RchiOBHm_Chr6g0312281

Ribosomal RNA small subunit methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0010420
Physical Location & Seq
Forward (+)
68941682 .. 68944163
2482 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28091

Sequence Viewer

Length: 1272 bp
ATGGCAACAGCAGCTTCACTGTCGACTCCAGCATCAAGAATCTTCTCTCTCTCTTCCTTATCACTCCGCCTCCGAGGCCTCACATCCGCCGCCCACAGTCTCAGTCGGAGCACCACGACTAGTAAGAAGAAGAAGCAGCAGCAGCAGAAGCAGAAGCACAGAGTCGCCGTCAAAGAAAAGAGAAGAACTCGCTCCGATCGAGAGTTCGACATCAACCGTTATGGAGACTCCGCTTTCCACATCCCAGTCTTACTCGGCGAAGTCATCGACGTTTTCCCGCCCTCCAAACCTCTCCGGCGTTTCGTCGACTGCACCGTCGGAGCTGCCGGCCACTCTTCCGCGATAATTGAAGGGCACCCTGAAATGCAAGTGTATGTGGGACTTGATGTTGATCCTGTGGCGCTTGACAAGGCTCGAGCTCGGATCAATTCTGCGTTGAACGACCCAAGTTCGACCCTGAAAGCTTATACATTTTTGGAGAATTTTAGATACATCAAGTCTTTGCTTACTGACGTGGATGAGACACTCCTTGACACCGGAATTGATGGCATTCTGATGGATTTAGGAATGTCGTCGATGCAGGTGAATGATCCTCAGAGAGGCTTCAGTGTGCTTGCTAATGGGCCTCTTGATATGCGCATGGATCCTCAGGCAAGTCTGAAAGCAGAAGACATTTTAAACTCTTGGCCAGAAACTGAGGTGGGGCGCATCCTGCGAGACTATGGGGAAGAAAGCAATTGGTACTCTCTTCAAAACAAAATAGTTAAAGCACGCTTACAAGGTGGATTGCATTCCACTGGTGAACTAGTAGATCTTATAAAATCTGCAACTCCTCTAAGTCGAGAAGGGAGGCAAGGTTGGATTAAGACAGCAACAAGGGTGTTTCAAGCTCTGAGGATAGCAGTTAACGATGAGTTGAAGACTCTGGAGGATTCTCTTTATTCATGTTTTGACTGCCTGGCACCTGGTGGTAGGCTAGCAGTCATCTCTTTCCACAGTTTGGAGGACAGAATTGTGAAACAAACATTTCTTGACATCATCAACATCAAAGGCGGAGATGGGGACGCTTACATGATTGAAGAAAGAGAGCGGAAGCAAGATTTGAGAAAGATCAGAATAGACATTGATAAAGACGAAATGTGGGTCAAACAAATGTTACAGGGCTTGAGAGGAACAATTCTCACTAAGAGACCAATTACGCCATCTGAAGAGGAAGAGAAACTGAACACCCGGTGTAGGAGTGCCAAGCTTAGGGTGATTCAGAAGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_5

Protein Analysis

423

Amino Acids

47.47

Weight (kDa)

9.07

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_5 PF01795 78 - 422 6.9e-85 MraW methylase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 818
AarI CACCTGC 1 cut(s) 571
AasI GACNNNNNNGTC 1 cut(s) 314
Acc16I TGCGCA 1 cut(s) 638
Acc36I ACCTGC 1 cut(s) 571
AccB1I GGYRCC 2 cut(s) 354, 961
AccB7I CCANNNNNTGG 1 cut(s) 1000
AccBSI CCGCTC 1 cut(s) 1090
AccI GTMKAC 2 cut(s) 23, 306
AccII CGCG 1 cut(s) 341
AciI CCGC 8 cut(s) 67, 87, 90, 231, 278, 339, 1053, 1090
AclWI GGATC 5 cut(s) 386, 431, 584, 638, 651
AcoI YGGCCR 2 cut(s) 328, 686
AcsI RAATTY 1 cut(s) 481
AcuI CTGAAG 2 cut(s) 589, 1227
AdeI CACNNNGTG 2 cut(s) 968, 1233
