Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0010305

Physical Location & Seq

Genomic Coordinates Forward (+)

46474827 .. 46484016

Gene Structure 9190 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00252460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGGCTGTTTCCGGCCAGACGCCAGATATCATGGGCGACCGTCAGTACGGTCAGGACGTTCGCACTCAAAATGTGGTGGCCTGTCAAGCTATTGCCAATGTCGTCAAATCTTCACTTGGCCCTGTTGGTCTCGACAAGATGCTTGTTGATGATATTGGTGACGTGACTATTACAAATGATGGAGCTACCATACTCAAGATGCTAGAAGTGGAGCATCCTGCTGCCAAGGTACTTGTGGATCTGGCCGAGCTTCAAGACAAAGAAGTTGGAGATGGGACGACATCAGTTGTCATTCTTGCTGCAGAGTTGTTAAAGCGAGCAAATGATCTAGTGAAGCACAAAATTCACCCAACATCCATTATCAGTGGTTACAGGCTTGCTATGAGGGAAGCATGCAAATATGTTGAGGAAAAGTTAGCCGTGAAGGTTGAAAAGCTTGGAAAAGATTGCCTAGTAAATTGTGCAAAAACAAGCATGTCCTCGAAGTTGATATCTGGTGACAGTGATTTCTTTGCAAATTTGGTTGTAGATGCTGTACAAGCTGTAAAGATGACCAATGCTCGGGGGACATCAAGTACCCAATCAAGTTGCTCTTTTCATTTTCAGGGGATTAATATTTTGAAAGCTCATGGAAAAAGTGCAAGAGAAAGTTATCTCTTGAATGGATATGCACTAAATACAGGCCGTGCTGCACAAGGAATGCCACTTAAAGTCTCCCCTGCAAGGATTGCTTGCCTTGACTTGAATCTTCAGAAGACAAAAATGCAAATGGGTGTCCAAGTTTTAGTTAGCGACCCTAGGGAGCTTGAAAAAATCCGCCAAAGAGAAGCGGATATGACGAAAGAACGTATAGAGAAACTTCTTAAAGCTGGAGCAAATGTTATTCTGACTACAAAAGGGATTGATGATATGGCACTCAAGGCAAGATTCTTTTTTCTTCCTTATGTGATGCTACAGTATTTTGTGGAGGCTGGGGCTATCGCTGTAAGACGTGTTCAGAAAGAAGATATGCGCCATGTTGCCAAGGCTACGGGTGCAACAATGGTATCAACTTTCGCTGATATGGAAGGGGAGGAAACATTTGATTCTTCACTTCTTGGATCTGCAGATGAAGTTGTAGAGGAGCGCGTTTCTGATGATGATGTAATTTTGATAAAAGGGACCAAAACTAATAGTGCGGTCTCTTTGATCCTTAGAGGTGCAAATGACTACATGCTTGACGAGATGGAGAGAGCTCTTCATGATGCTCTATCTATAGTCAAGAGGACTCTAGAATCGAACACGGTGGTACCTGGTGGAGGTGCAGTTGAGACCGCCTTGTGTGAGTATTTGGAGTGCTTTGCTATAACACTAGGATCTCGTGAACAGTTGGCAATTGCAGAGTTTGCTGAATCTTTGACAATCATACCAAAGGTGCTAGCTGTCAATGCTGCCAAGGACTCTACAGACTTGGTTGCAAAGATGAGGTCCTACCACCACAAGGCACAAGCTCCGGGTGACAGGAGGCAGCAGTCGCATTGCAACTGGGGTTTGGATCTTGTAAAAGGAGTAGTAGTTAATAACTTAGAGGCTGGAGTCATTGAGCCTGCAATGAGCAAAATAAAGATGATTCAGTTTGCAACTGAAGCGGCCATCACAATTCTCCGAATTGATGACATGATCAGGCTAGTCAAAGATGAAAGTCAGGGGGAGACAGCAATCTGCATCCAGTTCTACTTCTTTCCTAGTCTTCTACCAGAGGGCACCGAAAGACTTGGCGTCTTTACTATACCTAAAAATTACACGAGTAATTATGTTGTGTTCATGGATCGTTTGGTGAACACTGCTCAAGATGTGGAGTTTCTTGTTAAGAAAGGAATTGTCGAAAATGTGGTAATTAACAAGCTTGCTACTGATGGAGTTATTGTGGACGCCACTTTTGCGAACAACGAGGGTTCCACTATTGTTAAGAAGCTTGTTGAAGGAGTTATTGTGGACTCCAATAATTTTTATTTGGTATATACTCTGCGAAGACTTGAACGAGTACTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005832 GO:0006457 GO:0006458 GO:0008150 GO:0009987 GO:0032991 GO:0044183 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0051082 GO:0061077 GO:0101031

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

676

Amino Acids

74.0

Weight (kDa)

5.76

Isoelectric Point (pI)

33.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	31 - 555	4e-154	TCP-1/cpn60 chaperonin family
DUF247	PF03140	593 - 627	2.2e-07	Plant protein of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20050
fragaria_vesca	FvH4_5g20270
malus_domestica	MD04G1052300.v1.1 MD06G1047900.v1.1
prunus_persica	Prupe.5G058100_v2.0.a1
pyrus_communis	pycom04g04600 pycom06g04080 pycom06g04090
rosa_chinensis	RchiOBHm_Chr7g0205331
rosa_laevigata	RLG00000003387
rosa_multiflora	Rmu_sc0009317.1_g000004 Rmu_sc0009725.1_g000010 Rmu_ssc0000004.1_g000023
rosa_roxburghii	Rroxscaffold_3G00252460
rosa_rugosa	Rorug07G0089800
rosa_samantha	Rh7AG220500 Rh7BG216600 Rh7CG233400 Rh7CG233500 Rh7DG227400
rosa_wichuraiana	Rw7G019060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1288
AccB1I	GGYRCC	2 cut(s)	1288, 1742
AccII	CGCG	1 cut(s)	1128
AciI	CCGC	5 cut(s)	817, 830, 1178, 1314, 1628
AclWI	GGATC	6 cut(s)	246, 1108, 1183, 1363, 1542, 1815
AcoI	YGGCCR	3 cut(s)	13, 243, 1629
AcsI	RAATTY	2 cut(s)	342, 517
AcuI	CTGAAG	2 cut(s)	734, 1644
AcyI	GRCGYC	3 cut(s)	20, 1758, 1911
AfaI	GTAC	6 cut(s)	47, 231, 537, 577, 1290, 2025
AfiI	CCNNNNNNNGG	4 cut(s)	561, 723, 1298, 1480
AflIII	ACRYGT	1 cut(s)	991
AgsI	TTSAA	8 cut(s)	254, 431, 622, 661, 745, 809, 1961, 2018
AhdI	GACNNNNNGTC	1 cut(s)	1757
AjiI	CACGTC	2 cut(s)	163, 992
AjnI	CCWGG	1 cut(s)	1291
Alw21I	GWGCWC	1 cut(s)	1237
Alw26I	GTCTC	5 cut(s)	134, 718, 1186, 1304, 1685
