Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0010305

Physical Location & Seq

Genomic Coordinates Reverse (-)

22366108 .. 22373609

Gene Structure 7502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG227400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGGCTGTTTCCGGCCAGACGCCCGATATCATGGGCGACCGTCAGTACGGTCAGGACGTTCGCACTCAAAATGTGGTGGCCTGTCAAGCTATTGCCAATGTCGTCAAATCTTCACTTGGCCCTGTTGGTCTCGACAAGATGCTTGTCGATGATATTGGTGACGTGACTATTACAAATGATGGAGCTACCATACTCAAGATGCTAGAAGTCGAGCATCCTGCTGCCAAGGTACTTGTGGATCTGGCTGAGCTTCAAGACAAAGAAGTTGGAGATGGGACGACATCAGTTGTCATTCTTGCTGCAGAGTTGTTAAAGCGAGCAAATGATCTAGTGAAGCACAAAATTCACCCAACATCCATTATCAGTGGTTACAGGCTTGCTATGAGGGAAGCGTGCAAATATGTTGAGGAAAAGCTAGCTGTGAAGGTTGAAAAGCTCGGAAAAGATTGCCTAGTAAATTGTGCAAAAACAAGCATGTCCTCGAAGTTGATATCTGGTGACAGTGATTTCTTTGCAAATTTGGTTGTAGATGCTGTACAAGCTGTAAAGATGACCAATGCTCGGGGGGACATCAAGTACCCAATCAAGGGGATCAATATTTTGAAAGCTCATGGAAAAAGTGCAAGAGAAAGTTATCTCTTGAATGGATATGCACTAAATACAGGCCGTGCTGCACAAGGAATGCCACTTAAAGTCTCCCCTGCAAGGATTGCTTGCCTTGACTTGAATCTTCAGAAGACAAAAATGCAAATGGGTGTCCAAGTTTTAGTTAGCGACCCTAGGGAGCTTGAAAAAATCCGCCAAAGAGAAGCGGATATGACGAAAGAACGTATAGAGAAACTTCTTAAAGCTGGAGCAAATGTTATTCTGACTACAAAAGGGATTGATGATATGGCACTCAAGTATTTTGTGGAGGCTGGGGCTATCGCTGTAAGACGTGTTCAGAAAGAAGATATGCGCCATGTTGCCAAGGCTACGGGTGCAACAATGGTATCAACTTTCGCTGATATGGAAGGAGAGGAAACATTTGATTCTTCACTTCTTGGATCTGCAGATGAAGTTGTAGAGGAGCGCGTTTCTGATGATGATGTAATTTTGATAAAAGGGACCAAAACTAATAGTGCGGTCTCCTTGATCCTTAGAGGTGCAAATGATTACATGCTTGACGAGATGGAGAGAGCTCTTCATGATGCTCTATCTATTGTCAAGAGGACTCTAGAATCGAACACGGTGGTACCTGGTGGAGGTGCAGTTGAGACTGCCTTGTGTGAGTATTTGGAGTGCTTTGCTATAACACTAGGATCCCGTGAACAGTTGGCAATTGCAGAGTTTGCTGAATCTTTGACAATCATACCAAAGGTGCTAGCTGTCAATGCTGCCAAGGACTCTACAGACTTGGTTGCAAAGATGAGGTCCTACCACCACAAGGCACAAGCTCCGGGTGACAGGAGGCAGCAGTCGCATTGCAACTGGGGTTTGGATCTTGTAAAAGGAGTAGTAGTTAATAATTTAGAGGCTGGAGTCATTGAGCCTGCAATGAGCAAAATAAAGATGATTCAGTTTGCAACAGAAGCGGCCATCACGATTCTCCGAATTGATGACATGATCAGGCTAGTCAAAGATGAAAGTCAGGGTGAGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005832 GO:0006457 GO:0006458 GO:0008150 GO:0009987 GO:0032991 GO:0044183 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0051082 GO:0061077 GO:0101031

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