AfaI GTAC 1 cut(s) 743
AfiI CCNNNNNNNGG 4 cut(s) 599, 1000, 1236, 1251
AgsI TTSAA 6 cut(s) 350, 439, 752, 887, 919, 1079
AhlI ACTAGT 2 cut(s) 119, 805
AjiI CACGTC 1 cut(s) 514
AjnI CCWGG 2 cut(s) 957, 964
AluBI AGCT 6 cut(s) 14, 323, 419, 464, 890, 1249
AluI AGCT 6 cut(s) 14, 323, 419, 464, 890, 1249
Alw21I GWGCWC 2 cut(s) 113, 421
Alw26I GTCTC 5 cut(s) 104, 219, 515, 711, 1183
AlwI GGATC 5 cut(s) 386, 431, 584, 638, 651
AlwNI CAGNNNCTG 1 cut(s) 695
Ama87I CYCGRG 1 cut(s) 414
AoxI GGCC 4 cut(s) 76, 328, 623, 686
ApeKI GCWGC 5 cut(s) 11, 136, 139, 142, 323
ApoI RAATTY 1 cut(s) 481
ArsI GACNNNNNNTTYG 2 cut(s) 1128, 1160
AspLEI GCGC 3 cut(s) 403, 639, 708
AspS9I GGNCC 1 cut(s) 623
AsuC2I CCSGG 1 cut(s) 1231
AsuHPI GGTGA 3 cut(s) 595, 812, 1267
AsuNHI GCTAGC 1 cut(s) 976
AvaI CYCGRG 1 cut(s) 414
AxyI CCTNAGG 1 cut(s) 648
BaeGI GKGCMC 1 cut(s) 357
BalI TGGCCA 1 cut(s) 688
BamHI GGATCC 1 cut(s) 643
BanI GGYRCC 2 cut(s) 354, 961
BanII GRGCYC 1 cut(s) 421
BbsI GAAGAC 2 cut(s) 675, 926
Bbv12I GWGCWC 2 cut(s) 113, 421
BbvI GCAGC 5 cut(s) 23, 148, 151, 154, 310
BccI CCATC 4 cut(s) 539, 550, 1052, 1210
BceAI ACGGC 1 cut(s) 152
BciT130I CCWGG 2 cut(s) 959, 966
BcnI CCSGG 1 cut(s) 1231
BcoDI GTCTC 5 cut(s) 104, 219, 515, 711, 1183
BcuI ACTAGT 2 cut(s) 119, 805
BfaI CTAG 3 cut(s) 120, 806, 977
BfoI RGCGCY 1 cut(s) 404
BfuAI ACCTGC 1 cut(s) 571
BglI GCCNNNNNGGC 1 cut(s) 75
BglII AGATCT 1 cut(s) 811
BisI GCNGC 6 cut(s) 12, 90, 137, 140, 143, 324
BlsI GCNGC 6 cut(s) 13, 91, 138, 141, 144, 325
Bme1390I CCNGG 3 cut(s) 959, 966, 1231
BmeT110I CYCGRG 1 cut(s) 414
BmgBI CACGTC 1 cut(s) 514
BmgT120I GGNCC 1 cut(s) 623
BmiI GGNNCC 3 cut(s) 356, 645, 963
BmrFI CCNGG 3 cut(s) 959, 966, 1231
BmrI ACTGGG 1 cut(s) 239
BmsI GCATC 3 cut(s) 41, 567, 717
BmtI GCTAGC 1 cut(s) 980
BmuI ACTGGG 1 cut(s) 239
BpiI GAAGAC 2 cut(s) 675, 926
BplI GAGNNNNNCTC 2 cut(s) 172, 204
BpmI CTGGAG 2 cut(s) 12, 947
Bpu10I CCTNAGC 1 cut(s) 1250
BpuEI CTTGAG 1 cut(s) 1186
BpuMI CCSGG 1 cut(s) 1231
BsaBI GATNNNNATC 1 cut(s) 390
BsaI GGTCTC 1 cut(s) 1183
BsaJI CCNNGG 1 cut(s) 73
BsaWI WCCGGW 1 cut(s) 536
BsaXI ACNNNNNCTCC 4 cut(s) 54, 84, 841, 871
Bsc4I CCNNNNNNNGG 4 cut(s) 599, 1000, 1236, 1251
Bse118I RCCGGY 1 cut(s) 326
Bse1I ACTGG 2 cut(s) 245, 802
Bse21I CCTNAGG 1 cut(s) 648
Bse8I GATNNNNATC 1 cut(s) 390
