Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010305

Physical Location & Seq

Genomic Coordinates Reverse (-)

23015552 .. 23022876

Gene Structure 7325 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18374

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGCTGTTTCCGGCCAGACGCCCGATATCATGGGCGACCGTCAGTACGGTCAGGACGTTCGCACTCAAAATGTGGTGGCCTGTCAAGCTATTGCCAATGTCGTCAAATCTTCACTTGGCCCTGTTGGTCTCGACAAGATGCTTGTCGATGATATTGGTGACGTGACTATTACAAATGATGGAGCTACCATACTCAAGATGCTAGAAGTCGAGCATCCTGCTGCCAAGGTACTTGTGGATCTGGCTGAGCTTCAAGACAAAGAAGTTGGAGATGGGACGACATCAGTTGTCATTCTTGCTGCAGAGTTGTTAAAGCGAGCAAATGATCTAGTGAAGCACAAAATTCACCCAACATCCATTATCAGTGGTTACAGGCTTGCTATGAGGGAAGCGTGCAAATATGTTGAGGAAAAGCTAGCTGTGAAGGTTGAAAAGCTCGGAAAAGATTGCCTAGTAAATTGTGCAAAAACAAGCATGTCCTCGAAGTTGATATCTGGTGACAGTGATTTCTTTGCAAATTTGGTTGTAGATGCTGTACAAGCTGTAAAGATGACCAATGCTCGGGGGGACATCAAGTACCCAATCAAGGGGATCAATATTTTGAAAGCTCATGGAAAAAGTGCAAGAGAAAGTTATCTCTTGAATGGATATGCACTAAATACAGGCCGTGCTGCACAAGGAATGCCACTTAAAGTCTCCCCTGCAAGGATTGCTTGCCTTGACTTGAATCTTCAGAAGACAAAAATGCAAATGGGTGTCCAAGTTTTAGTTAGCGACCCTAGGGAGCTTGAAAAAATCCGCCAAAGAGAAGCGGATATGACGAAAGAACGTATAGAGAAACTTCTTAAAGCTGGAGCAAATGTTATTCTGACTACAAAAGGGATTGATGATATGGCACTCAAGGCAAGATTCCTTTGTGGAATCCCTGCTGCTCTCTACCTGTTTAAGCCTTTTGGCGATGTGTGGGTCACTTTCTATTTTGGTCTAGTTCTTCCTTATGTGATGCTACAGTATTTTGTGGAGGCTGGGGCTATCGCTGTAAGACGTGTTCAGAAAGAAGATATGCGCCATGTTGCCAAGGCTACGGGTGCAACAATGGTATCAACTTTCGCTGATATGGAAGGAGAGGAAACATTTGATTCTTCACTTCTTGGATCTGCAGATGAAGTTGTAGAGGAGCGCGTTTCTGATGATGATGTAATTTTGATAAAAGGGACCAAAACTAATAGTGCGGTCTCCTTGATCCTTAGAGGTGCAAATGATTACATGCTTGACGAGATGGAGAGAGCTCTTCATGATGCTCTATCTATTGTCAAGAGGACTCTAGAATCGAACACGGTGGTACCTGGTGGAGGTGCAGTTGAGACTGCCTTGTGTGAGTATTTGGAGTGCTTTGCTATAACACTAGGATCCCGTGAACAGTTGGCAATTGCAGAGTTTGCTGAATCTTTGACAATCATACCAAAGGTGCTAGCTGTCAATGCTGCCAAGGACTCTACAGACTTGGTTGCAAAGATGAGGTCCTACCACCACAAGGCACAAGCTCCGGGTGACAGGAGGCAGCAGTCGCATTGCAACTGGGGTTTGGATCTTGTAAAAGGAGTAGTAGTTAATAATTTAGAGGCTGGAGTCATTGAGCCTGCAATGAGCAAAATAAAGATGATTCAGTTTGCAACAGAAGCGGCCATCACGATTCTCCGAATTGATGACATGATCAGGCTAGTCAAAGATGAAAGTCAGGGTGAGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005832 GO:0006457 GO:0006458 GO:0008150 GO:0009987 GO:0032991 GO:0044183 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0051082 GO:0061077 GO:0101031