547

Amino Acids

59.43

Weight (kDa)

5.68

Isoelectric Point (pI)

34.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	31 - 537	2.9e-160	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20050
fragaria_vesca	FvH4_5g20270
malus_domestica	MD04G1052300.v1.1 MD06G1047900.v1.1
prunus_persica	Prupe.5G058100_v2.0.a1
pyrus_communis	pycom04g04600 pycom06g04080 pycom06g04090
rosa_chinensis	RchiOBHm_Chr7g0205331
rosa_laevigata	RLG00000003387
rosa_multiflora	Rmu_sc0009317.1_g000004 Rmu_sc0009725.1_g000010 Rmu_ssc0000004.1_g000023
rosa_roxburghii	Rroxscaffold_3G00252460
rosa_rugosa	Rorug07G0089800
rosa_samantha	Rh7AG220500 Rh7BG216600 Rh7CG233400 Rh7CG233500 Rh7DG227400
rosa_wichuraiana	Rw7G019060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1234
AccB1I	GGYRCC	1 cut(s)	1234
AccII	CGCG	1 cut(s)	1074
AciI	CCGC	4 cut(s)	799, 812, 1124, 1574
AclWI	GGATC	7 cut(s)	246, 599, 1054, 1129, 1296, 1309, 1488
AcoI	YGGCCR	2 cut(s)	13, 1575
AcsI	RAATTY	2 cut(s)	342, 517
AcuI	CTGAAG	1 cut(s)	716
AcyI	GRCGYC	1 cut(s)	20
AfaI	GTAC	5 cut(s)	47, 231, 537, 578, 1236
AfiI	CCNNNNNNNGG	6 cut(s)	561, 586, 587, 705, 1244, 1426
AflIII	ACRYGT	1 cut(s)	937
AgsI	TTSAA	6 cut(s)	254, 431, 604, 643, 727, 791
AjiI	CACGTC	2 cut(s)	163, 938
AjnI	CCWGG	1 cut(s)	1237
Alw21I	GWGCWC	1 cut(s)	1183
Alw26I	GTCTC	4 cut(s)	134, 700, 1132, 1250
AlwI	GGATC	7 cut(s)	246, 599, 1054, 1129, 1296, 1309, 1488
Ama87I	CYCGRG	1 cut(s)	561
AoxI	GGCC	5 cut(s)	13, 78, 118, 664, 1575
ApeKI	GCWGC	5 cut(s)	221, 299, 671, 1376, 1453
ApoI	RAATTY	2 cut(s)	342, 517
ArsI	GACNNNNNNTTYG	2 cut(s)	1397, 1429
Asp718I	GGTACC	1 cut(s)	1234
AspA2I	CCTAGG	1 cut(s)	779
AspLEI	GCGC	2 cut(s)	960, 1074
AspS9I	GGNCC	3 cut(s)	119, 1107, 1413
AsuC2I	CCSGG	1 cut(s)	1440
AsuHPI	GGTGA	4 cut(s)	170, 338, 509, 1454
AsuNHI	GCTAGC	2 cut(s)	415, 1363
AvaI	CYCGRG	1 cut(s)	561
AvaII	GGWCC	2 cut(s)	1107, 1413
AvrII	CCTAGG	1 cut(s)	779
BaeI	ACNNNNGTAYC	4 cut(s)	975, 1008, 1218, 1251
BamHI	GGATCC	1 cut(s)	1301
BanI	GGYRCC	1 cut(s)	1234
BanII	GRGCYC	1 cut(s)	1183
BbsI	GAAGAC	1 cut(s)	743
Bbv12I	GWGCWC	1 cut(s)	1183
BbvI	GCAGC	5 cut(s)	208, 286, 658, 1363, 1465
BccI	CCATC	4 cut(s)	173, 266, 1165, 1586