BseBI CCWGG 2 cut(s) 959, 966
BseDI CCNNGG 1 cut(s) 73
BseGI GGATG 4 cut(s) 83, 240, 523, 708
BseJI GATNNNNATC 1 cut(s) 390
BseLI CCNNNNNNNGG 4 cut(s) 599, 1000, 1236, 1251
BseMII CTCAG 5 cut(s) 115, 608, 662, 687, 884
BseNI ACTGG 2 cut(s) 245, 802
BseRI GAGGAG 1 cut(s) 822
BseSI GKGCMC 1 cut(s) 357
BseXI GCAGC 5 cut(s) 23, 148, 151, 154, 310
BsgI GTGCAG 1 cut(s) 295
Bsh1236I CGCG 1 cut(s) 341
Bsh1285I CGRYCG 1 cut(s) 199
BshFI GGCC 4 cut(s) 78, 330, 625, 688
BshNI GGYRCC 2 cut(s) 354, 961
BsiEI CGRYCG 1 cut(s) 199
BsiHKAI GWGCWC 2 cut(s) 113, 421
BsiHKCI CYCGRG 1 cut(s) 414
BsiSI CCGG 4 cut(s) 295, 327, 537, 1231
BslFI GGGAC 2 cut(s) 393, 1076
BslI CCNNNNNNNGG 4 cut(s) 599, 1000, 1236, 1251
BsmAI GTCTC 5 cut(s) 104, 219, 515, 711, 1183
BsmFI GGGAC 2 cut(s) 393, 1076
BsmI GAATGC 2 cut(s) 549, 790
BsnI GGCC 4 cut(s) 78, 330, 625, 688
Bso31I GGTCTC 1 cut(s) 1183
BsoBI CYCGRG 1 cut(s) 414
Bsp1286I GDGCHC 3 cut(s) 113, 357, 421
Bsp143I GATC 7 cut(s) 196, 391, 423, 589, 643, 811, 1110
BspACI CCGC 8 cut(s) 67, 87, 90, 231, 278, 339, 1053, 1090
BspANI GGCC 4 cut(s) 78, 330, 625, 688
BspCNI CTCAG 5 cut(s) 114, 607, 661, 688, 885
BspFNI CGCG 1 cut(s) 341
BspLI GGNNCC 3 cut(s) 356, 645, 963
BspMI ACCTGC 1 cut(s) 571
BspOI GCTAGC 1 cut(s) 980
BspPI GGATC 5 cut(s) 386, 431, 584, 638, 651
BspT107I GGYRCC 2 cut(s) 354, 961
BspTNI GGTCTC 1 cut(s) 1183
BsrBI CCGCTC 1 cut(s) 1090
BsrFI RCCGGY 1 cut(s) 326
BsrI ACTGG 2 cut(s) 245, 802
BssAI RCCGGY 1 cut(s) 326
BssECI CCNNGG 1 cut(s) 73
BssMI GATC 7 cut(s) 196, 391, 423, 589, 643, 811, 1110
Bst2UI CCWGG 2 cut(s) 959, 966
Bst4CI ACNGT 5 cut(s) 21, 98, 218, 316, 998
Bst6I CTCTTC 5 cut(s) 58, 340, 753, 1203, 1209
BstC8I GCNNGC 4 cut(s) 328, 615, 772, 978
BstDEI CTNAG 8 cut(s) 101, 594, 648, 696, 836, 893, 1185, 1250
BstENI CCTNNNNNAGG 1 cut(s) 597
BstF5I GGATG 4 cut(s) 83, 240, 523, 708
BstFNI CGCG 1 cut(s) 341
BstH2I RGCGCY 1 cut(s) 404
BstHHI GCGC 3 cut(s) 403, 639, 708
BstKTI GATC 7 cut(s) 199, 394, 426, 592, 646, 814, 1113
BstMAI GTCTC 5 cut(s) 104, 219, 515, 711, 1183
BstMBI GATC 7 cut(s) 196, 391, 423, 589, 643, 811, 1110
BstMCI CGRYCG 1 cut(s) 199
BstMWI GCNNNNNNNGC 5 cut(s) 11, 75, 142, 148, 712
BstNI CCWGG 2 cut(s) 959, 966
BstSCI CCNGG 3 cut(s) 957, 964, 1229
BstSLI GKGCMC 1 cut(s) 357
BstUI CGCG 1 cut(s) 341
