Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'-phosphate (PLP), the active form of vitamin B6
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0454181 RchiOBHm_Chr6g0307821 |
| rosa_laevigata | RLG00000025477 |
| rosa_multiflora | Rmu_sc0002277.1_g000014 Rmu_sc0002277.1_g000015 Rmu_sc0004479.1_g000007 Rmu_sc0004483.1_g000001 Rmu_sc0006536.1_g000036 Rmu_ssc0000443.1_g000025 |
| rosa_roxburghii | Rroxscaffold_165G00436960 Rroxscaffold_1G00047680 Rroxscaffold_6G00425410 |
| rosa_rugosa | Rorug05G0188200 Rorug07G0270700 |
| rosa_samantha | Rh2AG431300 Rh2BG593100 Rh2CG156900 Rh2CG417200 Rh2DG449800 Rh3AG032900 Rh3AG158200 Rh3BG033100 Rh3BG182500 Rh3CG032000 Rh3CG173200 Rh3DG032900 Rh5BG425800 Rh5CG449900 Rh6AG432300 Rh7AG433200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 483 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 358 |
| Acc36I | ACCTGC | 1 cut(s) | 58 |
| AciI | CCGC | 2 cut(s) | 490, 833 |
| AclWI | GGATC | 2 cut(s) | 395, 563 |
| AcsI | RAATTY | 3 cut(s) | 9, 646, 946 |
| AcuI | CTGAAG | 1 cut(s) | 435 |
| AcyI | GRCGYC | 1 cut(s) | 578 |
| AdeI | CACNNNGTG | 1 cut(s) | 719 |
| AfaI | GTAC | 2 cut(s) | 372, 429 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 251, 587, 932 |
| AflII | CTTAAG | 1 cut(s) | 724 |
| AflIII | ACRYGT | 1 cut(s) | 465 |
| AgsI | TTSAA | 3 cut(s) | 278, 565, 922 |
| AjnI | CCWGG | 3 cut(s) | 571, 715, 966 |
| AluBI | AGCT | 3 cut(s) | 235, 593, 708 |
| AluI | AGCT | 3 cut(s) | 235, 593, 708 |
| Alw21I | GWGCWC | 1 cut(s) | 501 |
| Alw26I | GTCTC | 2 cut(s) | 24, 183 |
| AlwI | GGATC | 2 cut(s) | 395, 563 |
| Ama87I | CYCGRG | 1 cut(s) | 354 |
| AoxI | GGCC | 3 cut(s) | 487, 613, 961 |
| ApeKI | GCWGC | 3 cut(s) | 638, 769, 853 |
| ApoI | RAATTY | 3 cut(s) | 9, 646, 946 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 243, 275, 452, 484, 808, 840 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 912 |
| AspS9I | GGNCC | 4 cut(s) | 193, 487, 613, 816 |
| AvaI | CYCGRG | 1 cut(s) | 354 |
| AvaII | GGWCC | 2 cut(s) | 193, 816 |
| Bbv12I | GWGCWC | 1 cut(s) | 501 |
| BbvCI | CCTCAGC | 1 cut(s) | 134 |
| BbvI | GCAGC | 3 cut(s) | 625, 781, 865 |
| BccI | CCATC | 3 cut(s) | 32, 105, 926 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 57, 91 |
| BciT130I | CCWGG | 3 cut(s) | 573, 717, 968 |
| BciVI | GTATCC | 1 cut(s) | 13 |
| BclI | TGATCA | 2 cut(s) | 619, 757 |
| BcoDI | GTCTC | 2 cut(s) | 24, 183 |
| BfmI | CTRYAG | 1 cut(s) | 207 |
| BfrI | CTTAAG | 1 cut(s) | 724 |
| BfuAI | ACCTGC | 1 cut(s) | 58 |
| BfuI | GTATCC | 1 cut(s) | 13 |
| BisI | GCNGC | 4 cut(s) | 490, 639, 770, 854 |
| BlsI | GCNGC | 4 cut(s) | 491, 640, 771, 855 |
| Bme1390I | CCNGG | 3 cut(s) | 573, 717, 968 |
| Bme18I | GGWCC | 2 cut(s) | 193, 816 |
| BmeT110I | CYCGRG | 1 cut(s) | 354 |
