | CCSGG | 1 cut(s) | 205 |
| AsuHPI | GGTGA | 2 cut(s) | 101, 235 |
| AvaII | GGWCC | 1 cut(s) | 53 |
| BanII | GRGCYC | 1 cut(s) | 177 |
| BbsI | GAAGAC | 1 cut(s) | 116 |
| Bbv12I | GWGCWC | 1 cut(s) | 177 |
| BciT130I | CCWGG | 1 cut(s) | 87 |
| BcnI | CCSGG | 1 cut(s) | 205 |
| BcoDI | GTCTC | 1 cut(s) | 209 |
| Bme1390I | CCNGG | 2 cut(s) | 87, 205 |
| Bme18I | GGWCC | 1 cut(s) | 53 |
| BmgT120I | GGNCC | 1 cut(s) | 53 |
| BmrFI | CCNGG | 2 cut(s) | 87, 205 |
| BmsI | GCATC | 2 cut(s) | 64, 247 |
| BpiI | GAAGAC | 1 cut(s) | 116 |
| BpuEI | CTTGAG | 1 cut(s) | 161 |
| BpuMI | CCSGG | 1 cut(s) | 205 |
| BsaJI | CCNNGG | 1 cut(s) | 49 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 92 |
| BseBI | CCWGG | 1 cut(s) | 87 |
| BseDI | CCNNGG | 1 cut(s) | 49 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 92 |
| BsgI | GTGCAG | 1 cut(s) | 256 |
| Bsh1236I | CGCG | 1 cut(s) | 171 |
| BsiHKAI | GWGCWC | 1 cut(s) | 177 |
| BsiSI | CCGG | 1 cut(s) | 204 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 92 |
| BsmAI | GTCTC | 1 cut(s) | 209 |
| Bsp1286I | GDGCHC | 1 cut(s) | 177 |
| Bsp68I | TCGCGA | 1 cut(s) | 171 |
| BspFNI | CGCG | 1 cut(s) | 171 |
| BssECI | CCNNGG | 1 cut(s) | 49 |
| BssT1I | CCWWGG | 1 cut(s) | 49 |
| Bst2UI | CCWGG | 1 cut(s) | 87 |
| Bst4CI | ACNGT | 1 cut(s) | 234 |
| BstC8I | GCNNGC | 1 cut(s) | 173 |
| BstDEI | CTNAG | 1 cut(s) | 140 |
| BstFNI | CGCG | 1 cut(s) | 171 |
| BstMAI | GTCTC | 1 cut(s) | 209 |
| BstNI | CCWGG | 1 cut(s) | 87 |
| BstSCI | CCNGG | 2 cut(s) | 85, 203 |
| BstUI | CGCG | 1 cut(s) | 171 |
| BstV2I | GAAGAC | 1 cut(s) | 116 |
| BtuMI | TCGCGA | 1 cut(s) | 171 |
| Cac8I | GCNNGC | 1 cut(s) | 173 |
| Cfr13I | GGNCC | 1 cut(s) | 53 |
| Csp6I | GTAC | 1 cut(s) | 115 |
| CviJI | RGCY | 2 cut(s) | 175, 242 |
| CviKI_1 | RGCY | 2 cut(s) | 175, 242 |
| CviQI | GTAC | 1 cut(s) | 115 |
| DdeI | CTNAG | 1 cut(s) | 140 |
| Ecl136II | GAGCTC | 1 cut(s) | 175 |
| Eco130I | CCWWGG | 1 cut(s) | 49 |
| Eco24I | GRGCYC | 1 cut(s) | 177 |
| Eco47I | GGWCC | 1 cut(s) | 53 |
| Eco53kI | GAGCTC | 1 cut(s) | 175 |
| EcoICRI | GAGCTC | 1 cut(s) | 175 |
| EcoRII | CCWGG | 1 cut(s) | 85 |
| EcoT14I | CCWWGG | 1 cut(s) | 49 |