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

583

Amino Acids

63.56

Weight (kDa)

5.78

Isoelectric Point (pI)

34.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	31 - 310	3.6e-88	TCP-1/cpn60 chaperonin family
Cpn60_TCP1	PF00118	335 - 573	1.3e-67	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20050
fragaria_vesca	FvH4_5g20270
malus_domestica	MD04G1052300.v1.1 MD06G1047900.v1.1
prunus_persica	Prupe.5G058100_v2.0.a1
pyrus_communis	pycom04g04600 pycom06g04080 pycom06g04090
rosa_chinensis	RchiOBHm_Chr7g0205331
rosa_laevigata	RLG00000003387
rosa_multiflora	Rmu_sc0009317.1_g000004 Rmu_sc0009725.1_g000010 Rmu_ssc0000004.1_g000023
rosa_roxburghii	Rroxscaffold_3G00252460
rosa_rugosa	Rorug07G0089800
rosa_samantha	Rh7AG220500 Rh7BG216600 Rh7CG233400 Rh7CG233500 Rh7DG227400
rosa_wichuraiana	Rw7G019060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1342
AccB1I	GGYRCC	1 cut(s)	1342
AccII	CGCG	1 cut(s)	1182
AciI	CCGC	4 cut(s)	799, 812, 1232, 1682
AclWI	GGATC	7 cut(s)	246, 599, 1162, 1237, 1404, 1417, 1596
AcoI	YGGCCR	2 cut(s)	13, 1683
AcsI	RAATTY	2 cut(s)	342, 517
AcuI	CTGAAG	1 cut(s)	716
AcyI	GRCGYC	1 cut(s)	20
AfaI	GTAC	5 cut(s)	47, 231, 537, 578, 1344
AfiI	CCNNNNNNNGG	6 cut(s)	561, 586, 587, 705, 1352, 1534
AflIII	ACRYGT	1 cut(s)	1045
AgsI	TTSAA	6 cut(s)	254, 431, 604, 643, 727, 791
AjiI	CACGTC	2 cut(s)	163, 1046
AjnI	CCWGG	1 cut(s)	1345
Alw21I	GWGCWC	1 cut(s)	1291
Alw26I	GTCTC	4 cut(s)	134, 700, 1240, 1358
AlwI	GGATC	7 cut(s)	246, 599, 1162, 1237, 1404, 1417, 1596
Ama87I	CYCGRG	1 cut(s)	561
AoxI	GGCC	5 cut(s)	13, 78, 118, 664, 1683
ApeKI	GCWGC	6 cut(s)	221, 299, 671, 929, 1484, 1561
ApoI	RAATTY	2 cut(s)	342, 517
ArsI	GACNNNNNNTTYG	2 cut(s)	1505, 1537
Asp718I	GGTACC	1 cut(s)	1342
AspA2I	CCTAGG	1 cut(s)	779
AspLEI	GCGC	2 cut(s)	1068, 1182
AspS9I	GGNCC	3 cut(s)	119, 1215, 1521
AsuC2I	CCSGG	1 cut(s)	1548
AsuHPI	GGTGA	4 cut(s)	170, 338, 509, 1562
AsuNHI	GCTAGC	2 cut(s)	415, 1471
AvaI	CYCGRG	1 cut(s)	561
AvaII	GGWCC	2 cut(s)	1215, 1521
AvrII	CCTAGG	1 cut(s)	779
BaeI	ACNNNNGTAYC	4 cut(s)	1083, 1116, 1326, 1359
BamHI	GGATCC	1 cut(s)	1409
BanI	GGYRCC	1 cut(s)	1342
BanII	GRGCYC	1 cut(s)	1291