BceAI	ACGGC	1 cut(s)	651
BcgI	CGANNNNNNTGC	2 cut(s)	200, 234
BciT130I	CCWGG	1 cut(s)	1239
BclI	TGATCA	1 cut(s)	1605
BcnI	CCSGG	1 cut(s)	1440
BcoDI	GTCTC	4 cut(s)	134, 700, 1132, 1250
BfaI	CTAG	9 cut(s)	203, 329, 416, 452, 780, 1217, 1298, 1364, 1613
BfmI	CTRYAG	3 cut(s)	300, 1050, 1389
BisI	GCNGC	6 cut(s)	222, 300, 672, 1377, 1454, 1575
BlnI	CCTAGG	1 cut(s)	779
BlpI	GCTNAGC	1 cut(s)	246
BlsI	GCNGC	6 cut(s)	223, 301, 673, 1378, 1455, 1576
Bme1390I	CCNGG	2 cut(s)	1239, 1440
Bme18I	GGWCC	2 cut(s)	1107, 1413
BmeT110I	CYCGRG	1 cut(s)	561
BmgBI	CACGTC	2 cut(s)	163, 938
BmgT120I	GGNCC	3 cut(s)	119, 1107, 1413
BmiI	GGNNCC	3 cut(s)	1108, 1236, 1303
BmrFI	CCNGG	2 cut(s)	1239, 1440
BmrI	ACTGGG	1 cut(s)	1480
BmsI	GCATC	5 cut(s)	129, 189, 223, 520, 1180
BmtI	GCTAGC	2 cut(s)	419, 1367
BmuI	ACTGGG	1 cut(s)	1480
BpiI	GAAGAC	1 cut(s)	743
BpmI	CTGGAG	2 cut(s)	873, 1539
Bpu1102I	GCTNAGC	1 cut(s)	246
BpuEI	CTTGAG	2 cut(s)	179, 884
BpuMI	CCSGG	1 cut(s)	1440
BsaHI	GRCGYC	1 cut(s)	20
BsaI	GGTCTC	2 cut(s)	134, 1132
BsaJI	CCNNGG	4 cut(s)	225, 779, 969, 1380
BsaXI	ACNNNNNCTCC	6 cut(s)	846, 876, 1236, 1266, 1485, 1515
Bsc4I	CCNNNNNNNGG	6 cut(s)	561, 586, 587, 705, 1244, 1426
Bse1I	ACTGG	1 cut(s)	1475
Bse3DI	GCAATG	2 cut(s)	1462, 1542
BseBI	CCWGG	1 cut(s)	1239
BseDI	CCNNGG	4 cut(s)	225, 779, 969, 1380
BseGI	GGATG	2 cut(s)	214, 353
BseLI	CCNNNNNNNGG	6 cut(s)	561, 586, 587, 705, 1244, 1426
BseMI	GCAATG	2 cut(s)	1462, 1542
BseMII	CTCAG	1 cut(s)	237
BseNI	ACTGG	1 cut(s)	1475
BseRI	GAGGAG	1 cut(s)	1082
BseXI	GCAGC	5 cut(s)	208, 286, 658, 1363, 1465
BseYI	CCCAGC	1 cut(s)	917
BsgI	GTGCAG	2 cut(s)	657, 1269
Bsh1236I	CGCG	1 cut(s)	1074
Bsh1285I	CGRYCG	1 cut(s)	40
BshFI	GGCC	5 cut(s)	15, 80, 120, 666, 1577
BshNI	GGYRCC	1 cut(s)	1234
BsiEI	CGRYCG	1 cut(s)	40
BsiHKAI	GWGCWC	1 cut(s)	1183
BsiHKCI	CYCGRG	1 cut(s)	561
BsiSI	CCGG	2 cut(s)	12, 1439
BslFI	GGGAC	3 cut(s)	289, 581, 1120
BslI	CCNNNNNNNGG	6 cut(s)	561, 586, 587, 705, 1244, 1426
BsmAI	GTCTC	4 cut(s)	134, 700, 1132, 1250
BsmFI	GGGAC	3 cut(s)	289, 581, 1120
BsmI	GAATGC	1 cut(s)	687
BsnI	GGCC	5 cut(s)	15, 80, 120, 666, 1577
Bso31I	GGTCTC	2 cut(s)	134, 1132
BsoBI	CYCGRG	1 cut(s)	561