| EcoT38I | GRGCYC | 1 cut(s) | 177 |
| ErhI | CCWWGG | 1 cut(s) | 49 |
| FaiI | YATR | 5 cut(s) | 33, 110, 165, 194, 281 |
| FriOI | GRGCYC | 1 cut(s) | 177 |
| HapII | CCGG | 1 cut(s) | 204 |
| HinfI | GANTC | 2 cut(s) | 44, 144 |
| HpaII | CCGG | 1 cut(s) | 204 |
| HphI | GGTGA | 2 cut(s) | 101, 235 |
| Hpy166II | GTNNAC | 1 cut(s) | 313 |
| Hpy188I | TCNGA | 1 cut(s) | 149 |
| Hpy188III | TCNNGA | 3 cut(s) | 68, 170, 178 |
| Hpy8I | GTNNAC | 1 cut(s) | 313 |
| HpyAV | CCTTC | 2 cut(s) | 86, 97 |
| HpyCH4III | ACNGT | 1 cut(s) | 234 |
| HpyCH4V | TGCA | 3 cut(s) | 77, 237, 254 |
| HpyF3I | CTNAG | 1 cut(s) | 140 |
| LmnI | GCTCC | 1 cut(s) | 97 |
| LpnPI | CCDG | 5 cut(s) | 69, 72, 99, 217, 223 |
| LweI | GCATC | 2 cut(s) | 64, 247 |
| MboII | GAAGA | 3 cut(s) | 116, 128, 295 |
| MhlI | GDGCHC | 1 cut(s) | 177 |
| MluCI | AATT | 1 cut(s) | 39 |
| MnlI | CCTC | 2 cut(s) | 52, 181 |
| MroXI | GAANNNNTTC | 1 cut(s) | 165 |
| MspI | CCGG | 1 cut(s) | 204 |
| MspR9I | CCNGG | 2 cut(s) | 87, 205 |
| MvaI | CCWGG | 1 cut(s) | 87 |
| MvnI | CGCG | 1 cut(s) | 171 |
| NciI | CCSGG | 1 cut(s) | 205 |
| NruI | TCGCGA | 1 cut(s) | 171 |
| PdmI | GAANNNNTTC | 1 cut(s) | 165 |
| PfeI | GAWTC | 2 cut(s) | 44, 144 |
| Psp124BI | GAGCTC | 1 cut(s) | 177 |
| Psp6I | CCWGG | 1 cut(s) | 85 |
| PspGI | CCWGG | 1 cut(s) | 85 |
| PspPI | GGNCC | 1 cut(s) | 53 |
| RruI | TCGCGA | 1 cut(s) | 171 |
| RsaI | GTAC | 1 cut(s) | 116 |
| RsaNI | GTAC | 1 cut(s) | 115 |
| SacI | GAGCTC | 1 cut(s) | 177 |
| Sau96I | GGNCC | 1 cut(s) | 53 |
| ScrFI | CCNGG | 2 cut(s) | 87, 205 |
| SduI | GDGCHC | 1 cut(s) | 177 |
| SetI | ASST | 6 cut(s) | 21, 63, 91, 108, 177, 192 |
| SfaNI | GCATC | 2 cut(s) | 64, 247 |
| SinI | GGWCC | 1 cut(s) | 53 |
| SmlI | CTYRAG | 1 cut(s) | 176 |
| SmoI | CTYRAG | 1 cut(s) | 176 |
| Sse9I | AATT | 1 cut(s) | 39 |
| SstI | GAGCTC | 1 cut(s) | 177 |
| StyD4I | CCNGG | 2 cut(s) | 85, 203 |
| StyI | CCWWGG | 1 cut(s) | 49 |
| TaaI | ACNGT | 1 cut(s) | 234 |
| TasI | AATT | 1 cut(s) | 39 |
| TfiI | GAWTC | 2 cut(s) | 44, 144 |
| TspDTI | ATGAA | 1 cut(s) | 296 |
| VpaK11BI | GGWCC | 1 cut(s) | 53 |
| XmnI | GAANNNNTTC | 1 cut(s) | 165 |