BbsI	GAAGAC	1 cut(s)	743
Bbv12I	GWGCWC	1 cut(s)	1291
BbvI	GCAGC	6 cut(s)	208, 286, 658, 916, 1471, 1573
BccI	CCATC	4 cut(s)	173, 266, 1273, 1694
BceAI	ACGGC	1 cut(s)	651
BcgI	CGANNNNNNTGC	2 cut(s)	200, 234
BciT130I	CCWGG	1 cut(s)	1347
BclI	TGATCA	1 cut(s)	1713
BcnI	CCSGG	1 cut(s)	1548
BcoDI	GTCTC	4 cut(s)	134, 700, 1240, 1358
BfmI	CTRYAG	4 cut(s)	300, 1007, 1158, 1497
BisI	GCNGC	7 cut(s)	222, 300, 672, 930, 1485, 1562, 1683
BlnI	CCTAGG	1 cut(s)	779
BlpI	GCTNAGC	1 cut(s)	246
BlsI	GCNGC	7 cut(s)	223, 301, 673, 931, 1486, 1563, 1684
Bme1390I	CCNGG	2 cut(s)	1347, 1548
Bme18I	GGWCC	2 cut(s)	1215, 1521
BmeT110I	CYCGRG	1 cut(s)	561
BmgBI	CACGTC	2 cut(s)	163, 1046
BmgT120I	GGNCC	3 cut(s)	119, 1215, 1521
BmiI	GGNNCC	3 cut(s)	1216, 1344, 1411
BmrFI	CCNGG	2 cut(s)	1347, 1548
BmrI	ACTGGG	1 cut(s)	1588
BmsI	GCATC	6 cut(s)	129, 189, 223, 520, 993, 1288
BmtI	GCTAGC	2 cut(s)	419, 1475
BmuI	ACTGGG	1 cut(s)	1588
BpiI	GAAGAC	1 cut(s)	743
BpmI	CTGGAG	2 cut(s)	873, 1647
Bpu1102I	GCTNAGC	1 cut(s)	246
BpuEI	CTTGAG	2 cut(s)	179, 884
BpuMI	CCSGG	1 cut(s)	1548
BsaHI	GRCGYC	1 cut(s)	20
BsaI	GGTCTC	2 cut(s)	134, 1240
BsaJI	CCNNGG	4 cut(s)	225, 779, 1077, 1488
BsaXI	ACNNNNNCTCC	6 cut(s)	846, 876, 1344, 1374, 1593, 1623
Bsc4I	CCNNNNNNNGG	6 cut(s)	561, 586, 587, 705, 1352, 1534
Bse1I	ACTGG	1 cut(s)	1583
Bse3DI	GCAATG	2 cut(s)	1570, 1650
BseBI	CCWGG	1 cut(s)	1347
BseDI	CCNNGG	4 cut(s)	225, 779, 1077, 1488
BseGI	GGATG	2 cut(s)	214, 353
BseLI	CCNNNNNNNGG	6 cut(s)	561, 586, 587, 705, 1352, 1534
BseMI	GCAATG	2 cut(s)	1570, 1650
BseMII	CTCAG	1 cut(s)	237
BseNI	ACTGG	1 cut(s)	1583
BseRI	GAGGAG	1 cut(s)	1190
BseXI	GCAGC	6 cut(s)	208, 286, 658, 916, 1471, 1573
BseYI	CCCAGC	1 cut(s)	1025
BsgI	GTGCAG	2 cut(s)	657, 1377
Bsh1236I	CGCG	1 cut(s)	1182
Bsh1285I	CGRYCG	1 cut(s)	40
BshFI	GGCC	5 cut(s)	15, 80, 120, 666, 1685
BshNI	GGYRCC	1 cut(s)	1342
BsiEI	CGRYCG	1 cut(s)	40
BsiHKAI	GWGCWC	1 cut(s)	1291
BsiHKCI	CYCGRG	1 cut(s)	561
BsiSI	CCGG	2 cut(s)	12, 1547
BslFI	GGGAC	3 cut(s)	289, 581, 1228
BslI	CCNNNNNNNGG	6 cut(s)	561, 586, 587, 705, 1352, 1534
BsmAI	GTCTC	4 cut(s)	134, 700, 1240, 1358
BsmFI	GGGAC	3 cut(s)	289, 581, 1228
BsmI	GAATGC	1 cut(s)	687