BstV1I GCAGC 5 cut(s) 23, 148, 151, 154, 310
BstV2I GAAGAC 2 cut(s) 675, 926
BstX2I RGATCY 2 cut(s) 643, 811
BstYI RGATCY 2 cut(s) 643, 811
Bsu36I CCTNAGG 1 cut(s) 648
BsuRI GGCC 4 cut(s) 78, 330, 625, 688
BtrI CACGTC 1 cut(s) 514
BtsCI GGATG 4 cut(s) 83, 240, 523, 708
BtsIMutI CAGTG 3 cut(s) 17, 613, 795
BveI ACCTGC 1 cut(s) 571
Cac8I GCNNGC 4 cut(s) 328, 615, 772, 978
CaiI CAGNNNCTG 1 cut(s) 695
CfoI GCGC 3 cut(s) 403, 639, 708
Cfr10I RCCGGY 1 cut(s) 326
Cfr13I GGNCC 1 cut(s) 623
CseI GACGC 1 cut(s) 1073
CsiI ACCWGGT 1 cut(s) 964
Csp6I GTAC 1 cut(s) 742
CviAII CATG 3 cut(s) 640, 945, 1072
CviQI GTAC 1 cut(s) 742
DdeI CTNAG 8 cut(s) 101, 594, 648, 696, 836, 893, 1185, 1250
DpnI GATC 7 cut(s) 198, 393, 425, 591, 645, 813, 1112
DpnII GATC 7 cut(s) 196, 391, 423, 589, 643, 811, 1110
DraI TTTAAA 1 cut(s) 678
DraIII CACNNNGTG 2 cut(s) 968, 1233
DrdI GACNNNNNNGTC 1 cut(s) 314
DseDI GACNNNNNNGTC 1 cut(s) 314
EaeI YGGCCR 2 cut(s) 328, 686
Eam1104I CTCTTC 5 cut(s) 58, 340, 753, 1203, 1209
EarI CTCTTC 5 cut(s) 58, 340, 753, 1203, 1209
EciI GGCGGA 3 cut(s) 56, 76, 1068
Ecl136II GAGCTC 1 cut(s) 419
Eco147I AGGCCT 1 cut(s) 78
Eco24I GRGCYC 1 cut(s) 421
Eco31I GGTCTC 1 cut(s) 1183
Eco53kI GAGCTC 1 cut(s) 419
Eco57I CTGAAG 2 cut(s) 589, 1227
Eco81I CCTNAGG 1 cut(s) 648
Eco88I CYCGRG 1 cut(s) 414
EcoICRI GAGCTC 1 cut(s) 419
EcoNI CCTNNNNNAGG 1 cut(s) 597
EcoRII CCWGG 2 cut(s) 957, 964
EcoT38I GRGCYC 1 cut(s) 421
FaeI CATG 3 cut(s) 643, 948, 1075
FaiI YATR 9 cut(s) 222, 375, 468, 635, 641, 723, 818, 946, 1073
FaqI GGGAC 2 cut(s) 393, 1076
FatI CATG 3 cut(s) 639, 944, 1071
FauI CCCGC 1 cut(s) 285
FblI GTMKAC 2 cut(s) 23, 306
Fnu4HI GCNGC 6 cut(s) 12, 90, 137, 140, 143, 324
FokI GGATG 4 cut(s) 70, 227, 530, 695
FriOI GRGCYC 1 cut(s) 421
Fsp4HI GCNGC 6 cut(s) 12, 90, 137, 140, 143, 324
FspAI RTGCGCAY 1 cut(s) 638
FspBI CTAG 3 cut(s) 120, 806, 977
FspI TGCGCA 1 cut(s) 638
GlaI GCGC 3 cut(s) 402, 638, 707
GluI GCNGC 6 cut(s) 12, 90, 137, 140, 143, 324
GsuI CTGGAG 2 cut(s) 12, 947
HaeII RGCGCY 1 cut(s) 404
HaeIII GGCC 4 cut(s) 78, 330, 625, 688
HapII CCGG 4 cut(s) 295, 327, 537, 1231
HgaI GACGC 1 cut(s) 1073
HhaI GCGC 3 cut(s) 403, 639, 708
Hin1II CATG 3 cut(s) 643, 948, 1075
Hin6I GCGC 3 cut(s) 401, 637, 706
HinP1I GCGC 3 cut(s) 401, 637, 706
HincII GTYRAC 3 cut(s) 24, 307, 907