AlwI	GGATC	6 cut(s)	246, 1108, 1183, 1363, 1542, 1815
Ama87I	CYCGRG	1 cut(s)	561
AoxI	GGCC	6 cut(s)	13, 78, 118, 243, 682, 1629
ApeKI	GCWGC	5 cut(s)	221, 299, 689, 1430, 1507
ApoI	RAATTY	2 cut(s)	342, 517
ArsI	GACNNNNNNTTYG	4 cut(s)	1451, 1483, 1901, 1933
AseI	ATTAAT	1 cut(s)	612
Asp718I	GGTACC	1 cut(s)	1288
AspA2I	CCTAGG	1 cut(s)	797
AspLEI	GCGC	2 cut(s)	1014, 1128
AspS9I	GGNCC	3 cut(s)	119, 1161, 1467
AsuC2I	CCSGG	1 cut(s)	1494
AsuHPI	GGTGA	5 cut(s)	170, 338, 509, 1508, 1828
AsuNHI	GCTAGC	1 cut(s)	1417
AvaI	CYCGRG	1 cut(s)	561
AvaII	GGWCC	2 cut(s)	1161, 1467
AvrII	CCTAGG	1 cut(s)	797
BaeGI	GKGCMC	1 cut(s)	1745
BaeI	ACNNNNGTAYC	4 cut(s)	1029, 1062, 1272, 1305
BanI	GGYRCC	2 cut(s)	1288, 1742
BanII	GRGCYC	1 cut(s)	1237
BauI	CACGAG	2 cut(s)	1359, 1783
BbsI	GAAGAC	3 cut(s)	761, 1721, 2017
Bbv12I	GWGCWC	1 cut(s)	1237
BbvI	GCAGC	5 cut(s)	208, 286, 676, 1417, 1519
BccI	CCATC	5 cut(s)	173, 266, 1219, 1640, 1889
BceAI	ACGGC	2 cut(s)	404, 669
BciT130I	CCWGG	1 cut(s)	1293
BclI	TGATCA	1 cut(s)	1659
BcnI	CCSGG	1 cut(s)	1494
BcoDI	GTCTC	5 cut(s)	134, 718, 1186, 1304, 1685
BfaI	CTAG	9 cut(s)	203, 329, 452, 798, 1271, 1352, 1418, 1667, 1725
BfmI	CTRYAG	5 cut(s)	300, 953, 1104, 1254, 1443
BisI	GCNGC	6 cut(s)	222, 300, 690, 1431, 1508, 1629
BlnI	CCTAGG	1 cut(s)	797
BlsI	GCNGC	6 cut(s)	223, 301, 691, 1432, 1509, 1630
BmcAI	AGTACT	1 cut(s)	2025
Bme1390I	CCNGG	2 cut(s)	1293, 1494
Bme18I	GGWCC	2 cut(s)	1161, 1467
BmeRI	GACNNNNNGTC	1 cut(s)	1757
BmeT110I	CYCGRG	1 cut(s)	561
BmgBI	CACGTC	2 cut(s)	163, 992
BmgT120I	GGNCC	3 cut(s)	119, 1161, 1467
BmiI	GGNNCC	4 cut(s)	1162, 1290, 1744, 1936
BmrFI	CCNGG	2 cut(s)	1293, 1494
BmrI	ACTGGG	1 cut(s)	1534
BmsI	GCATC	7 cut(s)	129, 189, 223, 520, 939, 1234, 1713
BmtI	GCTAGC	1 cut(s)	1421
BmuI	ACTGGG	1 cut(s)	1534
BpiI	GAAGAC	3 cut(s)	761, 1721, 2017
BpmI	CTGGAG	2 cut(s)	891, 1593
BpuEI	CTTGAG	3 cut(s)	179, 902, 1812
BpuMI	CCSGG	1 cut(s)	1494
BsaHI	GRCGYC	3 cut(s)	20, 1758, 1911
BsaI	GGTCTC	3 cut(s)	134, 1186, 1304
BsaJI	CCNNGG	4 cut(s)	225, 797, 1023, 1434