Bsp1286I	GDGCHC	1 cut(s)	1183
Bsp1407I	TGTACA	1 cut(s)	535
Bsp143I	GATC	8 cut(s)	238, 325, 591, 1046, 1134, 1301, 1480, 1605
Bsp1720I	GCTNAGC	1 cut(s)	246
BspACI	CCGC	4 cut(s)	799, 812, 1124, 1574
BspANI	GGCC	5 cut(s)	15, 80, 120, 666, 1577
BspCNI	CTCAG	1 cut(s)	238
BspFNI	CGCG	1 cut(s)	1074
BspHI	TCATGA	1 cut(s)	1186
BspLI	GGNNCC	3 cut(s)	1108, 1236, 1303
BspMAI	CTGCAG	2 cut(s)	304, 1054
BspOI	GCTAGC	2 cut(s)	419, 1367
BspPI	GGATC	7 cut(s)	246, 599, 1054, 1129, 1296, 1309, 1488
BspQI	GCTCTTC	1 cut(s)	1188
BspT107I	GGYRCC	1 cut(s)	1234
BspTNI	GGTCTC	2 cut(s)	134, 1132
BsrDI	GCAATG	2 cut(s)	1462, 1542
BsrGI	TGTACA	1 cut(s)	535
BsrI	ACTGG	1 cut(s)	1475
BssECI	CCNNGG	4 cut(s)	225, 779, 969, 1380
BssMI	GATC	8 cut(s)	238, 325, 591, 1046, 1134, 1301, 1480, 1605
BssNI	GRCGYC	1 cut(s)	20
BssT1I	CCWWGG	4 cut(s)	225, 779, 969, 1380
Bst2UI	CCWGG	1 cut(s)	1239
Bst4CI	ACNGT	5 cut(s)	41, 50, 503, 1231, 1314
Bst6I	CTCTTC	1 cut(s)	1188
BstACI	GRCGYC	1 cut(s)	20
BstAPI	GCANNNNNTGC	2 cut(s)	710, 1331
BstAUI	TGTACA	1 cut(s)	535
BstC8I	GCNNGC	7 cut(s)	318, 378, 394, 417, 715, 1365, 1533
BstDEI	CTNAG	2 cut(s)	246, 1139
BstENI	CCTNNNNNAGG	1 cut(s)	1242
BstF5I	GGATG	2 cut(s)	214, 353
BstFNI	CGCG	1 cut(s)	1074
BstHHI	GCGC	2 cut(s)	960, 1074
BstKTI	GATC	8 cut(s)	241, 328, 594, 1049, 1137, 1304, 1483, 1608
BstMAI	GTCTC	4 cut(s)	134, 700, 1132, 1250
BstMBI	GATC	8 cut(s)	238, 325, 591, 1046, 1134, 1301, 1480, 1605
BstMCI	CGRYCG	1 cut(s)	40
BstMWI	GCNNNNNNNGC	8 cut(s)	86, 539, 710, 980, 1331, 1373, 1459, 1571
BstNI	CCWGG	1 cut(s)	1239
BstNSI	RCATGY	2 cut(s)	478, 1162
BstSCI	CCNGG	2 cut(s)	1237, 1438
BstSFI	CTRYAG	3 cut(s)	300, 1050, 1389
BstUI	CGCG	1 cut(s)	1074
BstV1I	GCAGC	5 cut(s)	208, 286, 658, 1363, 1465
BstV2I	GAAGAC	1 cut(s)	743
BstX2I	RGATCY	4 cut(s)	238, 1046, 1301, 1480
BstYI	RGATCY	4 cut(s)	238, 1046, 1301, 1480
BsuRI	GGCC	5 cut(s)	15, 80, 120, 666, 1577
BtrI	CACGTC	2 cut(s)	163, 938
BtsCI	GGATG	2 cut(s)	214, 353
BtsIMutI	CAGTG	2 cut(s)	370, 508
Cac8I	GCNNGC	7 cut(s)	318, 378, 394, 417, 715, 1365, 1533
CciI	TCATGA	1 cut(s)	1186
CfoI	GCGC	2 cut(s)	960, 1074
Cfr13I	GGNCC	3 cut(s)	119, 1107, 1413
CseI	GACGC	1 cut(s)	28
CsiI	ACCWGGT	1 cut(s)	1237