BsnI	GGCC	5 cut(s)	15, 80, 120, 666, 1685
Bso31I	GGTCTC	2 cut(s)	134, 1240
BsoBI	CYCGRG	1 cut(s)	561
Bsp1286I	GDGCHC	1 cut(s)	1291
Bsp1407I	TGTACA	1 cut(s)	535
Bsp143I	GATC	8 cut(s)	238, 325, 591, 1154, 1242, 1409, 1588, 1713
Bsp1720I	GCTNAGC	1 cut(s)	246
BspACI	CCGC	4 cut(s)	799, 812, 1232, 1682
BspANI	GGCC	5 cut(s)	15, 80, 120, 666, 1685
BspCNI	CTCAG	1 cut(s)	238
BspFNI	CGCG	1 cut(s)	1182
BspHI	TCATGA	1 cut(s)	1294
BspLI	GGNNCC	3 cut(s)	1216, 1344, 1411
BspMAI	CTGCAG	2 cut(s)	304, 1162
BspOI	GCTAGC	2 cut(s)	419, 1475
BspPI	GGATC	7 cut(s)	246, 599, 1162, 1237, 1404, 1417, 1596
BspQI	GCTCTTC	1 cut(s)	1296
BspT107I	GGYRCC	1 cut(s)	1342
BspTNI	GGTCTC	2 cut(s)	134, 1240
BsrDI	GCAATG	2 cut(s)	1570, 1650
BsrGI	TGTACA	1 cut(s)	535
BsrI	ACTGG	1 cut(s)	1583
BssECI	CCNNGG	4 cut(s)	225, 779, 1077, 1488
BssMI	GATC	8 cut(s)	238, 325, 591, 1154, 1242, 1409, 1588, 1713
BssNI	GRCGYC	1 cut(s)	20
BssT1I	CCWWGG	4 cut(s)	225, 779, 1077, 1488
Bst2UI	CCWGG	1 cut(s)	1347
Bst4CI	ACNGT	6 cut(s)	41, 50, 503, 1011, 1339, 1422
Bst6I	CTCTTC	1 cut(s)	1296
BstACI	GRCGYC	1 cut(s)	20
BstAPI	GCANNNNNTGC	2 cut(s)	710, 1439
BstAUI	TGTACA	1 cut(s)	535
BstC8I	GCNNGC	7 cut(s)	318, 378, 394, 417, 715, 1473, 1641
BstDEI	CTNAG	2 cut(s)	246, 1247
BstENI	CCTNNNNNAGG	1 cut(s)	1350
BstF5I	GGATG	2 cut(s)	214, 353
BstFNI	CGCG	1 cut(s)	1182
BstHHI	GCGC	2 cut(s)	1068, 1182
BstKTI	GATC	8 cut(s)	241, 328, 594, 1157, 1245, 1412, 1591, 1716
BstMAI	GTCTC	4 cut(s)	134, 700, 1240, 1358
BstMBI	GATC	8 cut(s)	238, 325, 591, 1154, 1242, 1409, 1588, 1713
BstMCI	CGRYCG	1 cut(s)	40
BstMWI	GCNNNNNNNGC	9 cut(s)	86, 539, 710, 902, 1088, 1439, 1481, 1567, 1679
BstNI	CCWGG	1 cut(s)	1347
BstNSI	RCATGY	2 cut(s)	478, 1270
BstSCI	CCNGG	2 cut(s)	1345, 1546
BstSFI	CTRYAG	4 cut(s)	300, 1007, 1158, 1497
BstUI	CGCG	1 cut(s)	1182
BstV1I	GCAGC	6 cut(s)	208, 286, 658, 916, 1471, 1573
BstV2I	GAAGAC	1 cut(s)	743
BstX2I	RGATCY	4 cut(s)	238, 1154, 1409, 1588
BstYI	RGATCY	4 cut(s)	238, 1154, 1409, 1588
BsuRI	GGCC	5 cut(s)	15, 80, 120, 666, 1685
BtgZI	GCGATG	1 cut(s)	972
BtrI	CACGTC	2 cut(s)	163, 1046
BtsCI	GGATG	2 cut(s)	214, 353
BtsIMutI	CAGTG	2 cut(s)	370, 508
Cac8I	GCNNGC	7 cut(s)	318, 378, 394, 417, 715, 1473, 1641