Bsc4I	CCNNNNNNNGG	4 cut(s)	561, 723, 1298, 1480
Bse1I	ACTGG	2 cut(s)	1529, 1708
Bse3DI	GCAATG	2 cut(s)	1516, 1596
BseBI	CCWGG	1 cut(s)	1293
BseDI	CCNNGG	4 cut(s)	225, 797, 1023, 1434
BseGI	GGATG	3 cut(s)	214, 353, 1704
BseLI	CCNNNNNNNGG	4 cut(s)	561, 723, 1298, 1480
BseMI	GCAATG	2 cut(s)	1516, 1596
BseNI	ACTGG	2 cut(s)	1529, 1708
BseRI	GAGGAG	1 cut(s)	1136
BseSI	GKGCMC	1 cut(s)	1745
BseXI	GCAGC	5 cut(s)	208, 286, 676, 1417, 1519
BseYI	CCCAGC	1 cut(s)	971
BsgI	GTGCAG	2 cut(s)	675, 1323
Bsh1236I	CGCG	1 cut(s)	1128
Bsh1285I	CGRYCG	1 cut(s)	40
BshFI	GGCC	6 cut(s)	15, 80, 120, 245, 684, 1631
BshNI	GGYRCC	2 cut(s)	1288, 1742
BsiEI	CGRYCG	1 cut(s)	40
BsiHKAI	GWGCWC	1 cut(s)	1237
BsiHKCI	CYCGRG	1 cut(s)	561
BsiSI	CCGG	2 cut(s)	12, 1493
BslFI	GGGAC	3 cut(s)	289, 580, 1174
BslI	CCNNNNNNNGG	4 cut(s)	561, 723, 1298, 1480
BsmAI	GTCTC	5 cut(s)	134, 718, 1186, 1304, 1685
BsmFI	GGGAC	3 cut(s)	289, 580, 1174
BsmI	GAATGC	1 cut(s)	705
BsnI	GGCC	6 cut(s)	15, 80, 120, 245, 684, 1631
Bso31I	GGTCTC	3 cut(s)	134, 1186, 1304
BsoBI	CYCGRG	1 cut(s)	561
Bsp1286I	GDGCHC	2 cut(s)	1237, 1745
Bsp1407I	TGTACA	1 cut(s)	535
Bsp143I	GATC	8 cut(s)	238, 325, 1100, 1188, 1355, 1534, 1659, 1807
BspACI	CCGC	5 cut(s)	817, 830, 1178, 1314, 1628
BspANI	GGCC	6 cut(s)	15, 80, 120, 245, 684, 1631
BspFNI	CGCG	1 cut(s)	1128
BspHI	TCATGA	1 cut(s)	1240
BspLI	GGNNCC	4 cut(s)	1162, 1290, 1744, 1936
BspMAI	CTGCAG	2 cut(s)	304, 1108
BspOI	GCTAGC	1 cut(s)	1421
BspPI	GGATC	6 cut(s)	246, 1108, 1183, 1363, 1542, 1815
BspQI	GCTCTTC	1 cut(s)	1242
BspT107I	GGYRCC	2 cut(s)	1288, 1742
BspTNI	GGTCTC	3 cut(s)	134, 1186, 1304
BsrDI	GCAATG	2 cut(s)	1516, 1596
BsrGI	TGTACA	1 cut(s)	535
BsrI	ACTGG	2 cut(s)	1529, 1708
BssECI	CCNNGG	4 cut(s)	225, 797, 1023, 1434
BssMI	GATC	8 cut(s)	238, 325, 1100, 1188, 1355, 1534, 1659, 1807
BssNI	GRCGYC	3 cut(s)	20, 1758, 1911
BssSI	CACGAG	2 cut(s)	1359, 1783
BssT1I	CCWWGG	4 cut(s)	225, 797, 1023, 1434
Bst2BI	CACGAG	2 cut(s)	1359, 1783
Bst2UI	CCWGG	1 cut(s)	1293
Bst4CI	ACNGT	7 cut(s)	41, 50, 503, 957, 1285, 1368, 2028
Bst6I	CTCTTC	1 cut(s)	1242