Csp6I	GTAC	5 cut(s)	46, 230, 536, 577, 1235
CviAII	CATG	7 cut(s)	31, 475, 611, 962, 1159, 1187, 1603
CviQI	GTAC	5 cut(s)	46, 230, 536, 577, 1235
DdeI	CTNAG	2 cut(s)	246, 1139
DpnI	GATC	8 cut(s)	240, 327, 593, 1048, 1136, 1303, 1482, 1607
DpnII	GATC	8 cut(s)	238, 325, 591, 1046, 1134, 1301, 1480, 1605
EaeI	YGGCCR	2 cut(s)	13, 1575
Eam1104I	CTCTTC	1 cut(s)	1188
EarI	CTCTTC	1 cut(s)	1188
EciI	GGCGGA	1 cut(s)	788
Ecl136II	GAGCTC	1 cut(s)	1181
Eco130I	CCWWGG	4 cut(s)	225, 779, 969, 1380
Eco24I	GRGCYC	1 cut(s)	1183
Eco31I	GGTCTC	2 cut(s)	134, 1132
Eco32I	GATATC	2 cut(s)	28, 492
Eco47I	GGWCC	2 cut(s)	1107, 1413
Eco53kI	GAGCTC	1 cut(s)	1181
Eco57I	CTGAAG	1 cut(s)	716
Eco88I	CYCGRG	1 cut(s)	561
EcoICRI	GAGCTC	1 cut(s)	1181
EcoNI	CCTNNNNNAGG	1 cut(s)	1242
EcoO109I	RGGNCCY	1 cut(s)	1413
EcoRII	CCWGG	1 cut(s)	1237
EcoRV	GATATC	2 cut(s)	28, 492
EcoT14I	CCWWGG	4 cut(s)	225, 779, 969, 1380
EcoT38I	GRGCYC	1 cut(s)	1183
ErhI	CCWWGG	4 cut(s)	225, 779, 969, 1380
FaeI	CATG	7 cut(s)	34, 478, 614, 965, 1162, 1190, 1606
FalI	AAGNNNNNCTT	2 cut(s)	697, 729
FaqI	GGGAC	3 cut(s)	289, 581, 1120
FatI	CATG	7 cut(s)	30, 474, 610, 961, 1158, 1186, 1602
FbaI	TGATCA	1 cut(s)	1605
Fnu4HI	GCNGC	6 cut(s)	222, 300, 672, 1377, 1454, 1575
FokI	GGATG	2 cut(s)	201, 340
FriOI	GRGCYC	1 cut(s)	1183
Fsp4HI	GCNGC	6 cut(s)	222, 300, 672, 1377, 1454, 1575
FspBI	CTAG	9 cut(s)	203, 329, 416, 452, 780, 1217, 1298, 1364, 1613
GlaI	GCGC	2 cut(s)	959, 1073
GluI	GCNGC	6 cut(s)	222, 300, 672, 1377, 1454, 1575
GsaI	CCCAGC	1 cut(s)	921
GsuI	CTGGAG	2 cut(s)	873, 1539
HaeIII	GGCC	5 cut(s)	15, 80, 120, 666, 1577
HapII	CCGG	2 cut(s)	12, 1439
HgaI	GACGC	1 cut(s)	28
HhaI	GCGC	2 cut(s)	960, 1074
Hin1I	GRCGYC	1 cut(s)	20
Hin1II	CATG	7 cut(s)	34, 478, 614, 965, 1162, 1190, 1606
Hin6I	GCGC	2 cut(s)	958, 1072
HinP1I	GCGC	2 cut(s)	958, 1072
HinfI	GANTC	9 cut(s)	727, 1031, 1213, 1220, 1337, 1385, 1521, 1555, 1585
HpaII	CCGG	2 cut(s)	12, 1439
HphI	GGTGA	4 cut(s)	170, 338, 509, 1454
Hpy166II	GTNNAC	1 cut(s)	1310
Hpy188I	TCNGA	6 cut(s)	440, 735, 870, 945, 1081, 1592
Hpy188III	TCNNGA	9 cut(s)	53, 131, 196, 254, 640, 1187, 1207, 1217, 1582
Hpy8I	GTNNAC	1 cut(s)	1310
HpyAV	CCTTC	2 cut(s)	418, 1007
