RLG00000000016

NADH dehydrogenase (quinone) activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Unknown
OG0015812
Physical Location & Seq
Reverse (-)
101759 .. 105079
3321 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000016

Sequence Viewer

Length: 1692 bp
ATGGTGTGTAACGCCATTTTCCGGCGCTTTATCTTCCTTTCTTTCCTCGCAAAGGGGCTGTGTGCCCTTTTCTCGACTTTTTTTTGCCTTCTTTTGTCGCCGGAATGGAGCGGGTGGGAACTCATTCCGGCGGCCGTGCACCCACCTCTCTATCTTTCAATCGGCCCGGGATTGGGTCCGGACGCCCCCCCAGCGCCGGCCCCGGCGGTTATTCCCGATTTGAACGGGGCTCCGCCGCCGCTCATTCCGGATCTCAATGCCCCGGATCAGGCGGGGCTTGCGGAAGAGATAGAGGCAACCTGGGCGGCGCTCAGAGACACCCAGGAAGCGTTGGAGCGCCAGGAGGCGGAACTGAGCGCTTTCAAAGCTCAGCTCAATCATGAACGGCAACAAAGCGCAAAAATGGAACGTGAGTTCCGGGCTCTCACGGCCCGGATCGAATGGCAAGAGGAAAGGCAAGCTTTGTTGCTGCAGCAGCTAGCTCAGGCTAGTGGGGGCGCGCTTAGCGAAACGGTTTCCCCAGAGATCTTTATCATTAATGCAACCTTCATTTTGCTCATTCATGGAGTTGTATTTAGTACCTCTAAGAAATATGATTATCCACCGTTAGTCAGTAATGTGGGTTGGCTTGGATTACTTAGTGTTGCGCGCCTAGGAGGGCAGCGCGCTTTGGGATGCGGAGTAGCTATTATCGCCCAGCTCCCTAACCTAATGCGGCACCGGGTTCGGACCGCAGGGAACCGTAGCATGGGGGGGGCATCTAATCCTTTTGCCGCCGCAAGGCTGGCTAATCGTGAGGCGTCGGTCGGTCCTAGAAACGGCGGCAACGGCGCGAGGACCGGGAGGAAAGAAAGGGCGGTAGATGATAATGAAAAAGGGCGTCGTGTCGGCAGAATGGATGCGCGAAAGGCAATTGAGCTAGCCTATTCGTTATGGGGAATCGATGCTCCGGGCCGAATAGCGCTTACCTCCGGCACCTGGCTTTCTCCGGGCTTAGCTGCGCTTAATAGGCTGGTTTGGCTTCCTCTCTGGCGGCTTCCTTACCTTACCCACGCTACACTCCCACTCCAAGCTACGCCTGCTGAGAAAGATGCATTGCGATTTCCTCTTCTGTGGACGTACCGGAATATGATCCGGGACGGAAAGAGAAAGACTTTTTTCTCCGGCGGGCTTTCTCTCGTAAAGCCAAAGACGCCCCAAGACAAGGTTCCGCTAGTTCACGCAAATCCGAAGAAGTTATCACGGACGAGCCACATGCTAGGAAACTTGCACGTGTGGTTCTGGCCGGGCTTTCCTGAGGAGGGACAATTTTACATATTTCTGCCAAATCCTTCTATTATTAAGTACGGCTGGTACCATTTCGATGTGTTTCGATTCTTCCGAACAAGAGAGGGCGATCGATCTACATCTTTCCCCATAGCCCTGGGGCTGTGTCTCGATCTCCTACGTGCGAAATCCGAGGGACTAGTTCCTATGGGGATTCCCATTGGTCTAATTCCGCGCCTTATGACGAAAGGTGAGTCGGCGTGGCGTAAAGTGAAGATTGAGGGAAGTAGAGAAAAATTCCCTTCTGGGGTATTCCGAAGGTCCGAAGGGATCCAGTGCCCAACTACCGACTCCTCCCGGAATTGCGTTATCGGAGCCGAGCCAGGAATGGCCGTTAGTGGACACCCACCACTTTTCACCGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Proton_antipo_M

Protein Analysis

564

Amino Acids

61.99

Weight (kDa)

9.73

Isoelectric Point (pI)