| BmgT120I | GGNCC | 4 cut(s) | 193, 487, 613, 816 |
| BmiI | GGNNCC | 4 cut(s) | 95, 289, 837, 972 |
| BmrFI | CCNGG | 3 cut(s) | 573, 717, 968 |
| BmsI | GCATC | 1 cut(s) | 318 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 21, 53, 650, 682 |
| BpmI | CTGGAG | 2 cut(s) | 390, 950 |
| Bpu10I | CCTNAGC | 1 cut(s) | 134 |
| BsaHI | GRCGYC | 1 cut(s) | 578 |
| BsaJI | CCNNGG | 3 cut(s) | 189, 572, 926 |
| BsaWI | WCCGGW | 1 cut(s) | 900 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 251, 587, 932 |
| Bse1I | ACTGG | 2 cut(s) | 605, 872 |
| BseBI | CCWGG | 3 cut(s) | 573, 717, 968 |
| BseDI | CCNNGG | 3 cut(s) | 189, 572, 926 |
| BseGI | GGATG | 2 cut(s) | 937, 991 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 251, 587, 932 |
| BseMII | CTCAG | 4 cut(s) | 148, 178, 243, 681 |
| BseNI | ACTGG | 2 cut(s) | 605, 872 |
| BseXI | GCAGC | 3 cut(s) | 625, 781, 865 |
| BshFI | GGCC | 3 cut(s) | 489, 615, 963 |
| BsiHKAI | GWGCWC | 1 cut(s) | 501 |
| BsiHKCI | CYCGRG | 1 cut(s) | 354 |
| BsiSI | CCGG | 1 cut(s) | 901 |
| BslFI | GGGAC | 2 cut(s) | 589, 743 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 251, 587, 932 |
| BsmAI | GTCTC | 2 cut(s) | 24, 183 |
| BsmFI | GGGAC | 2 cut(s) | 589, 743 |
| BsnI | GGCC | 3 cut(s) | 489, 615, 963 |
| BsoBI | CYCGRG | 1 cut(s) | 354 |
| Bsp1286I | GDGCHC | 1 cut(s) | 501 |
| Bsp1407I | TGTACA | 1 cut(s) | 427 |
| Bsp143I | GATC | 4 cut(s) | 400, 568, 619, 757 |
| BspACI | CCGC | 2 cut(s) | 490, 833 |
| BspANI | GGCC | 3 cut(s) | 489, 615, 963 |
| BspCNI | CTCAG | 4 cut(s) | 147, 177, 242, 680 |
| BspLI | GGNNCC | 4 cut(s) | 95, 289, 837, 972 |
| BspMI | ACCTGC | 1 cut(s) | 58 |
| BspPI | GGATC | 2 cut(s) | 395, 563 |
| BspTI | CTTAAG | 1 cut(s) | 724 |
| BsrGI | TGTACA | 1 cut(s) | 427 |
| BsrI | ACTGG | 2 cut(s) | 605, 872 |
| BssECI | CCNNGG | 3 cut(s) | 189, 572, 926 |
| BssMI | GATC | 4 cut(s) | 400, 568, 619, 757 |
| BssNI | GRCGYC | 1 cut(s) | 578 |
| BssT1I | CCWWGG | 1 cut(s) | 189 |
| Bst2UI | CCWGG | 3 cut(s) | 573, 717, 968 |
| Bst4CI | ACNGT | 1 cut(s) | 734 |
| Bst6I | CTCTTC | 2 cut(s) | 188, 651 |
| BstACI | GRCGYC | 1 cut(s) | 578 |
| BstAFI | CTTAAG | 1 cut(s) | 724 |
| BstAUI | TGTACA | 1 cut(s) | 427 |
| BstDEI | CTNAG | 4 cut(s) | 134, 164, 229, 667 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 249 |
| BstF5I | GGATG | 2 cut(s) | 937, 991 |
| BstKTI | GATC | 4 cut(s) | 403, 571, 622, 760 |
| BstMAI | GTCTC | 2 cut(s) | 24, 183 |
| BstMBI | GATC | 4 cut(s) | 400, 568, 619, 757 |
| BstNI | CCWGG | 3 cut(s) | 573, 717, 968 |
| BstNSI | RCATGY | 1 cut(s) | 469 |
| BstSCI | CCNGG | 3 cut(s) | 571, 715, 966 |
| BstSFI | CTRYAG | 1 cut(s) | 207 |
| BstV1I | GCAGC | 3 cut(s) | 625, 781, 865 |
| BsuI | GTATCC | 1 cut(s) | 13 |