HpyCH4III	ACNGT	5 cut(s)	41, 50, 503, 1231, 1314
HpyCH4IV	ACGT	4 cut(s)	57, 162, 829, 937
HpyF10VI	GCNNNNNNNGC	8 cut(s)	86, 539, 710, 980, 1331, 1373, 1459, 1571
HpyF3I	CTNAG	2 cut(s)	246, 1139
HpySE526I	ACGT	4 cut(s)	57, 162, 829, 937
Hsp92I	GRCGYC	1 cut(s)	20
Hsp92II	CATG	7 cut(s)	34, 478, 614, 965, 1162, 1190, 1606
HspAI	GCGC	2 cut(s)	958, 1072
KpnI	GGTACC	1 cut(s)	1238
Ksp22I	TGATCA	1 cut(s)	1605
Kzo9I	GATC	8 cut(s)	238, 325, 591, 1046, 1134, 1301, 1480, 1605
LguI	GCTCTTC	1 cut(s)	1188
LmnI	GCTCC	5 cut(s)	182, 784, 854, 1069, 1441
Lsp1109I	GCAGC	5 cut(s)	208, 286, 658, 1363, 1465
LweI	GCATC	5 cut(s)	129, 189, 223, 520, 1180
MabI	ACCWGGT	1 cut(s)	1237
MaeI	CTAG	9 cut(s)	203, 329, 416, 452, 780, 1217, 1298, 1364, 1613
MaeII	ACGT	4 cut(s)	57, 162, 829, 937
MaeIII	GTNAC	5 cut(s)	158, 163, 368, 497, 1442
MalI	GATC	8 cut(s)	240, 327, 593, 1048, 1136, 1303, 1482, 1607
MboI	GATC	8 cut(s)	238, 325, 591, 1046, 1134, 1301, 1480, 1605
MboII	GAAGA	6 cut(s)	102, 722, 748, 962, 1026, 1175
MfeI	CAATTG	1 cut(s)	1320
MflI	RGATCY	4 cut(s)	238, 1046, 1301, 1480
MhlI	GDGCHC	1 cut(s)	1183
MluCI	AATT	7 cut(s)	342, 457, 517, 1092, 1320, 1507, 1593
MlyI	GAGTC	3 cut(s)	1207, 1379, 1530
MmeI	TCCRAC	1 cut(s)	247
MseI	TTAA	4 cut(s)	311, 690, 846, 1503
MspI	CCGG	2 cut(s)	12, 1439
MspR9I	CCNGG	2 cut(s)	1239, 1440
MunI	CAATTG	1 cut(s)	1320
Mva1269I	GAATGC	1 cut(s)	687
MvaI	CCWGG	1 cut(s)	1239
MvnI	CGCG	1 cut(s)	1074
MwoI	GCNNNNNNNGC	8 cut(s)	86, 539, 710, 980, 1331, 1373, 1459, 1571
NciI	CCSGG	1 cut(s)	1440
NdeII	GATC	8 cut(s)	238, 325, 591, 1046, 1134, 1301, 1480, 1605
NheI	GCTAGC	2 cut(s)	415, 1363
NlaIII	CATG	7 cut(s)	34, 478, 614, 965, 1162, 1190, 1606
NlaIV	GGNNCC	3 cut(s)	1108, 1236, 1303
NmuCI	GTSAC	4 cut(s)	158, 163, 497, 1442
NspI	RCATGY	2 cut(s)	478, 1162
PagI	TCATGA	1 cut(s)	1186
PciSI	GCTCTTC	1 cut(s)	1188
PcsI	WCGNNNNNNNCGW	1 cut(s)	54
PctI	GAATGC	1 cut(s)	687
PfeI	GAWTC	6 cut(s)	727, 1031, 1220, 1337, 1555, 1585
PkrI	GCNGC	6 cut(s)	223, 301, 673, 1378, 1455, 1576
PleI	GAGTC	3 cut(s)	1207, 1379, 1529
PpsI	GAGTC	3 cut(s)	1207, 1379, 1529
PpuMI	RGGWCCY	1 cut(s)	1413
Psp124BI	GAGCTC	1 cut(s)	1183
Psp5II	RGGWCCY	1 cut(s)	1413