CciI	TCATGA	1 cut(s)	1294
CfoI	GCGC	2 cut(s)	1068, 1182
Cfr13I	GGNCC	3 cut(s)	119, 1215, 1521
CseI	GACGC	1 cut(s)	28
CsiI	ACCWGGT	1 cut(s)	1345
Csp6I	GTAC	5 cut(s)	46, 230, 536, 577, 1343
CviAII	CATG	7 cut(s)	31, 475, 611, 1070, 1267, 1295, 1711
CviQI	GTAC	5 cut(s)	46, 230, 536, 577, 1343
DdeI	CTNAG	2 cut(s)	246, 1247
DpnI	GATC	8 cut(s)	240, 327, 593, 1156, 1244, 1411, 1590, 1715
DpnII	GATC	8 cut(s)	238, 325, 591, 1154, 1242, 1409, 1588, 1713
EaeI	YGGCCR	2 cut(s)	13, 1683
Eam1104I	CTCTTC	1 cut(s)	1296
EarI	CTCTTC	1 cut(s)	1296
EciI	GGCGGA	1 cut(s)	788
Ecl136II	GAGCTC	1 cut(s)	1289
Eco130I	CCWWGG	4 cut(s)	225, 779, 1077, 1488
Eco24I	GRGCYC	1 cut(s)	1291
Eco31I	GGTCTC	2 cut(s)	134, 1240
Eco32I	GATATC	2 cut(s)	28, 492
Eco47I	GGWCC	2 cut(s)	1215, 1521
Eco53kI	GAGCTC	1 cut(s)	1289
Eco57I	CTGAAG	1 cut(s)	716
Eco88I	CYCGRG	1 cut(s)	561
EcoICRI	GAGCTC	1 cut(s)	1289
EcoNI	CCTNNNNNAGG	1 cut(s)	1350
EcoO109I	RGGNCCY	1 cut(s)	1521
EcoRII	CCWGG	1 cut(s)	1345
EcoRV	GATATC	2 cut(s)	28, 492
EcoT14I	CCWWGG	4 cut(s)	225, 779, 1077, 1488
EcoT38I	GRGCYC	1 cut(s)	1291
ErhI	CCWWGG	4 cut(s)	225, 779, 1077, 1488
FaeI	CATG	7 cut(s)	34, 478, 614, 1073, 1270, 1298, 1714
FalI	AAGNNNNNCTT	2 cut(s)	697, 729
FaqI	GGGAC	3 cut(s)	289, 581, 1228
FatI	CATG	7 cut(s)	30, 474, 610, 1069, 1266, 1294, 1710
FbaI	TGATCA	1 cut(s)	1713
Fnu4HI	GCNGC	7 cut(s)	222, 300, 672, 930, 1485, 1562, 1683
FokI	GGATG	2 cut(s)	201, 340
FriOI	GRGCYC	1 cut(s)	1291
Fsp4HI	GCNGC	7 cut(s)	222, 300, 672, 930, 1485, 1562, 1683
GlaI	GCGC	2 cut(s)	1067, 1181
GluI	GCNGC	7 cut(s)	222, 300, 672, 930, 1485, 1562, 1683
GsaI	CCCAGC	1 cut(s)	1029
GsuI	CTGGAG	2 cut(s)	873, 1647
HaeIII	GGCC	5 cut(s)	15, 80, 120, 666, 1685
HapII	CCGG	2 cut(s)	12, 1547
HgaI	GACGC	1 cut(s)	28
HhaI	GCGC	2 cut(s)	1068, 1182
Hin1I	GRCGYC	1 cut(s)	20
Hin1II	CATG	7 cut(s)	34, 478, 614, 1073, 1270, 1298, 1714
Hin6I	GCGC	2 cut(s)	1066, 1180
HinP1I	GCGC	2 cut(s)	1066, 1180
HpaII	CCGG	2 cut(s)	12, 1547
HphI	GGTGA	4 cut(s)	170, 338, 509, 1562
Hpy166II	GTNNAC	1 cut(s)	1418
Hpy188I	TCNGA	6 cut(s)	440, 735, 870, 1053, 1189, 1700
Hpy188III	TCNNGA	9 cut(s)	53, 131, 196, 254, 640, 1295, 1315, 1325, 1690
