No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0454181 RchiOBHm_Chr6g0307821 |
| rosa_laevigata | RLG00000025477 |
| rosa_multiflora | Rmu_sc0002277.1_g000014 Rmu_sc0002277.1_g000015 Rmu_sc0004479.1_g000007 Rmu_sc0004483.1_g000001 Rmu_sc0006536.1_g000036 Rmu_ssc0000443.1_g000025 |
| rosa_roxburghii | Rroxscaffold_165G00436960 Rroxscaffold_1G00047680 Rroxscaffold_6G00425410 |
| rosa_rugosa | Rorug05G0188200 Rorug07G0270700 |
| rosa_samantha | Rh2AG431300 Rh2BG593100 Rh2CG156900 Rh2CG417200 Rh2DG449800 Rh3AG032900 Rh3AG158200 Rh3BG033100 Rh3BG182500 Rh3CG032000 Rh3CG173200 Rh3DG032900 Rh5BG425800 Rh5CG449900 Rh6AG432300 Rh7AG433200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 137 |
| AgsI | TTSAA | 1 cut(s) | 13 |
| AluBI | AGCT | 2 cut(s) | 110, 206 |
| AluI | AGCT | 2 cut(s) | 110, 206 |
| ApoI | RAATTY | 1 cut(s) | 137 |
| BmiI | GGNNCC | 1 cut(s) | 53 |
| BmrI | ACTGGG | 1 cut(s) | 232 |
| BmuI | ACTGGG | 1 cut(s) | 232 |
| BpmI | CTGGAG | 1 cut(s) | 38 |
| Bse1I | ACTGG | 2 cut(s) | 55, 227 |
| BseGI | GGATG | 3 cut(s) | 163, 187, 223 |
| BseNI | ACTGG | 2 cut(s) | 55, 227 |
| BspLI | GGNNCC | 1 cut(s) | 53 |
| BsrI | ACTGG | 2 cut(s) | 55, 227 |
| BstF5I | GGATG | 3 cut(s) | 163, 187, 223 |
| BtsCI | GGATG | 3 cut(s) | 163, 187, 223 |
| CviJI | RGCY | 3 cut(s) | 52, 110, 206 |
| CviKI_1 | RGCY | 3 cut(s) | 52, 110, 206 |
| EcoRI | GAATTC | 1 cut(s) | 137 |
| FokI | GGATG | 3 cut(s) | 170, 194, 230 |
| GsuI | CTGGAG | 1 cut(s) | 38 |
| HindIII | AAGCTT | 1 cut(s) | 204 |
| HinfI | GANTC | 1 cut(s) | 34 |
| Hpy188I | TCNGA | 1 cut(s) | 242 |
| Hpy188III | TCNNGA | 1 cut(s) | 142 |
| LmnI | GCTCC | 1 cut(s) | 57 |
| LpnPI | CCDG | 3 cut(s) | 68, 127, 208 |
| MaeIII | GTNAC | 1 cut(s) | 229 |
| MboII | GAAGA | 1 cut(s) | 146 |
| MluCI | AATT | 1 cut(s) | 137 |
| MmeI | TCCRAC | 2 cut(s) | 132, 153 |
| MnlI | CCTC | 2 cut(s) | 48, 148 |
| MseI | TTAA | 1 cut(s) | 162 |
| NlaIV | GGNNCC | 1 cut(s) | 53 |
| PfeI | GAWTC | 1 cut(s) | 34 |
| PspN4I | GGNNCC | 1 cut(s) | 53 |
| SaqAI | TTAA | 1 cut(s) | 162 |
| SetI | ASST | 2 cut(s) | 112, 208 |
| SgeI | CNNG | 8 cut(s) | 25, 67, 107, 126, 138, 154, 201, 235 |
| Sse9I | AATT | 1 cut(s) | 137 |
| TaqI | TCGA | 1 cut(s) | 141 |
| TasI | AATT | 1 cut(s) | 137 |
| TfiI | GAWTC | 1 cut(s) | 34 |
| Tru1I | TTAA | 1 cut(s) | 162 |
| Tru9I | TTAA | 1 cut(s) | 162 |
| TspDTI | ATGAA | 3 cut(s) | 104, 198, 198 |
| XapI | RAATTY | 1 cut(s) | 137 |