Psp6I	CCWGG	1 cut(s)	1237
PspFI	CCCAGC	1 cut(s)	917
PspGI	CCWGG	1 cut(s)	1237
PspN4I	GGNNCC	3 cut(s)	1108, 1236, 1303
PspPI	GGNCC	3 cut(s)	119, 1107, 1413
PspPPI	RGGWCCY	1 cut(s)	1413
PsrI	GAACNNNNNNTAC	2 cut(s)	924, 956
PstI	CTGCAG	2 cut(s)	304, 1054
PsuI	RGATCY	4 cut(s)	238, 1046, 1301, 1480
RsaI	GTAC	5 cut(s)	47, 231, 537, 578, 1236
RsaNI	GTAC	5 cut(s)	46, 230, 536, 577, 1235
SacI	GAGCTC	1 cut(s)	1183
SapI	GCTCTTC	1 cut(s)	1188
SaqAI	TTAA	4 cut(s)	311, 690, 846, 1503
SatI	GCNGC	6 cut(s)	222, 300, 672, 1377, 1454, 1575
Sau3AI	GATC	8 cut(s)	238, 325, 591, 1046, 1134, 1301, 1480, 1605
Sau96I	GGNCC	3 cut(s)	119, 1107, 1413
SchI	GAGTC	3 cut(s)	1207, 1379, 1530
ScrFI	CCNGG	2 cut(s)	1239, 1440
SduI	GDGCHC	1 cut(s)	1183
SexAI	ACCWGGT	1 cut(s)	1237
SfaNI	GCATC	5 cut(s)	129, 189, 223, 520, 1180
SfcI	CTRYAG	3 cut(s)	300, 1050, 1389
SinI	GGWCC	2 cut(s)	1107, 1413
SmlI	CTYRAG	2 cut(s)	194, 899
SmoI	CTYRAG	2 cut(s)	194, 899
Sse9I	AATT	7 cut(s)	342, 457, 517, 1092, 1320, 1507, 1593
SsiI	CCGC	4 cut(s)	799, 812, 1124, 1574
SspI	AATATT	1 cut(s)	598
SspMI	CTAG	9 cut(s)	203, 329, 416, 452, 780, 1217, 1298, 1364, 1613
SstI	GAGCTC	1 cut(s)	1183
StyD4I	CCNGG	2 cut(s)	1237, 1438
StyI	CCWWGG	4 cut(s)	225, 779, 969, 1380
TaaI	ACNGT	5 cut(s)	41, 50, 503, 1231, 1314
TaiI	ACGT	4 cut(s)	60, 165, 832, 940
TaqI	TCGA	5 cut(s)	132, 147, 210, 482, 1223
TasI	AATT	7 cut(s)	342, 457, 517, 1092, 1320, 1507, 1593
TatI	WGTACW	1 cut(s)	535
TauI	GCSGC	1 cut(s)	1577
TfiI	GAWTC	6 cut(s)	727, 1031, 1220, 1337, 1555, 1585
Tru1I	TTAA	4 cut(s)	311, 690, 846, 1503
Tru9I	TTAA	4 cut(s)	311, 690, 846, 1503
TscAI	CASTG	2 cut(s)	370, 508
TseFI	GTSAC	4 cut(s)	158, 163, 497, 1442
TseI	GCWGC	5 cut(s)	221, 299, 671, 1376, 1453
Tsp45I	GTSAC	4 cut(s)	158, 163, 497, 1442
TspDTI	ATGAA	3 cut(s)	1071, 1175, 1638
TspRI	CASTG	2 cut(s)	370, 508
VpaK11BI	GGWCC	2 cut(s)	1107, 1413
XagI	CCTNNNNNAGG	1 cut(s)	1242
XapI	RAATTY	2 cut(s)	342, 517
XbaI	TCTAGA	1 cut(s)	1216
XceI	RCATGY	2 cut(s)	478, 1162
XcmI	CCANNNNNNNNNTGG	1 cut(s)	232
XmaJI	CCTAGG	1 cut(s)	779
XspI	CTAG	9 cut(s)	203, 329, 416, 452, 780, 1217, 1298, 1364, 1613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.