BstACI	GRCGYC	3 cut(s)	20, 1758, 1911
BstAPI	GCANNNNNTGC	2 cut(s)	728, 1385
BstAUI	TGTACA	1 cut(s)	535
BstC8I	GCNNGC	7 cut(s)	318, 378, 394, 733, 1419, 1587, 1887
BstDEI	CTNAG	2 cut(s)	1193, 1564
BstENI	CCTNNNNNAGG	1 cut(s)	1296
BstF5I	GGATG	3 cut(s)	214, 353, 1704
BstFNI	CGCG	1 cut(s)	1128
BstHHI	GCGC	2 cut(s)	1014, 1128
BstKTI	GATC	8 cut(s)	241, 328, 1103, 1191, 1358, 1537, 1662, 1810
BstMAI	GTCTC	5 cut(s)	134, 718, 1186, 1304, 1685
BstMBI	GATC	8 cut(s)	238, 325, 1100, 1188, 1355, 1534, 1659, 1807
BstMCI	CGRYCG	1 cut(s)	40
BstNI	CCWGG	1 cut(s)	1293
BstNSI	RCATGY	3 cut(s)	396, 478, 1216
BstSCI	CCNGG	2 cut(s)	1291, 1492
BstSFI	CTRYAG	5 cut(s)	300, 953, 1104, 1254, 1443
BstSLI	GKGCMC	1 cut(s)	1745
BstUI	CGCG	1 cut(s)	1128
BstV1I	GCAGC	5 cut(s)	208, 286, 676, 1417, 1519
BstV2I	GAAGAC	3 cut(s)	761, 1721, 2017
BstX2I	RGATCY	4 cut(s)	238, 1100, 1355, 1534
BstYI	RGATCY	4 cut(s)	238, 1100, 1355, 1534
BsuRI	GGCC	6 cut(s)	15, 80, 120, 245, 684, 1631
BtrI	CACGTC	2 cut(s)	163, 992
BtsCI	GGATG	3 cut(s)	214, 353, 1704
BtsI	GCAGTG	1 cut(s)	1821
BtsIMutI	CAGTG	3 cut(s)	370, 508, 1821
Cac8I	GCNNGC	7 cut(s)	318, 378, 394, 733, 1419, 1587, 1887
CciI	TCATGA	1 cut(s)	1240
CfoI	GCGC	2 cut(s)	1014, 1128
Cfr13I	GGNCC	3 cut(s)	119, 1161, 1467
CseI	GACGC	3 cut(s)	28, 1747, 1919
CsiI	ACCWGGT	1 cut(s)	1291
Csp6I	GTAC	6 cut(s)	46, 230, 536, 576, 1289, 2024
CviAII	CATG	9 cut(s)	31, 393, 475, 629, 1016, 1213, 1241, 1657, 1804
CviQI	GTAC	6 cut(s)	46, 230, 536, 576, 1289, 2024
DdeI	CTNAG	2 cut(s)	1193, 1564
DpnI	GATC	8 cut(s)	240, 327, 1102, 1190, 1357, 1536, 1661, 1809
DpnII	GATC	8 cut(s)	238, 325, 1100, 1188, 1355, 1534, 1659, 1807
DriI	GACNNNNNGTC	1 cut(s)	1757
EaeI	YGGCCR	3 cut(s)	13, 243, 1629
Eam1104I	CTCTTC	1 cut(s)	1242
Eam1105I	GACNNNNNGTC	1 cut(s)	1757
EarI	CTCTTC	1 cut(s)	1242
EciI	GGCGGA	1 cut(s)	806
Ecl136II	GAGCTC	1 cut(s)	1235
Eco130I	CCWWGG	4 cut(s)	225, 797, 1023, 1434
Eco24I	GRGCYC	1 cut(s)	1237
Eco31I	GGTCTC	3 cut(s)	134, 1186, 1304
Eco32I	GATATC	2 cut(s)	28, 492
Eco47I	GGWCC	2 cut(s)	1161, 1467