Hpy8I	GTNNAC	1 cut(s)	1418
HpyAV	CCTTC	2 cut(s)	418, 1115
HpyCH4III	ACNGT	6 cut(s)	41, 50, 503, 1011, 1339, 1422
HpyCH4IV	ACGT	4 cut(s)	57, 162, 829, 1045
HpyF10VI	GCNNNNNNNGC	9 cut(s)	86, 539, 710, 902, 1088, 1439, 1481, 1567, 1679
HpyF3I	CTNAG	2 cut(s)	246, 1247
HpySE526I	ACGT	4 cut(s)	57, 162, 829, 1045
Hsp92I	GRCGYC	1 cut(s)	20
Hsp92II	CATG	7 cut(s)	34, 478, 614, 1073, 1270, 1298, 1714
HspAI	GCGC	2 cut(s)	1066, 1180
KpnI	GGTACC	1 cut(s)	1346
Ksp22I	TGATCA	1 cut(s)	1713
Kzo9I	GATC	8 cut(s)	238, 325, 591, 1154, 1242, 1409, 1588, 1713
LguI	GCTCTTC	1 cut(s)	1296
LmnI	GCTCC	5 cut(s)	182, 784, 854, 1177, 1549
Lsp1109I	GCAGC	6 cut(s)	208, 286, 658, 916, 1471, 1573
LweI	GCATC	6 cut(s)	129, 189, 223, 520, 993, 1288
MabI	ACCWGGT	1 cut(s)	1345
MaeII	ACGT	4 cut(s)	57, 162, 829, 1045
MaeIII	GTNAC	6 cut(s)	158, 163, 368, 497, 967, 1550
MalI	GATC	8 cut(s)	240, 327, 593, 1156, 1244, 1411, 1590, 1715
MboI	GATC	8 cut(s)	238, 325, 591, 1154, 1242, 1409, 1588, 1713
MboII	GAAGA	7 cut(s)	102, 722, 748, 983, 1070, 1134, 1283
MfeI	CAATTG	1 cut(s)	1428
MflI	RGATCY	4 cut(s)	238, 1154, 1409, 1588
MhlI	GDGCHC	1 cut(s)	1291
MluCI	AATT	7 cut(s)	342, 457, 517, 1200, 1428, 1615, 1701
MlyI	GAGTC	3 cut(s)	1315, 1487, 1638
MmeI	TCCRAC	1 cut(s)	247
MseI	TTAA	5 cut(s)	311, 690, 846, 945, 1611
MspI	CCGG	2 cut(s)	12, 1547
MspR9I	CCNGG	2 cut(s)	1347, 1548
MunI	CAATTG	1 cut(s)	1428
Mva1269I	GAATGC	1 cut(s)	687
MvaI	CCWGG	1 cut(s)	1347
MvnI	CGCG	1 cut(s)	1182
MwoI	GCNNNNNNNGC	9 cut(s)	86, 539, 710, 902, 1088, 1439, 1481, 1567, 1679
NciI	CCSGG	1 cut(s)	1548
NdeII	GATC	8 cut(s)	238, 325, 591, 1154, 1242, 1409, 1588, 1713
NheI	GCTAGC	2 cut(s)	415, 1471
NlaIII	CATG	7 cut(s)	34, 478, 614, 1073, 1270, 1298, 1714
NlaIV	GGNNCC	3 cut(s)	1216, 1344, 1411
NmuCI	GTSAC	5 cut(s)	158, 163, 497, 967, 1550
NspI	RCATGY	2 cut(s)	478, 1270
PagI	TCATGA	1 cut(s)	1294
PciSI	GCTCTTC	1 cut(s)	1296
PcsI	WCGNNNNNNNCGW	1 cut(s)	54
PctI	GAATGC	1 cut(s)	687
PfeI	GAWTC	8 cut(s)	727, 909, 921, 1139, 1328, 1445, 1663, 1693
PkrI	GCNGC	7 cut(s)	223, 301, 673, 931, 1486, 1563, 1684
PleI	GAGTC	3 cut(s)	1315, 1487, 1637
PpsI	GAGTC	3 cut(s)	1315, 1487, 1637
PpuMI	RGGWCCY	1 cut(s)	1521