43.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015812)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00285
fragaria_vesca FvH4_c1g00520
rosa_chinensis RchiOBHm_MTg0499211
rosa_laevigata RLG00000000016 RLG00000000081 RLG00000000123 RLG00000000367 RLG00000017272
rosa_multiflora Rmu_sc0000486.1_g000004
rosa_roxburghii Rroxscaffold_2G00119530 Rroxscaffold_2G00119540 Rroxscaffold_6G00392870
rosa_samantha Rh2BG107500 Rh2CG109300
rosa_wichuraiana Rw3G029490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1353
AccB1I GGYRCC 3 cut(s) 717, 974, 1353
AccBSI CCGCTC 2 cut(s) 111, 241
AccII CGCG 6 cut(s) 500, 649, 666, 833, 904, 1501
AccIII TCCGGA 2 cut(s) 178, 247
AclWI GGATC 6 cut(s) 258, 273, 443, 1126, 1591, 1604
AcoI YGGCCR 3 cut(s) 132, 1283, 1656
AcsI RAATTY 1 cut(s) 1562
AcvI CACGTG 1 cut(s) 1273
AcyI GRCGYC 4 cut(s) 183, 800, 880, 1193
AfaI GTAC 4 cut(s) 580, 1121, 1346, 1355
AfeI AGCGCT 2 cut(s) 358, 963
AflIII ACRYGT 1 cut(s) 1272
AgeI ACCGGT 1 cut(s) 1685
AgsI TTSAA 3 cut(s) 159, 223, 364
AhlI ACTAGT 1 cut(s) 1465
AjnI CCWGG 6 cut(s) 299, 321, 339, 977, 1422, 1648
AjuI GAANNNNNNNTTGG 2 cut(s) 1191, 1223
AloI GAACNNNNNNTCC 4 cut(s) 398, 399, 430, 431
Alw21I GWGCWC 1 cut(s) 141
Alw26I GTCTC 2 cut(s) 309, 1439
Alw44I GTGCAC 1 cut(s) 137
AlwI GGATC 6 cut(s) 258, 273, 443, 1126, 1591, 1604
Ama87I CYCGRG 1 cut(s) 166
Aor13HI TCCGGA 2 cut(s) 178, 247
Aor51HI AGCGCT 2 cut(s) 358, 963
AoxI GGCC 7 cut(s) 132, 163, 198, 429, 952, 1283, 1656
ApaLI GTGCAC 1 cut(s) 137
ApeKI GCWGC 5 cut(s) 469, 472, 475, 661, 998
ApoI RAATTY 1 cut(s) 1562
ArsI GACNNNNNNTTYG 2 cut(s) 1505, 1537
AseI ATTAAT 1 cut(s) 537
AsiGI ACCGGT 1 cut(s) 1685
Asp700I GAANNNNTTC 1 cut(s) 123
Asp718I GGTACC 1 cut(s) 1353
AspA2I CCTAGG 1 cut(s) 652
AspS9I GGNCC 9 cut(s) 164, 176, 199, 430, 729, 809, 837, 952, 1587
AsuHPI GGTGA 2 cut(s) 1529, 1675
AsuNHI GCTAGC 2 cut(s) 478, 919
AvaI CYCGRG 1 cut(s) 166
AvaII GGWCC 5 cut(s) 176, 729, 809, 837, 1587
AvrII CCTAGG 1 cut(s) 652
AxyI CCTNAGG 1 cut(s) 1296
BaeGI GKGCMC 3 cut(s) 67, 141, 1607
BamHI GGATCC 1 cut(s) 1596
BanI GGYRCC 3 cut(s) 717, 974, 1353
BanII GRGCYC 2 cut(s) 232, 424
BbrPI CACGTG 1 cut(s) 1273
Bbv12I GWGCWC 1 cut(s) 141
BbvI GCAGC 5 cut(s) 456, 484, 487, 673, 985