Eco53kI	GAGCTC	1 cut(s)	1235
Eco57I	CTGAAG	2 cut(s)	734, 1644
Eco88I	CYCGRG	1 cut(s)	561
EcoICRI	GAGCTC	1 cut(s)	1235
EcoNI	CCTNNNNNAGG	1 cut(s)	1296
EcoO109I	RGGNCCY	1 cut(s)	1467
EcoRII	CCWGG	1 cut(s)	1291
EcoRV	GATATC	2 cut(s)	28, 492
EcoT14I	CCWWGG	4 cut(s)	225, 797, 1023, 1434
EcoT38I	GRGCYC	1 cut(s)	1237
ErhI	CCWWGG	4 cut(s)	225, 797, 1023, 1434
FaeI	CATG	9 cut(s)	34, 396, 478, 632, 1019, 1216, 1244, 1660, 1807
FalI	AAGNNNNNCTT	4 cut(s)	577, 609, 715, 747
FaqI	GGGAC	3 cut(s)	289, 580, 1174
FatI	CATG	9 cut(s)	30, 392, 474, 628, 1015, 1212, 1240, 1656, 1803
FbaI	TGATCA	1 cut(s)	1659
Fnu4HI	GCNGC	6 cut(s)	222, 300, 690, 1431, 1508, 1629
FokI	GGATG	3 cut(s)	201, 340, 1691
FriOI	GRGCYC	1 cut(s)	1237
Fsp4HI	GCNGC	6 cut(s)	222, 300, 690, 1431, 1508, 1629
FspBI	CTAG	9 cut(s)	203, 329, 452, 798, 1271, 1352, 1418, 1667, 1725
GlaI	GCGC	2 cut(s)	1013, 1127
GluI	GCNGC	6 cut(s)	222, 300, 690, 1431, 1508, 1629
GsaI	CCCAGC	1 cut(s)	975
GsuI	CTGGAG	2 cut(s)	891, 1593
HaeIII	GGCC	6 cut(s)	15, 80, 120, 245, 684, 1631
HapII	CCGG	2 cut(s)	12, 1493
HgaI	GACGC	3 cut(s)	28, 1747, 1919
HhaI	GCGC	2 cut(s)	1014, 1128
Hin1I	GRCGYC	3 cut(s)	20, 1758, 1911
Hin1II	CATG	9 cut(s)	34, 396, 478, 632, 1019, 1216, 1244, 1660, 1807
Hin6I	GCGC	2 cut(s)	1012, 1126
HinP1I	GCGC	2 cut(s)	1012, 1126
HindIII	AAGCTT	3 cut(s)	434, 1883, 1952
HpaII	CCGG	2 cut(s)	12, 1493
HphI	GGTGA	5 cut(s)	170, 338, 509, 1508, 1828
Hpy166II	GTNNAC	4 cut(s)	1364, 1819, 1909, 1975
Hpy188I	TCNGA	5 cut(s)	753, 888, 999, 1135, 1646
Hpy8I	GTNNAC	4 cut(s)	1364, 1819, 1909, 1975
HpyAV	CCTTC	3 cut(s)	418, 1061, 1955
HpyCH4III	ACNGT	7 cut(s)	41, 50, 503, 957, 1285, 1368, 2028
HpyCH4IV	ACGT	4 cut(s)	57, 162, 847, 991
HpyF3I	CTNAG	2 cut(s)	1193, 1564
HpySE526I	ACGT	4 cut(s)	57, 162, 847, 991
Hsp92I	GRCGYC	3 cut(s)	20, 1758, 1911
Hsp92II	CATG	9 cut(s)	34, 396, 478, 632, 1019, 1216, 1244, 1660, 1807
HspAI	GCGC	2 cut(s)	1012, 1126
KpnI	GGTACC	1 cut(s)	1292
Ksp22I	TGATCA	1 cut(s)	1659
Kzo9I	GATC	8 cut(s)	238, 325, 1100, 1188, 1355, 1534, 1659, 1807