| BsuRI | GGCC | 3 cut(s) | 489, 615, 963 |
| BtgZI | GCGATG | 1 cut(s) | 270 |
| BtsCI | GGATG | 2 cut(s) | 937, 991 |
| BtsI | GCAGTG | 1 cut(s) | 499 |
| BtsIMutI | CAGTG | 4 cut(s) | 275, 499, 509, 598 |
| BveI | ACCTGC | 1 cut(s) | 58 |
| Cfr13I | GGNCC | 4 cut(s) | 193, 487, 613, 816 |
| CseI | GACGC | 1 cut(s) | 586 |
| CsiI | ACCWGGT | 1 cut(s) | 715 |
| Csp6I | GTAC | 2 cut(s) | 371, 428 |
| CviQI | GTAC | 2 cut(s) | 371, 428 |
| DdeI | CTNAG | 4 cut(s) | 134, 164, 229, 667 |
| DpnI | GATC | 4 cut(s) | 402, 570, 621, 759 |
| DpnII | GATC | 4 cut(s) | 400, 568, 619, 757 |
| DraI | TTTAAA | 1 cut(s) | 645 |
| DraIII | CACNNNGTG | 1 cut(s) | 719 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 358 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 358 |
| Eam1104I | CTCTTC | 2 cut(s) | 188, 651 |
| EarI | CTCTTC | 2 cut(s) | 188, 651 |
| Eco130I | CCWWGG | 1 cut(s) | 189 |
| Eco47I | GGWCC | 2 cut(s) | 193, 816 |
| Eco57I | CTGAAG | 1 cut(s) | 435 |
| Eco88I | CYCGRG | 1 cut(s) | 354 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 249 |
| EcoRII | CCWGG | 3 cut(s) | 571, 715, 966 |
| EcoT14I | CCWWGG | 1 cut(s) | 189 |
| ErhI | CCWWGG | 1 cut(s) | 189 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 167, 199 |
| FaqI | GGGAC | 2 cut(s) | 589, 743 |
| FbaI | TGATCA | 2 cut(s) | 619, 757 |
| Fnu4HI | GCNGC | 4 cut(s) | 490, 639, 770, 854 |
| FokI | GGATG | 2 cut(s) | 944, 998 |
| Fsp4HI | GCNGC | 4 cut(s) | 490, 639, 770, 854 |
| GluI | GCNGC | 4 cut(s) | 490, 639, 770, 854 |
| GsuI | CTGGAG | 2 cut(s) | 390, 950 |
| HaeIII | GGCC | 3 cut(s) | 489, 615, 963 |
| HapII | CCGG | 1 cut(s) | 901 |
| HgaI | GACGC | 1 cut(s) | 586 |
| Hin1I | GRCGYC | 1 cut(s) | 578 |
| HincII | GTYRAC | 1 cut(s) | 262 |
| HindII | GTYRAC | 1 cut(s) | 262 |
| HinfI | GANTC | 7 cut(s) | 274, 352, 359, 686, 698, 809, 1000 |
| HpaII | CCGG | 1 cut(s) | 901 |
| Hpy166II | GTNNAC | 2 cut(s) | 262, 598 |
| Hpy188I | TCNGA | 3 cut(s) | 29, 232, 927 |
| Hpy188III | TCNNGA | 3 cut(s) | 356, 407, 781 |
| Hpy8I | GTNNAC | 2 cut(s) | 262, 598 |
| HpyAV | CCTTC | 4 cut(s) | 357, 459, 799, 898 |
| HpyCH4III | ACNGT | 1 cut(s) | 734 |
| HpyCH4V | TGCA | 3 cut(s) | 309, 609, 853 |
| HpyF3I | CTNAG | 4 cut(s) | 134, 164, 229, 667 |
| Hsp92I | GRCGYC | 1 cut(s) | 578 |
| Ksp22I | TGATCA | 2 cut(s) | 619, 757 |
| Kzo9I | GATC | 4 cut(s) | 400, 568, 619, 757 |
| LmnI | GCTCC | 3 cut(s) | 99, 451, 590 |
| Lsp1109I | GCAGC | 3 cut(s) | 625, 781, 865 |
| LweI | GCATC | 1 cut(s) | 318 |
| MabI | ACCWGGT | 1 cut(s) | 715 |
| MaeIII | GTNAC | 3 cut(s) | 121, 222, 863 |
| MalI | GATC | 4 cut(s) | 402, 570, 621, 759 |
| MboI | GATC | 4 cut(s) | 400, 568, 619, 757 |
| MboII | GAAGA | 4 cut(s) | 175, 617, 668, 883 |
| MhlI | GDGCHC | 1 cut(s) | 501 |
| MluCI | AATT | 4 cut(s) | 9, 633, 646, 946 |