BceAI ACGGC 7 cut(s) 119, 401, 444, 835, 844, 1363, 1643
BcgI CGANNNNNNTGC 4 cut(s) 707, 741, 1237, 1271
BciT130I CCWGG 6 cut(s) 301, 323, 341, 979, 1424, 1650
BcoDI GTCTC 2 cut(s) 309, 1439
BcuI ACTAGT 1 cut(s) 1465
BfaI CTAG 8 cut(s) 479, 489, 653, 813, 920, 1214, 1259, 1466
BfmI CTRYAG 1 cut(s) 470
BfoI RGCGCY 6 cut(s) 28, 197, 311, 340, 360, 965
BglII AGATCT 1 cut(s) 525
BlnI CCTAGG 1 cut(s) 652
BlpI GCTNAGC 3 cut(s) 369, 503, 994
Bme18I GGWCC 5 cut(s) 176, 729, 809, 837, 1587
BmeT110I CYCGRG 1 cut(s) 166
BmgT120I GGNCC 9 cut(s) 164, 176, 199, 430, 729, 809, 837, 952, 1587
BmsI GCATC 5 cut(s) 665, 767, 889, 934, 1081
BmtI GCTAGC 2 cut(s) 482, 923
Bpu10I CCTNAGC 1 cut(s) 483
Bpu1102I GCTNAGC 3 cut(s) 369, 503, 994
Bsa29I ATCGAT 2 cut(s) 942, 1399
BsaAI YACGTR 2 cut(s) 1273, 1448
BsaBI GATNNNNATC 2 cut(s) 530, 1405
BsaHI GRCGYC 4 cut(s) 183, 800, 880, 1193
BsaJI CCNNGG 9 cut(s) 166, 201, 261, 300, 321, 652, 1422, 1423, 1458
BsaWI WCCGGW 4 cut(s) 178, 247, 1122, 1685
BsaXI ACNNNNNCTCC 2 cut(s) 1050, 1080
Bse118I RCCGGY 2 cut(s) 196, 1685
Bse1I ACTGG 1 cut(s) 1600
Bse21I CCTNAGG 1 cut(s) 1296
Bse3DI GCAATG 1 cut(s) 1094
Bse8I GATNNNNATC 2 cut(s) 530, 1405
BseAI TCCGGA 2 cut(s) 178, 247
BseBI CCWGG 6 cut(s) 301, 323, 341, 979, 1424, 1650
BseCI ATCGAT 2 cut(s) 942, 1399
BseDI CCNNGG 9 cut(s) 166, 201, 261, 300, 321, 652, 1422, 1423, 1458
BseGI GGATG 2 cut(s) 680, 904
BseJI GATNNNNATC 2 cut(s) 530, 1405
BseMI GCAATG 1 cut(s) 1094
BseMII CTCAG 6 cut(s) 325, 344, 383, 497, 1074, 1287
BseNI ACTGG 1 cut(s) 1600
BsePI GCGCGC 3 cut(s) 498, 647, 664
BseRI GAGGAG 2 cut(s) 1313, 1609
BseSI GKGCMC 3 cut(s) 67, 141, 1607
BseX3I CGGCCG 1 cut(s) 132
BseXI GCAGC 5 cut(s) 456, 484, 487, 673, 985
BseYI CCCAGC 2 cut(s) 190, 696
Bsh1236I CGCG 6 cut(s) 500, 649, 666, 833, 904, 1501
Bsh1285I CGRYCG 3 cut(s) 135, 807, 1399
BshFI GGCC 7 cut(s) 134, 165, 200, 431, 954, 1285, 1658
BshNI GGYRCC 3 cut(s) 717, 974, 1353
BshTI ACCGGT 1 cut(s) 1685
BshVI ATCGAT 2 cut(s) 942, 1399
BsiEI CGRYCG 3 cut(s) 135, 807, 1399
BsiHKAI GWGCWC 1 cut(s) 141
BsiHKCI CYCGRG 1 cut(s) 166
BslFI GGGAC 3 cut(s) 1151, 1317, 1476
BsmAI GTCTC 2 cut(s) 309, 1439
BsmFI GGGAC 3 cut(s) 1151, 1317, 1476