HindII GTYRAC 3 cut(s) 24, 307, 907
HindIII AAGCTT 2 cut(s) 462, 1247
HinfI GANTC 7 cut(s) 25, 39, 162, 227, 922, 932, 1258
HpaI GTTAAC 1 cut(s) 907
HpaII CCGG 4 cut(s) 295, 327, 537, 1231
HphI GGTGA 3 cut(s) 595, 812, 1267
Hpy166II GTNNAC 4 cut(s) 24, 307, 803, 907
Hpy188III TCNNGA 6 cut(s) 36, 200, 629, 842, 926, 1031
Hpy8I GTNNAC 4 cut(s) 24, 307, 803, 907
Hpy99I CGWCG 4 cut(s) 272, 308, 320, 577
HpyAV CCTTC 3 cut(s) 344, 839, 1258
HpyCH4III ACNGT 5 cut(s) 21, 98, 218, 316, 998
HpyCH4IV ACGT 2 cut(s) 270, 513
HpyCH4V TGCA 5 cut(s) 312, 367, 580, 790, 827
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 75, 142, 148, 712
HpyF3I CTNAG 8 cut(s) 101, 594, 648, 696, 836, 893, 1185, 1250
HpySE526I ACGT 2 cut(s) 270, 513
Hsp92II CATG 3 cut(s) 643, 948, 1075
HspAI GCGC 3 cut(s) 401, 637, 706
KroI GCCGGC 1 cut(s) 326
KroNI GCCGGC 1 cut(s) 328
KspAI GTTAAC 1 cut(s) 907
Kzo9I GATC 7 cut(s) 196, 391, 423, 589, 643, 811, 1110
LmnI GCTCC 3 cut(s) 108, 197, 320
Lsp1109I GCAGC 5 cut(s) 23, 148, 151, 154, 310
LweI GCATC 3 cut(s) 41, 567, 717
MabI ACCWGGT 1 cut(s) 964
MaeI CTAG 3 cut(s) 120, 806, 977
MaeII ACGT 2 cut(s) 270, 513
MaeIII GTNAC 1 cut(s) 1155
MalI GATC 7 cut(s) 198, 393, 425, 591, 645, 813, 1112
MbiI CCGCTC 1 cut(s) 1090
MboI GATC 7 cut(s) 196, 391, 423, 589, 643, 811, 1110
MfeI CAATTG 1 cut(s) 736
MflI RGATCY 2 cut(s) 643, 811
MhlI GDGCHC 3 cut(s) 113, 357, 421
MlsI TGGCCA 1 cut(s) 688
MluCI AATT 8 cut(s) 345, 427, 481, 540, 736, 1011, 1176, 1194
MluNI TGGCCA 1 cut(s) 688
MlyI GAGTC 4 cut(s) 19, 171, 221, 916
MmeI TCCRAC 3 cut(s) 86, 298, 839
Mox20I TGGCCA 1 cut(s) 688
MroNI GCCGGC 1 cut(s) 326
MscI TGGCCA 1 cut(s) 688
MseI TTAA 5 cut(s) 677, 765, 864, 906, 1270
MslI CAYNNNNRTG 1 cut(s) 554
Msp20I TGGCCA 1 cut(s) 688
MspI CCGG 4 cut(s) 295, 327, 537, 1231
MspR9I CCNGG 3 cut(s) 959, 966, 1231
MunI CAATTG 1 cut(s) 736
Mva1269I GAATGC 2 cut(s) 549, 790
MvaI CCWGG 2 cut(s) 959, 966
MvnI CGCG 1 cut(s) 341
MwoI GCNNNNNNNGC 5 cut(s) 11, 75, 142, 148, 712
NaeI GCCGGC 1 cut(s) 328
NciI CCSGG 1 cut(s) 1231
NdeII GATC 7 cut(s) 196, 391, 423, 589, 643, 811, 1110
NgoMIV GCCGGC 1 cut(s) 326
NheI GCTAGC 1 cut(s) 976
NlaIII CATG 3 cut(s) 643, 948, 1075
NlaIV GGNNCC 3 cut(s) 356, 645, 963
NmeAIII GCCGAG 1 cut(s) 234
NsbI TGCGCA 1 cut(s) 638