| MlyI | GAGTC | 4 cut(s) | 346, 368, 818, 1009 |
| MroXI | GAANNNNTTC | 1 cut(s) | 912 |
| MseI | TTAA | 4 cut(s) | 342, 474, 644, 725 |
| MslI | CAYNNNNRTG | 1 cut(s) | 753 |
| MspCI | CTTAAG | 1 cut(s) | 724 |
| MspI | CCGG | 1 cut(s) | 901 |
| MspR9I | CCNGG | 3 cut(s) | 573, 717, 968 |
| MvaI | CCWGG | 3 cut(s) | 573, 717, 968 |
| NdeII | GATC | 4 cut(s) | 400, 568, 619, 757 |
| NlaIV | GGNNCC | 4 cut(s) | 95, 289, 837, 972 |
| NspI | RCATGY | 1 cut(s) | 469 |
| PciI | ACATGT | 1 cut(s) | 465 |
| PdmI | GAANNNNTTC | 1 cut(s) | 912 |
| PfeI | GAWTC | 3 cut(s) | 274, 686, 698 |
| PkrI | GCNGC | 4 cut(s) | 491, 640, 771, 855 |
| PleI | GAGTC | 4 cut(s) | 346, 367, 817, 1008 |
| PpsI | GAGTC | 4 cut(s) | 346, 367, 817, 1008 |
| PscI | ACATGT | 1 cut(s) | 465 |
| PsiI | TTATAA | 1 cut(s) | 483 |
| Psp6I | CCWGG | 3 cut(s) | 571, 715, 966 |
| PspGI | CCWGG | 3 cut(s) | 571, 715, 966 |
| PspN4I | GGNNCC | 4 cut(s) | 95, 289, 837, 972 |
| PspPI | GGNCC | 4 cut(s) | 193, 487, 613, 816 |
| RsaI | GTAC | 2 cut(s) | 372, 429 |
| RsaNI | GTAC | 2 cut(s) | 371, 428 |
| RseI | CAYNNNNRTG | 1 cut(s) | 753 |
| SaqAI | TTAA | 4 cut(s) | 342, 474, 644, 725 |
| SatI | GCNGC | 4 cut(s) | 490, 639, 770, 854 |
| Sau3AI | GATC | 4 cut(s) | 400, 568, 619, 757 |
| Sau96I | GGNCC | 4 cut(s) | 193, 487, 613, 816 |
| SchI | GAGTC | 4 cut(s) | 346, 368, 818, 1009 |
| ScrFI | CCNGG | 3 cut(s) | 573, 717, 968 |
| SduI | GDGCHC | 1 cut(s) | 501 |
| SexAI | ACCWGGT | 1 cut(s) | 715 |
| SfaNI | GCATC | 1 cut(s) | 318 |
| SfcI | CTRYAG | 1 cut(s) | 207 |
| SinI | GGWCC | 2 cut(s) | 193, 816 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 753 |
| SmlI | CTYRAG | 1 cut(s) | 724 |
| SmoI | CTYRAG | 1 cut(s) | 724 |
| Sse9I | AATT | 4 cut(s) | 9, 633, 646, 946 |
| SsiI | CCGC | 2 cut(s) | 490, 833 |
| StyD4I | CCNGG | 3 cut(s) | 571, 715, 966 |
| StyI | CCWWGG | 1 cut(s) | 189 |
| TaaI | ACNGT | 1 cut(s) | 734 |
| TaqI | TCGA | 3 cut(s) | 43, 67, 350 |
| TasI | AATT | 4 cut(s) | 9, 633, 646, 946 |
| TatI | WGTACW | 1 cut(s) | 427 |
| TauI | GCSGC | 1 cut(s) | 492 |
| TfiI | GAWTC | 3 cut(s) | 274, 686, 698 |
| Tru1I | TTAA | 4 cut(s) | 342, 474, 644, 725 |
| Tru9I | TTAA | 4 cut(s) | 342, 474, 644, 725 |
| TscAI | CASTG | 4 cut(s) | 275, 499, 516, 605 |
| TseI | GCWGC | 3 cut(s) | 638, 769, 853 |
| TspDTI | ATGAA | 2 cut(s) | 123, 803 |
| TspGWI | ACGGA | 2 cut(s) | 603, 963 |
| TspRI | CASTG | 4 cut(s) | 275, 499, 516, 605 |
| Vha464I | CTTAAG | 1 cut(s) | 724 |
| VpaK11BI | GGWCC | 2 cut(s) | 193, 816 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 249 |
| XapI | RAATTY | 3 cut(s) | 9, 646, 946 |
| XceI | RCATGY | 1 cut(s) | 469 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 864, 886 |
| XmnI | GAANNNNTTC | 1 cut(s) | 912 |