BsnI GGCC 7 cut(s) 134, 165, 200, 431, 954, 1285, 1658
BsoBI CYCGRG 1 cut(s) 166
Bsp1286I GDGCHC 5 cut(s) 67, 141, 232, 424, 1607
Bsp13I TCCGGA 2 cut(s) 178, 247
Bsp143I GATC 9 cut(s) 250, 265, 435, 525, 1131, 1396, 1400, 1438, 1596
Bsp1720I GCTNAGC 3 cut(s) 369, 503, 994
BspANI GGCC 7 cut(s) 134, 165, 200, 431, 954, 1285, 1658
BspCNI CTCAG 6 cut(s) 324, 345, 382, 496, 1075, 1288
BspDI ATCGAT 2 cut(s) 942, 1399
BspEI TCCGGA 2 cut(s) 178, 247
BspFNI CGCG 6 cut(s) 500, 649, 666, 833, 904, 1501
BspHI TCATGA 1 cut(s) 379
BspMAI CTGCAG 1 cut(s) 474
BspOI GCTAGC 2 cut(s) 482, 923
BspPI GGATC 6 cut(s) 258, 273, 443, 1126, 1591, 1604
BspT107I GGYRCC 3 cut(s) 717, 974, 1353
BsrBI CCGCTC 2 cut(s) 111, 241
BsrDI GCAATG 1 cut(s) 1094
BsrFI RCCGGY 2 cut(s) 196, 1685
BsrI ACTGG 1 cut(s) 1600
BssAI RCCGGY 2 cut(s) 196, 1685
BssECI CCNNGG 9 cut(s) 166, 201, 261, 300, 321, 652, 1422, 1423, 1458
BssHII GCGCGC 3 cut(s) 498, 647, 664
BssMI GATC 9 cut(s) 250, 265, 435, 525, 1131, 1396, 1400, 1438, 1596
BssNI GRCGYC 4 cut(s) 183, 800, 880, 1193
BssT1I CCWWGG 1 cut(s) 652
Bst2UI CCWGG 6 cut(s) 301, 323, 341, 979, 1424, 1650
Bst4CI ACNGT 3 cut(s) 514, 606, 743
Bst6I CTCTTC 2 cut(s) 279, 1113
BstACI GRCGYC 4 cut(s) 183, 800, 880, 1193
BstBAI YACGTR 2 cut(s) 1273, 1448
BstENI CCTNNNNNAGG 1 cut(s) 50
BstF5I GGATG 2 cut(s) 680, 904
BstFNI CGCG 6 cut(s) 500, 649, 666, 833, 904, 1501
BstH2I RGCGCY 6 cut(s) 28, 197, 311, 340, 360, 965
BstKTI GATC 9 cut(s) 253, 268, 438, 528, 1134, 1399, 1403, 1441, 1599
BstMAI GTCTC 2 cut(s) 309, 1439
BstMBI GATC 9 cut(s) 250, 265, 435, 525, 1131, 1396, 1400, 1438, 1596
BstMCI CGRYCG 3 cut(s) 135, 807, 1399
BstNI CCWGG 6 cut(s) 301, 323, 341, 979, 1424, 1650
BstNSI RCATGY 1 cut(s) 1258
BstSFI CTRYAG 1 cut(s) 470
BstSLI GKGCMC 3 cut(s) 67, 141, 1607
BstUI CGCG 6 cut(s) 500, 649, 666, 833, 904, 1501
BstV1I GCAGC 5 cut(s) 456, 484, 487, 673, 985
BstX2I RGATCY 3 cut(s) 250, 525, 1596
BstXI CCANNNNNNTGG 1 cut(s) 1423
BstYI RGATCY 3 cut(s) 250, 525, 1596
BstZI CGGCCG 1 cut(s) 132
Bsu15I ATCGAT 2 cut(s) 942, 1399
Bsu36I CCTNAGG 1 cut(s) 1296
BsuRI GGCC 7 cut(s) 134, 165, 200, 431, 954, 1285, 1658
BsuTUI ATCGAT 2 cut(s) 942, 1399