Psp124BI	GAGCTC	1 cut(s)	1291
Psp5II	RGGWCCY	1 cut(s)	1521
Psp6I	CCWGG	1 cut(s)	1345
PspFI	CCCAGC	1 cut(s)	1025
PspGI	CCWGG	1 cut(s)	1345
PspN4I	GGNNCC	3 cut(s)	1216, 1344, 1411
PspPI	GGNCC	3 cut(s)	119, 1215, 1521
PspPPI	RGGWCCY	1 cut(s)	1521
PsrI	GAACNNNNNNTAC	2 cut(s)	1032, 1064
PstI	CTGCAG	2 cut(s)	304, 1162
PsuI	RGATCY	4 cut(s)	238, 1154, 1409, 1588
RsaI	GTAC	5 cut(s)	47, 231, 537, 578, 1344
RsaNI	GTAC	5 cut(s)	46, 230, 536, 577, 1343
SacI	GAGCTC	1 cut(s)	1291
SapI	GCTCTTC	1 cut(s)	1296
SaqAI	TTAA	5 cut(s)	311, 690, 846, 945, 1611
SatI	GCNGC	7 cut(s)	222, 300, 672, 930, 1485, 1562, 1683
Sau3AI	GATC	8 cut(s)	238, 325, 591, 1154, 1242, 1409, 1588, 1713
Sau96I	GGNCC	3 cut(s)	119, 1215, 1521
SchI	GAGTC	3 cut(s)	1315, 1487, 1638
ScrFI	CCNGG	2 cut(s)	1347, 1548
SduI	GDGCHC	1 cut(s)	1291
SexAI	ACCWGGT	1 cut(s)	1345
SfaNI	GCATC	6 cut(s)	129, 189, 223, 520, 993, 1288
SfcI	CTRYAG	4 cut(s)	300, 1007, 1158, 1497
SinI	GGWCC	2 cut(s)	1215, 1521
SmlI	CTYRAG	2 cut(s)	194, 899
SmoI	CTYRAG	2 cut(s)	194, 899
Sse9I	AATT	7 cut(s)	342, 457, 517, 1200, 1428, 1615, 1701
SsiI	CCGC	4 cut(s)	799, 812, 1232, 1682
SspI	AATATT	1 cut(s)	598
SstI	GAGCTC	1 cut(s)	1291
StyD4I	CCNGG	2 cut(s)	1345, 1546
StyI	CCWWGG	4 cut(s)	225, 779, 1077, 1488
TaaI	ACNGT	6 cut(s)	41, 50, 503, 1011, 1339, 1422
TaiI	ACGT	4 cut(s)	60, 165, 832, 1048
TaqI	TCGA	5 cut(s)	132, 147, 210, 482, 1331
TasI	AATT	7 cut(s)	342, 457, 517, 1200, 1428, 1615, 1701
TatI	WGTACW	1 cut(s)	535
TauI	GCSGC	1 cut(s)	1685
TfiI	GAWTC	8 cut(s)	727, 909, 921, 1139, 1328, 1445, 1663, 1693
Tru1I	TTAA	5 cut(s)	311, 690, 846, 945, 1611
Tru9I	TTAA	5 cut(s)	311, 690, 846, 945, 1611
TscAI	CASTG	2 cut(s)	370, 508
TseFI	GTSAC	5 cut(s)	158, 163, 497, 967, 1550
TseI	GCWGC	6 cut(s)	221, 299, 671, 929, 1484, 1561
Tsp45I	GTSAC	5 cut(s)	158, 163, 497, 967, 1550
TspDTI	ATGAA	3 cut(s)	1179, 1283, 1746
TspRI	CASTG	2 cut(s)	370, 508
VpaK11BI	GGWCC	2 cut(s)	1215, 1521
XagI	CCTNNNNNAGG	1 cut(s)	1350
XapI	RAATTY	2 cut(s)	342, 517
XbaI	TCTAGA	1 cut(s)	1324
XceI	RCATGY	2 cut(s)	478, 1270
XcmI	CCANNNNNNNNNTGG	1 cut(s)	232
XmaJI	CCTAGG	1 cut(s)	779

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.