LguI	GCTCTTC	1 cut(s)	1242
LmnI	GCTCC	6 cut(s)	182, 211, 802, 872, 1123, 1495
Lsp1109I	GCAGC	5 cut(s)	208, 286, 676, 1417, 1519
LweI	GCATC	7 cut(s)	129, 189, 223, 520, 939, 1234, 1713
MabI	ACCWGGT	1 cut(s)	1291
MaeI	CTAG	9 cut(s)	203, 329, 452, 798, 1271, 1352, 1418, 1667, 1725
MaeII	ACGT	4 cut(s)	57, 162, 847, 991
MaeIII	GTNAC	5 cut(s)	158, 163, 368, 497, 1496
MalI	GATC	8 cut(s)	240, 327, 1102, 1190, 1357, 1536, 1661, 1809
MboI	GATC	8 cut(s)	238, 325, 1100, 1188, 1355, 1534, 1659, 1807
MboII	GAAGA	9 cut(s)	102, 740, 766, 929, 1016, 1080, 1229, 1721, 2022
MfeI	CAATTG	1 cut(s)	1374
MflI	RGATCY	4 cut(s)	238, 1100, 1355, 1534
MhlI	GDGCHC	2 cut(s)	1237, 1745
MlyI	GAGTC	4 cut(s)	1261, 1433, 1584, 1970
MmeI	TCCRAC	1 cut(s)	247
MseI	TTAA	8 cut(s)	311, 612, 708, 864, 1557, 1848, 1878, 1947
MspI	CCGG	2 cut(s)	12, 1493
MspR9I	CCNGG	2 cut(s)	1293, 1494
MunI	CAATTG	1 cut(s)	1374
Mva1269I	GAATGC	1 cut(s)	705
MvaI	CCWGG	1 cut(s)	1293
MvnI	CGCG	1 cut(s)	1128
NciI	CCSGG	1 cut(s)	1494
NdeII	GATC	8 cut(s)	238, 325, 1100, 1188, 1355, 1534, 1659, 1807
NheI	GCTAGC	1 cut(s)	1417
NlaIII	CATG	9 cut(s)	34, 396, 478, 632, 1019, 1216, 1244, 1660, 1807
NlaIV	GGNNCC	4 cut(s)	1162, 1290, 1744, 1936
NmeAIII	GCCGAG	1 cut(s)	271
NmuCI	GTSAC	4 cut(s)	158, 163, 497, 1496
NspI	RCATGY	3 cut(s)	396, 478, 1216
PaeI	GCATGC	1 cut(s)	396
PagI	TCATGA	1 cut(s)	1240
PciSI	GCTCTTC	1 cut(s)	1242
PcsI	WCGNNNNNNNCGW	1 cut(s)	54
PctI	GAATGC	1 cut(s)	705
PfeI	GAWTC	6 cut(s)	745, 927, 1085, 1274, 1391, 1609
PkrI	GCNGC	6 cut(s)	223, 301, 691, 1432, 1509, 1630
PleI	GAGTC	4 cut(s)	1261, 1433, 1583, 1970
PpsI	GAGTC	4 cut(s)	1261, 1433, 1583, 1970
PpuMI	RGGWCCY	1 cut(s)	1467
PshBI	ATTAAT	1 cut(s)	612
Psp124BI	GAGCTC	1 cut(s)	1237
Psp5II	RGGWCCY	1 cut(s)	1467
Psp6I	CCWGG	1 cut(s)	1291
PspFI	CCCAGC	1 cut(s)	971
PspGI	CCWGG	1 cut(s)	1291
PspN4I	GGNNCC	4 cut(s)	1162, 1290, 1744, 1936
PspPI	GGNCC	3 cut(s)	119, 1161, 1467
PspPPI	RGGWCCY	1 cut(s)	1467
PsrI	GAACNNNNNNTAC	2 cut(s)	978, 1010
PstI	CTGCAG	2 cut(s)	304, 1108
PsuI	RGATCY	4 cut(s)	238, 1100, 1355, 1534