BtsCI GGATG 2 cut(s) 680, 904
BtsIMutI CAGTG 1 cut(s) 1607
CciI TCATGA 1 cut(s) 379
Cfr10I RCCGGY 2 cut(s) 196, 1685
Cfr13I GGNCC 9 cut(s) 164, 176, 199, 430, 729, 809, 837, 952, 1587
Cfr9I CCCGGG 1 cut(s) 166
ClaI ATCGAT 2 cut(s) 942, 1399
CpoI CGGWCCG 1 cut(s) 729
CseI GACGC 4 cut(s) 191, 789, 869, 1201
Csp6I GTAC 4 cut(s) 579, 1120, 1345, 1354
CspAI ACCGGT 1 cut(s) 1685
CspI CGGWCCG 1 cut(s) 729
CviAII CATG 4 cut(s) 380, 563, 748, 1255
CviQI GTAC 4 cut(s) 579, 1120, 1345, 1354
DpnI GATC 9 cut(s) 252, 267, 437, 527, 1133, 1398, 1402, 1440, 1598
DpnII GATC 9 cut(s) 250, 265, 435, 525, 1131, 1396, 1400, 1438, 1596
EaeI YGGCCR 3 cut(s) 132, 1283, 1656
EagI CGGCCG 1 cut(s) 132
Eam1104I CTCTTC 2 cut(s) 279, 1113
EarI CTCTTC 2 cut(s) 279, 1113
EciI GGCGGA 2 cut(s) 222, 362
EclXI CGGCCG 1 cut(s) 132
Eco130I CCWWGG 1 cut(s) 652
Eco24I GRGCYC 2 cut(s) 232, 424
Eco47I GGWCC 5 cut(s) 176, 729, 809, 837, 1587
Eco47III AGCGCT 2 cut(s) 358, 963
Eco52I CGGCCG 1 cut(s) 132
Eco72I CACGTG 1 cut(s) 1273
Eco81I CCTNAGG 1 cut(s) 1296
Eco88I CYCGRG 1 cut(s) 166
EcoNI CCTNNNNNAGG 1 cut(s) 50
EcoRII CCWGG 6 cut(s) 299, 321, 339, 977, 1422, 1648
EcoT14I CCWWGG 1 cut(s) 652
EcoT22I ATGCAT 1 cut(s) 1096
EcoT38I GRGCYC 2 cut(s) 232, 424
ErhI CCWWGG 1 cut(s) 652
FaeI CATG 4 cut(s) 383, 566, 751, 1258
FalI AAGNNNNNCTT 2 cut(s) 445, 477
FaqI GGGAC 3 cut(s) 1151, 1317, 1476
FatI CATG 4 cut(s) 379, 562, 747, 1254
FauI CCCGC 3 cut(s) 104, 265, 1160
FokI GGATG 2 cut(s) 687, 911
FriOI GRGCYC 2 cut(s) 232, 424
FspBI CTAG 8 cut(s) 479, 489, 653, 813, 920, 1214, 1259, 1466
GsaI CCCAGC 2 cut(s) 194, 700
HaeII RGCGCY 6 cut(s) 28, 197, 311, 340, 360, 965
HaeIII GGCC 7 cut(s) 134, 165, 200, 431, 954, 1285, 1658
HgaI GACGC 4 cut(s) 191, 789, 869, 1201
Hin1I GRCGYC 4 cut(s) 183, 800, 880, 1193
Hin1II CATG 4 cut(s) 383, 566, 751, 1258
HindIII AAGCTT 1 cut(s) 459
HinfI GANTC 5 cut(s) 939, 1374, 1480, 1520, 1616
HphI GGTGA 2 cut(s) 1529, 1675
Hpy166II GTNNAC 4 cut(s) 139, 1116, 1219, 1667
Hpy188I TCNGA 8 cut(s) 314, 729, 1230, 1382, 1459, 1583, 1591, 1640
Hpy188III TCNNGA 8 cut(s) 73, 179, 215, 248, 380, 794, 1295, 1436
Hpy8I GTNNAC 4 cut(s) 139, 1116, 1219, 1667