PaeR7I CTCGAG 1 cut(s) 414
PaqCI CACCTGC 1 cut(s) 571
PceI AGGCCT 1 cut(s) 78
PcsI WCGNNNNNNNCGW 2 cut(s) 196, 312
PctI GAATGC 2 cut(s) 549, 790
PdiI GCCGGC 1 cut(s) 328
PfeI GAWTC 3 cut(s) 39, 932, 1258
PflMI CCANNNNNTGG 1 cut(s) 1000
PkrI GCNGC 6 cut(s) 13, 91, 138, 141, 144, 325
Ple19I CGATCG 1 cut(s) 199
PleI GAGTC 4 cut(s) 19, 170, 221, 916
PpsI GAGTC 4 cut(s) 19, 170, 221, 916
PsiI TTATAA 1 cut(s) 818
Psp124BI GAGCTC 1 cut(s) 421
Psp6I CCWGG 2 cut(s) 957, 964
PspGI CCWGG 2 cut(s) 957, 964
PspN4I GGNNCC 3 cut(s) 356, 645, 963
PspPI GGNCC 1 cut(s) 623
PspXI VCTCGAGB 1 cut(s) 414
PstNI CAGNNNCTG 1 cut(s) 695
PsuI RGATCY 2 cut(s) 643, 811
PvuI CGATCG 1 cut(s) 199
RsaI GTAC 1 cut(s) 743
RsaNI GTAC 1 cut(s) 742
RseI CAYNNNNRTG 1 cut(s) 554
SacI GAGCTC 1 cut(s) 421
SalI GTCGAC 2 cut(s) 22, 305
SaqAI TTAA 5 cut(s) 677, 765, 864, 906, 1270
SatI GCNGC 6 cut(s) 12, 90, 137, 140, 143, 324
Sau3AI GATC 7 cut(s) 196, 391, 423, 589, 643, 811, 1110
Sau96I GGNCC 1 cut(s) 623
SchI GAGTC 4 cut(s) 19, 171, 221, 916
ScrFI CCNGG 3 cut(s) 959, 966, 1231
SduI GDGCHC 3 cut(s) 113, 357, 421
SexAI ACCWGGT 1 cut(s) 964
SfaNI GCATC 3 cut(s) 41, 567, 717
Sfr274I CTCGAG 1 cut(s) 414
SlaI CTCGAG 1 cut(s) 414
SmiMI CAYNNNNRTG 1 cut(s) 554
SmlI CTYRAG 2 cut(s) 414, 1165
SmoI CTYRAG 2 cut(s) 414, 1165
SpeI ACTAGT 2 cut(s) 119, 805
Sse9I AATT 8 cut(s) 345, 427, 481, 540, 736, 1011, 1176, 1194
SseBI AGGCCT 1 cut(s) 78
SsiI CCGC 8 cut(s) 67, 87, 90, 231, 278, 339, 1053, 1090
SspMI CTAG 3 cut(s) 120, 806, 977
SstI GAGCTC 1 cut(s) 421
StuI AGGCCT 1 cut(s) 78
StyD4I CCNGG 3 cut(s) 957, 964, 1229
TaaI ACNGT 5 cut(s) 21, 98, 218, 316, 998
TaiI ACGT 2 cut(s) 273, 516
TaqI TCGA 9 cut(s) 23, 199, 207, 267, 306, 415, 452, 575, 841
TasI AATT 8 cut(s) 345, 427, 481, 540, 736, 1011, 1176, 1194
TauI GCSGC 1 cut(s) 92
TfiI GAWTC 3 cut(s) 39, 932, 1258
Tru1I TTAA 5 cut(s) 677, 765, 864, 906, 1270
Tru9I TTAA 5 cut(s) 677, 765, 864, 906, 1270
TscAI CASTG 3 cut(s) 24, 613, 802
TseI GCWGC 5 cut(s) 11, 136, 139, 142, 323
TspDTI ATGAA 1 cut(s) 933
TspRI CASTG 3 cut(s) 24, 613, 802
Van91I CCANNNNNTGG 1 cut(s) 1000
XagI CCTNNNNNAGG 1 cut(s) 597
XapI RAATTY 1 cut(s) 481
XhoI CTCGAG 1 cut(s) 414
XmiI GTMKAC 2 cut(s) 23, 306
XspI CTAG 3 cut(s) 120, 806, 977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.