RsaI	GTAC	6 cut(s)	47, 231, 537, 577, 1290, 2025
RsaNI	GTAC	6 cut(s)	46, 230, 536, 576, 1289, 2024
SacI	GAGCTC	1 cut(s)	1237
SapI	GCTCTTC	1 cut(s)	1242
SaqAI	TTAA	8 cut(s)	311, 612, 708, 864, 1557, 1848, 1878, 1947
SatI	GCNGC	6 cut(s)	222, 300, 690, 1431, 1508, 1629
Sau3AI	GATC	8 cut(s)	238, 325, 1100, 1188, 1355, 1534, 1659, 1807
Sau96I	GGNCC	3 cut(s)	119, 1161, 1467
ScaI	AGTACT	1 cut(s)	2025
SchI	GAGTC	4 cut(s)	1261, 1433, 1584, 1970
ScrFI	CCNGG	2 cut(s)	1293, 1494
SduI	GDGCHC	2 cut(s)	1237, 1745
SexAI	ACCWGGT	1 cut(s)	1291
SfaNI	GCATC	7 cut(s)	129, 189, 223, 520, 939, 1234, 1713
SfcI	CTRYAG	5 cut(s)	300, 953, 1104, 1254, 1443
SinI	GGWCC	2 cut(s)	1161, 1467
SmlI	CTYRAG	3 cut(s)	194, 917, 1827
SmoI	CTYRAG	3 cut(s)	194, 917, 1827
SphI	GCATGC	1 cut(s)	396
SsiI	CCGC	5 cut(s)	817, 830, 1178, 1314, 1628
SspI	AATATT	1 cut(s)	616
SspMI	CTAG	9 cut(s)	203, 329, 452, 798, 1271, 1352, 1418, 1667, 1725
SstI	GAGCTC	1 cut(s)	1237
StyD4I	CCNGG	2 cut(s)	1291, 1492
StyI	CCWWGG	4 cut(s)	225, 797, 1023, 1434
TaaI	ACNGT	7 cut(s)	41, 50, 503, 957, 1285, 1368, 2028
TaiI	ACGT	4 cut(s)	60, 165, 850, 994
TaqI	TCGA	4 cut(s)	132, 482, 1277, 1863
TatI	WGTACW	2 cut(s)	535, 2023
TauI	GCSGC	1 cut(s)	1631
TfiI	GAWTC	6 cut(s)	745, 927, 1085, 1274, 1391, 1609
Tru1I	TTAA	8 cut(s)	311, 612, 708, 864, 1557, 1848, 1878, 1947
Tru9I	TTAA	8 cut(s)	311, 612, 708, 864, 1557, 1848, 1878, 1947
TscAI	CASTG	3 cut(s)	370, 508, 1828
TseFI	GTSAC	4 cut(s)	158, 163, 497, 1496
TseI	GCWGC	5 cut(s)	221, 299, 689, 1430, 1507
Tsp45I	GTSAC	4 cut(s)	158, 163, 497, 1496
TspDTI	ATGAA	5 cut(s)	587, 1125, 1229, 1692, 1792
TspRI	CASTG	3 cut(s)	370, 508, 1828
VpaK11BI	GGWCC	2 cut(s)	1161, 1467
VspI	ATTAAT	1 cut(s)	612
XagI	CCTNNNNNAGG	1 cut(s)	1296
XapI	RAATTY	2 cut(s)	342, 517
XbaI	TCTAGA	1 cut(s)	1270
XceI	RCATGY	3 cut(s)	396, 478, 1216
XcmI	CCANNNNNNNNNTGG	1 cut(s)	232
XmaJI	CCTAGG	1 cut(s)	797
XspI	CTAG	9 cut(s)	203, 329, 452, 798, 1271, 1352, 1418, 1667, 1725
ZrmI	AGTACT	1 cut(s)	2025

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.