Hpy99I CGWCG 2 cut(s) 805, 885
HpyAV CCTTC 6 cut(s) 98, 556, 1341, 1578, 1578, 1586
HpyCH4III ACNGT 3 cut(s) 514, 606, 743
HpyCH4IV ACGT 4 cut(s) 409, 1118, 1272, 1447
HpyCH4V TGCA 5 cut(s) 139, 472, 542, 1094, 1270
HpySE526I ACGT 4 cut(s) 409, 1118, 1272, 1447
Hsp92I GRCGYC 4 cut(s) 183, 800, 880, 1193
Hsp92II CATG 4 cut(s) 383, 566, 751, 1258
Kpn2I TCCGGA 2 cut(s) 178, 247
KpnI GGTACC 1 cut(s) 1357
KroI GCCGGC 1 cut(s) 196
KroNI GCCGGC 1 cut(s) 198
Kzo9I GATC 9 cut(s) 250, 265, 435, 525, 1131, 1396, 1400, 1438, 1596
LmnI GCTCC 6 cut(s) 108, 235, 334, 705, 952, 1640
Lsp1109I GCAGC 5 cut(s) 456, 484, 487, 673, 985
LweI GCATC 5 cut(s) 665, 767, 889, 934, 1081
MaeI CTAG 8 cut(s) 479, 489, 653, 813, 920, 1214, 1259, 1466
MaeII ACGT 4 cut(s) 409, 1118, 1272, 1447
MaeIII GTNAC 1 cut(s) 8
MalI GATC 9 cut(s) 252, 267, 437, 527, 1133, 1398, 1402, 1440, 1598
MbiI CCGCTC 2 cut(s) 111, 241
MboI GATC 9 cut(s) 250, 265, 435, 525, 1131, 1396, 1400, 1438, 1596
MboII GAAGA 6 cut(s) 25, 296, 1100, 1243, 1369, 1552
MfeI CAATTG 1 cut(s) 912
MflI RGATCY 3 cut(s) 250, 525, 1596
MhlI GDGCHC 5 cut(s) 67, 141, 232, 424, 1607
MluCI AATT 5 cut(s) 912, 1307, 1494, 1562, 1627
MlyI GAGTC 2 cut(s) 1529, 1610
MmeI TCCRAC 1 cut(s) 312
Mph1103I ATGCAT 1 cut(s) 1096
MroI TCCGGA 2 cut(s) 178, 247
MroNI GCCGGC 1 cut(s) 196
MroXI GAANNNNTTC 1 cut(s) 123
MseI TTAA 3 cut(s) 537, 1005, 1341
MslI CAYNNNNRTG 1 cut(s) 1362
MunI CAATTG 1 cut(s) 912
MvaI CCWGG 6 cut(s) 301, 323, 341, 979, 1424, 1650
MvnI CGCG 6 cut(s) 500, 649, 666, 833, 904, 1501
NaeI GCCGGC 1 cut(s) 198
NdeII GATC 9 cut(s) 250, 265, 435, 525, 1131, 1396, 1400, 1438, 1596
NgoMIV GCCGGC 1 cut(s) 196
NheI GCTAGC 2 cut(s) 478, 919
NlaIII CATG 4 cut(s) 383, 566, 751, 1258
NmeAIII GCCGAG 1 cut(s) 1669
NsiI ATGCAT 1 cut(s) 1096
NspI RCATGY 1 cut(s) 1258
PagI TCATGA 1 cut(s) 379
PasI CCCWGGG 1 cut(s) 1423
PauI GCGCGC 3 cut(s) 498, 647, 664
PcsI WCGNNNNNNNCGW 1 cut(s) 1378
PdiI GCCGGC 1 cut(s) 198
PdmI GAANNNNTTC 1 cut(s) 123
PfeI GAWTC 3 cut(s) 939, 1374, 1480
PfoI TCCNGGA 2 cut(s) 1134, 1622
PinAI ACCGGT 1 cut(s) 1685
Ple19I CGATCG 1 cut(s) 1399
PleI GAGTC 2 cut(s) 1528, 1610
PmaCI CACGTG 1 cut(s) 1273
PmlI CACGTG 1 cut(s) 1273
PpsI GAGTC 2 cut(s) 1528, 1610
Ppu21I YACGTR 2 cut(s) 1273, 1448
PshBI ATTAAT 1 cut(s) 537
Psp6I CCWGG 6 cut(s) 299, 321, 339, 977, 1422, 1648
PspCI CACGTG 1 cut(s) 1273
PspFI CCCAGC 2 cut(s) 190, 696
PspGI CCWGG 6 cut(s) 299, 321, 339, 977, 1422, 1648
PspPI GGNCC 9 cut(s) 164, 176, 199, 430, 729, 809, 837, 952, 1587
PstI CTGCAG 1 cut(s) 474
PsuI RGATCY 3 cut(s) 250, 525, 1596
PteI GCGCGC 3 cut(s) 498, 647, 664
PvuI CGATCG 1 cut(s) 1399
RsaI GTAC 4 cut(s) 580, 1121, 1346, 1355
RsaNI GTAC 4 cut(s) 579, 1120, 1345, 1354
RseI CAYNNNNRTG 1 cut(s) 1362
Rsr2I CGGWCCG 1 cut(s) 729
RsrII CGGWCCG 1 cut(s) 729
SaqAI TTAA 3 cut(s) 537, 1005, 1341
Sau3AI GATC 9 cut(s) 250, 265, 435, 525, 1131, 1396, 1400, 1438, 1596
Sau96I GGNCC 9 cut(s) 164, 176, 199, 430, 729, 809, 837, 952, 1587
SchI GAGTC 2 cut(s) 1529, 1610
SduI GDGCHC 5 cut(s) 67, 141, 232, 424, 1607
SfaNI GCATC 5 cut(s) 665, 767, 889, 934, 1081
SfcI CTRYAG 1 cut(s) 470
SinI GGWCC 5 cut(s) 176, 729, 809, 837, 1587
SmaI CCCGGG 1 cut(s) 168
SmiMI CAYNNNNRTG 1 cut(s) 1362
SpeI ACTAGT 1 cut(s) 1465
Sse9I AATT 5 cut(s) 912, 1307, 1494, 1562, 1627
SspMI CTAG 8 cut(s) 479, 489, 653, 813, 920, 1214, 1259, 1466
StyI CCWWGG 1 cut(s) 652
TaaI ACNGT 3 cut(s) 514, 606, 743
TaiI ACGT 4 cut(s) 412, 1121, 1275, 1450
TaqI TCGA 7 cut(s) 74, 438, 942, 1362, 1372, 1399, 1437
TaqII GACCGA 2 cut(s) 793, 797
TasI AATT 5 cut(s) 912, 1307, 1494, 1562, 1627
TauI GCSGC 9 cut(s) 134, 238, 241, 308, 718, 776, 779, 825, 1036
TfiI GAWTC 3 cut(s) 939, 1374, 1480
Tru1I TTAA 3 cut(s) 537, 1005, 1341
Tru9I TTAA 3 cut(s) 537, 1005, 1341
TscAI CASTG 1 cut(s) 1607
TseI GCWGC 5 cut(s) 469, 472, 475, 661, 998
TspDTI ATGAA 4 cut(s) 396, 538, 551, 885
TspGWI ACGGA 2 cut(s) 1155, 1258
TspMI CCCGGG 1 cut(s) 166
TspRI CASTG 1 cut(s) 1607
VneI GTGCAC 1 cut(s) 137
VpaK11BI GGWCC 5 cut(s) 176, 729, 809, 837, 1587
VspI ATTAAT 1 cut(s) 537
XagI CCTNNNNNAGG 1 cut(s) 50
XapI RAATTY 1 cut(s) 1562
XceI RCATGY 1 cut(s) 1258
XmaI CCCGGG 1 cut(s) 166
XmaJI CCTAGG 1 cut(s) 652
XmnI GAANNNNTTC 1 cut(s) 123
XspI CTAG 8 cut(s) 479, 489, 653, 813, 920, 1214, 1259, 1466
Zsp2I ATGCAT 1 cut(s) 1096
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.